28 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 12 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 4 Archaea Euryarchaeota YLA114 32 Bacteria Proteobacteria Spirochaetes Spirochaetales Spirochaetaceae Treponema 8 Bacteria Cyanobacteria Chloroplast Chlorophyta Ulvophyceae 864 Bacteria Actinobacteria Acidimicrobiia Acidimicrobiales OCS155 29 Bacteria Actinobacteria Acidimicrobiia Acidimicrobiales wb1_P06 14 Bacteria Actinobacteria Acidimicrobiia Acidimicrobiales 4839 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 166 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium 21 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae HTCC2207 329 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Cryomorphaceae 10099 Bacteria Cyanobacteria Synechococcophycideae Synechococcales Synechococcaceae Prochlorococcus 605 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 4 Bacteria Proteobacteria Deltaproteobacteria Bdellovibrionales Bacteriovoracaceae Bacteriovorax 1048 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Cryomorphaceae 2561 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 4919 Bacteria Cyanobacteria Synechococcophycideae Synechococcales Synechococcaceae Synechococcus 36 Bacteria Verrucomicrobia Opitutae Puniceicoccales Puniceicoccaceae Coraliomargarita 2628 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Cryomorphaceae 1063 Bacteria Proteobacteria Alphaproteobacteria 6 Bacteria Proteobacteria Deltaproteobacteria Myxococcales OM27 122 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 3 Bacteria Bacteroidetes Cytophagia Cytophagales Flammeovirgaceae 2969 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 13 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 806 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 383 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales 275 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Oceanospirillaceae 249 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 6 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 96 Bacteria Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Vibrio 259 Bacteria Proteobacteria Alphaproteobacteria 9 Bacteria Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobulbaceae Desulfotalea 70 Bacteria SAR406 AB16 Arctic96B A714017 SGSH944 573 Bacteria Proteobacteria Alphaproteobacteria 156 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 47 Bacteria Cyanobacteria Synechococcophycideae Synechococcales Synechococcaceae Synechococcus 17 Bacteria Cyanobacteria Chloroplast Stramenopiles 251 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales 11 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 82 Archaea Euryarchaeota Thermoplasmata E2 Marine_group_III 7 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingobium 4 Bacteria Proteobacteria Gammaproteobacteria Legionellales 15 Bacteria Proteobacteria Alphaproteobacteria 159 Bacteria Cyanobacteria Chloroplast Haptophyceae 488 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 52 Bacteria Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae 12 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Cryomorphaceae 19 Bacteria Proteobacteria Alphaproteobacteria Kiloniellales 13 Bacteria Cyanobacteria Chloroplast Stramenopiles 27 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 732 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales OM60 357 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 92 Bacteria Proteobacteria Betaproteobacteria MWH 92 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 8 Bacteria Proteobacteria Gammaproteobacteria Legionellales 126 Archaea Euryarchaeota Thermoplasmata E2 Marine_group_II 593 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 535 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 6 Bacteria Proteobacteria Deltaproteobacteria Myxococcales Cystobacterineae 27 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales 12 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Rhodovulum 249 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 127 Bacteria Proteobacteria Alphaproteobacteria 33 Bacteria SAR406 AB16 Arctic96B A714017 SargSea 303 Bacteria SAR406 AB16 Arctic96B A714017 ZA3312c 38 Bacteria Proteobacteria Alphaproteobacteria 503 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium 4 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Glaciecola 10 Bacteria Proteobacteria Alphaproteobacteria 23 Bacteria Verrucomicrobia Opitutae Puniceicoccales Puniceicoccaceae MB11C04 13 Bacteria BHI80 103 Bacteria Cyanobacteria Chloroplast Stramenopiles 306 Bacteria Proteobacteria Alphaproteobacteria 192 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 184 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 7 Bacteria Cyanobacteria Chloroplast Stramenopiles 39 Bacteria Bacteroidetes 27 Bacteria Proteobacteria Gammaproteobacteria Chromatiales Ectothiorhodospiraceae 238 Bacteria Bacteroidetes Cytophagia Cytophagales Flammeovirgaceae 3 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales 12 Bacteria Proteobacteria Deltaproteobacteria 10 Bacteria GN02 3BR 51 Bacteria Cyanobacteria Chloroplast Haptophyceae 186 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Cryomorphaceae 32 Bacteria Cyanobacteria Chloroplast Stramenopiles 8 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 12 Bacteria Bacteroidetes Balneola 6 Bacteria Cyanobacteria Chloroplast Stramenopiles 7 Bacteria Proteobacteria Gammaproteobacteria Legionellales Endoecteinascidiaceae 970 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 50 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 134 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 28 Bacteria Chloroflexi SAR202 10 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 5 Bacteria Proteobacteria Gammaproteobacteria Legionellales 36 Bacteria Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae 94 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 559 Bacteria Proteobacteria Alphaproteobacteria 5 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Candidatus_Endobugula 5 Bacteria Proteobacteria Gammaproteobacteria HTCC2188 HTCC2089 391 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 20 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 30 Bacteria Proteobacteria Gammaproteobacteria HTCC2188 HTCC2089 146 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 1859 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 85 Bacteria Proteobacteria Alphaproteobacteria 201 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 31 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae 62 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales NS9 162 Bacteria Proteobacteria Alphaproteobacteria 3 Bacteria Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae Methylophaga 17 Bacteria Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Vibrio 62 Bacteria Cyanobacteria Chloroplast Stramenopiles 3 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 241 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales AEGEAN_112 112 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales AEGEAN_112 3 Bacteria Bacteroidetes Cytophagia Cytophagales Flammeovirgaceae 29 Bacteria Proteobacteria Deltaproteobacteria Sva0853 10 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Hyphomonadaceae 46 Bacteria Proteobacteria Gammaproteobacteria HTCC2188 15 Bacteria Cyanobacteria Chloroplast Stramenopiles 131 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales OM60 17 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 90 Bacteria Proteobacteria Gammaproteobacteria HTCC2188 HTCC2089 15 Archaea Euryarchaeota Thermoplasmata E2 Marine_group_II 202 Bacteria Cyanobacteria Oscillatoriophycideae Oscillatoriales Phormidiaceae Trichodesmium 5 Bacteria Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae Desulfococcus 6 Bacteria SBR1093 A712011 62 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 105 Archaea Euryarchaeota Thermoplasmata E2 Marine_group_II 97 Archaea Euryarchaeota Thermoplasmata E2 Marine_group_II 116 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae HTCC2207 96 Bacteria Proteobacteria Alphaproteobacteria 19 Bacteria Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Photobacterium 5 Bacteria Bacteroidetes Cytophagia Cytophagales Flammeovirgaceae Flammeovirga 5 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 17 Bacteria Proteobacteria Betaproteobacteria 26 Bacteria SAR406 AB16 Arctic96B A714017 SGSH944 80 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales 143 Bacteria Proteobacteria Alphaproteobacteria Kiloniellales 115 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium 5 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 12 Bacteria Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Photobacterium Photobacterium_damselae 6 Bacteria Cyanobacteria Chloroplast Stramenopiles 3 Bacteria Proteobacteria Gammaproteobacteria Chromatiales Chromatiaceae 11 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 8 Bacteria Cyanobacteria Chloroplast Stramenopiles 196 Bacteria Proteobacteria Gammaproteobacteria Chromatiales 6 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 706 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 38 Bacteria Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Photobacterium 13 Archaea Euryarchaeota Thermoplasmata E2 Marine_group_II 8 Bacteria Proteobacteria Deltaproteobacteria Myxococcales OM27 42 Bacteria SAR406 AB16 Arctic96B A714017 SGSH944 4 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 3 Bacteria Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Photobacterium Photobacterium_damselae 31 Bacteria Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae 7 Bacteria Bacteroidetes Saprospiraceae 9 Bacteria Verrucomicrobia Verruco R76 5 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae 6 Bacteria Bacteroidetes Bacteroidia Bacteroidales 6 Bacteria Proteobacteria Gammaproteobacteria Bacillales 163 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium 82 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae 116 Bacteria Planctomycetes Phycisphaerae Phycisphaerales 10 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 7 Bacteria Cyanobacteria Chloroplast Cryptophyta 105 Bacteria SAR406 AB16 Arctic96B A714017 SGSH944 14 Archaea Euryarchaeota Thermoplasmata E2 Marine_group_II 3 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Oleiphilaceae 23 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 11 Bacteria Proteobacteria Deltaproteobacteria Myxococcales OM27 4 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 11 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Arcobacter 117 Bacteria Proteobacteria Alphaproteobacteria 3 Bacteria Cyanobacteria 4C0d SM2F09 15 Bacteria Verrucomicrobia Verruco R76 4 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 96 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales NS9 59 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 29 Bacteria Proteobacteria Alphaproteobacteria 6 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 18 Bacteria Proteobacteria Deltaproteobacteria Myxococcales Cystobacterineae 62 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 4 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Arcobacter 3 Bacteria OP3 PBS 3 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Alteromonadaceae 4 Bacteria Bacteroidetes Saprospiraceae 6 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 5 Bacteria Proteobacteria Deltaproteobacteria Myxococcales OM27 3 Bacteria Cyanobacteria Chloroplast Stramenopiles 3 Bacteria Cyanobacteria Chloroplast Stramenopiles 8 Bacteria Bacteroidetes Cytophagia Cytophagales Flammeovirgaceae Persicobacter Persicobacter_diffluens 29 Bacteria Cyanobacteria Chloroplast Stramenopiles 22 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter Acinetobacter_rhizosphaerae 30 Bacteria SBR1093 A712011 39 Bacteria Cyanobacteria Oscillatoriophycideae Oscillatoriales Phormidiaceae Trichodesmium 14 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium 131 Bacteria Proteobacteria Alphaproteobacteria Rhizobiales 5 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Glaciecola 14 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 58 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 16 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 4 Bacteria Proteobacteria Alphaproteobacteria BD7 90 Bacteria Proteobacteria Alphaproteobacteria 276 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 5 Bacteria Planctomycetes Planctomycetia Pirellulales Pirellulaceae 4 Bacteria Proteobacteria Deltaproteobacteria Desulfuromonadales 3 Bacteria Planctomycetes vadinHA49 7 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales 74 Bacteria Proteobacteria Alphaproteobacteria 6 Bacteria Cyanobacteria Synechococcophycideae Synechococcales Synechococcaceae Synechococcus 9 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 4 Bacteria Bacteroidetes Saprospiraceae 5 Bacteria Proteobacteria Deltaproteobacteria PB19 4 Bacteria Cyanobacteria Chloroplast Stramenopiles 34 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Cryomorphaceae Fluviicola 13 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales AEGEAN_112 54 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales HTCC2188 HTCC 16 Bacteria Proteobacteria Deltaproteobacteria PB19 3 Bacteria Cyanobacteria Chloroplast Stramenopiles 9 Bacteria Proteobacteria Deltaproteobacteria Myxococcales OM27 7 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales 77 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 6 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales 57 Bacteria SAR406 AB16 Arctic96B A714017 SargSea 3 Bacteria Proteobacteria Deltaproteobacteria Bdellovibrionales Bacteriovoracaceae Bacteriovorax 8 Bacteria Proteobacteria Deltaproteobacteria Myxococcales OM27 34 Bacteria Planctomycetes OM190 CL500 8 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales NS9 12 Bacteria Proteobacteria Alphaproteobacteria Kiloniellales 8 Bacteria Proteobacteria Deltaproteobacteria Myxococcales OM27 50 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 7 Bacteria Cyanobacteria Chloroplast Haptophyceae 198 Bacteria Proteobacteria Deltaproteobacteria Sva0853 5 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae 4 Bacteria Verrucomicrobia Arctic97B 5 Bacteria Proteobacteria Alphaproteobacteria 4 Bacteria Verrucomicrobia Opitutae Puniceicoccales Puniceicoccaceae Coraliomargarita 55 Bacteria Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae 7 Bacteria Cyanobacteria Chloroplast Haptophyceae 8 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales 28 Bacteria Proteobacteria Alphaproteobacteria 7 Bacteria Planctomycetes OM190 agg27 48 Bacteria Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae 31 Bacteria Actinobacteria Actinobacteria Actinomycetales 56 Bacteria Planctomycetes Planctomycetia Pirellulales Pirellulaceae 7 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae 9 Bacteria Verrucomicrobia Verrucomicrobiae Verrucomicrobiales Verrucomicrobiaceae Verrucomicrobium 18 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae 55 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 27 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 25 Bacteria Proteobacteria Alphaproteobacteria 10 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Glaciecola 41 Bacteria Bacteroidetes Balneola 10 Bacteria Proteobacteria Gammaproteobacteria Vibrionales Pseudoalteromonadaceae Pseudoalteromonas 13 Bacteria Proteobacteria Deltaproteobacteria Myxococcales OM27 30 Archaea Euryarchaeota Thermoplasmata E2 Marine_group_II 7 Bacteria SAR406 AB16 Arctic96B A714017 SGSH944 14 Bacteria Bacteroidetes Bacteroidia Bacteroidales 14 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Endozoicimonaceae 23 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 6 Bacteria Planctomycetes Planctomycetia Pirellulales Pirellulaceae 3 Bacteria Cyanobacteria Chloroplast Haptophyceae 30 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales AEGEAN_112 28 Bacteria ZB3 BS119 31 Bacteria ZB3 BS119 5 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 27 Bacteria ZB3 BS119 10 Bacteria Proteobacteria Deltaproteobacteria Bdellovibrionales Bacteriovoracaceae 144 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Cryomorphaceae 4 Bacteria ZB3 BS119 33 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Fusobacteriaceae Propionigenium 4 Bacteria Firmicutes Clostridia Clostridiales Aquificaceae 13 Bacteria Bacteroidetes Saprospiraceae Saprospira 4 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium 12 Bacteria Cyanobacteria Chloroplast Stramenopiles 15 Bacteria ZB3 BS119 5 Bacteria ZB3 BS119