8 Archaea Euryarchaeota YLA114 3 Archaea YLA114 37 Archaea Crenarchaeota MBGB 10 Archaea Euryarchaeota Methanomicrobia DHVE3 9 Archaea Euryarchaeota Methanobacteria Methanobacteriales pMC1 pMC1A4 18 Archaea YLA114 121 Archaea Crenarchaeota MBGB 6 Archaea YLA114 7 Archaea YLA114 7 Archaea YLA114 15 Archaea YLA114 10 Archaea YLA114 8 Archaea Crenarchaeota 19 Archaea Crenarchaeota MBGB 7 Archaea YLA114 19 Archaea Crenarchaeota MBGB 14 Archaea YLA114 14 Archaea YLA114 9 Archaea 3478 Archaea Crenarchaeota AAG 8 Archaea YLA114 16 Archaea Crenarchaeota MCG 23 Archaea YLA114 5 Archaea Euryarchaeota YLA114 86 Archaea YLA114 8 Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina 57 Archaea YLA114 13 Archaea YLA114 7 Archaea YLA114 55 Archaea YLA114 12 Archaea Crenarchaeota MCG 8 Archaea YLA114 7 Archaea YLA114 23 Archaea YLA114 44 Bacteria YLA114 15 Archaea YLA114 11 Archaea YLA114 22 Archaea YLA114 66 Archaea YLA114 6 Archaea YLA114 46 Archaea YLA114 10 Archaea YLA114 125 Archaea YLA114 16 Archaea YLA114 22 Archaea Euryarchaeota Thermoplasmata Thermoplasmatales 31 Archaea YLA114 78 Archaea YLA114 18 Archaea Euryarchaeota YLA114 6 Archaea YLA114 52 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 9 Archaea YLA114 17 Archaea YLA114 18 Archaea Euryarchaeota DSEG E2 75 Archaea Euryarchaeota DSEG ArcA07 9 Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus 14 Archaea YLA114 12 Archaea Euryarchaeota DSEG 104A5 13 Archaea YLA114 4 Archaea Euryarchaeota DSEG ArcA07 5 Archaea YLA114 35 Archaea YLA114 63 Archaea YLA114 23 Bacteria Euryarchaeota Clostridia Halobacteriales Halobacteriaceae Halorubrum 8 Archaea YLA114 11 Archaea YLA114 4 Archaea YLA114 10 Archaea YLA114 13 Bacteria YLA114 6 Archaea YLA114 12 Archaea YLA114 5 Archaea YLA114 8 Archaea Euryarchaeota Thermoplasmata E2 15 Archaea YLA114 50 Archaea YLA114 8 Archaea YLA114 5 Archaea YLA114 21 Archaea YLA114 9 Archaea YLA114 6 Archaea YLA114 10 Archaea YLA114 13 Archaea YLA114 15 Archaea YLA114 7 Archaea Euryarchaeota Methanobacteria Methanobacteriales 26 Archaea YLA114 10 Archaea YLA114 19 Archaea Euryarchaeota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum 4 Archaea Euryarchaeota DSEG ArcA07 11 Bacteria Euryarchaeota Methanobacteria Methanobacteriales pMC1 pMC1A4 7 Archaea YLA114 21 Archaea YLA114 36 Archaea YLA114 8 Archaea YLA114 4 Archaea YLA114 18 Archaea YLA114 29 Archaea YLA114 14 Archaea YLA114 16 Archaea YLA114 10 Archaea YLA114 3 Archaea Euryarchaeota DSEG 16 Archaea Euryarchaeota Methanomicrobia Cenarchaeales Cenarchaeaceae 5 Archaea YLA114 6 Archaea YLA114 19 Archaea YLA114 9 Bacteria Proteobacteria Methanobacteria Methanobacteriales 3 Archaea Euryarchaeota Methanobacteria Methanobacteriales 9 Archaea YLA114 22 Archaea pMC2A384 7 Archaea YLA114 17 Archaea Euryarchaeota Archaeoglobi Archaeoglobales Archaeoglobaceae Archaeoglobus 21 Archaea YLA114 8 Archaea YLA114 4 Archaea YLA114 11 Archaea YLA114 20 Archaea YLA114 6 Archaea YLA114 27 Archaea YLA114 38 Archaea YLA114 28 Archaea YLA114 14 Archaea Euryarchaeota MCG 6 Archaea YLA114 4 Archaea YLA114 5 Archaea YLA114 32 Archaea YLA114 18 Archaea YLA114 4 Archaea YLA114 71 Archaea YLA114 10 Archaea YLA114 23 Archaea Euryarchaeota Methanobacteria Methanobacteriales Thermococcaceae 9 Archaea YLA114 7 Archaea YLA114 14 Archaea YLA114 9 Archaea YLA114 16 Archaea Euryarchaeota YLA114 6 Archaea YLA114 33 Archaea pMC2A384 3 Archaea Euryarchaeota YLA114 11 Archaea YLA114 11 Archaea YLA114 45 Archaea YLA114 47 Archaea YLA114 10 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter 14 Archaea YLA114 26 Archaea YLA114 9 Archaea YLA114 16 Archaea YLA114 6 Archaea YLA114 326 Archaea Crenarchaeota AAG 11 Archaea YLA114 16 Archaea YLA114 29 Archaea YLA114 8 Archaea YLA114 23 Archaea Crenarchaeota AAG 6 Archaea YLA114 27 Archaea YLA114 12 Archaea YLA114 26 Bacteria Planctomycetes Planctomycetia Pirellulales Pirellulaceae 28 Archaea Euryarchaeota Methanobacteria Methanobacteriales pMC1 pMC1A4 5 Archaea YLA114 14 Archaea YLA114 10 Archaea YLA114 8 Bacteria Euryarchaeota Thermoplasmata Archaeoglobales Archaeoglobaceae Archaeoglobus 19 Archaea YLA114 38 Archaea YLA114 4 Archaea YLA114 17 Bacteria Euryarchaeota Thermoplasmata E2 12 Archaea YLA114 58 Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanococcoides 15 Archaea YLA114 12 Archaea YLA114 9 Archaea YLA114 5 Archaea YLA114 27 Archaea YLA114 11 Archaea Euryarchaeota Thermoplasmata Methanobacteriales Cenarchaeaceae Methanobrevibacter 23 Archaea YLA114 16 Archaea Crenarchaeota MCG E2 DHVEG 20 Archaea YLA114 78 Archaea YLA114 10 Bacteria Euryarchaeota pMC2A384 131 Bacteria Euryarchaeota Synechococcophycideae Methanobacteriales 10 Archaea Euryarchaeota DSEG ArcA07 30 Archaea Euryarchaeota YLA114 14 Archaea Crenarchaeota 4 Archaea YLA114 8 Archaea YLA114 30 Archaea Euryarchaeota Thermoplasmata YLA114 11 Archaea YLA114 46 Archaea YLA114 7 Archaea Euryarchaeota YLA114 10 Archaea YLA114 3 Archaea YLA114 18 Archaea YLA114 11 Archaea YLA114 14 Archaea Euryarchaeota Actinobacteria Actinomycetales Halobacteriaceae 4 Archaea YLA114 15 Bacteria Euryarchaeota YLA114 3 Archaea YLA114 18 Archaea YLA114 14 Archaea Euryarchaeota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium 5 Archaea YLA114 23 Archaea Crenarchaeota AAG 10 Archaea YLA114 9 Archaea YLA114 11 Archaea Euryarchaeota Thermoplasmata Methanobacteriales Thermococcaceae pMC1A4 18 Archaea YLA114 19 Archaea YLA114 10 Archaea YLA114 7 Archaea YLA114 8 Archaea YLA114 6 Archaea YLA114 9 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 6 Archaea YLA114 14 Archaea YLA114 10 Archaea Crenarchaeota MBGB 17 Archaea Euryarchaeota DSEG ArcA07 11 Archaea YLA114 14 Archaea YLA114 4 Archaea YLA114 38 Bacteria Euryarchaeota Anaerolineae ArcA07 12 Archaea YLA114 19 Bacteria Euryarchaeota Methanobacteriales 4 Archaea YLA114 35 Archaea YLA114 7 Archaea YLA114 3 Archaea YLA114 22 Archaea YLA114 6 Archaea YLA114 2645 Archaea Crenarchaeota MCG B10 56 Archaea Crenarchaeota MBGB 14 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 5259 Archaea Crenarchaeota MBGB 5203 Archaea Crenarchaeota MCG pGrfC26 303 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 593 Archaea Crenarchaeota MCG pGrfC26 220 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 631 Archaea Crenarchaeota MCG B10 16 Archaea Crenarchaeota MCG 78 Archaea Crenarchaeota MCG 5 Archaea Crenarchaeota MCG 350 Archaea Crenarchaeota MCG pGrfC26 207 Archaea Crenarchaeota MCG pGrfC26 2214 Archaea Crenarchaeota MBGB 96 Archaea Crenarchaeota MCG 1005 Archaea Crenarchaeota MCG B10 24 Archaea Crenarchaeota MCG 14 Archaea Crenarchaeota MCG 484 Archaea Crenarchaeota MCG pGrfC26 13 Archaea Euryarchaeota DSEG ArcA07 98 Archaea Crenarchaeota MCG 1812 Archaea Crenarchaeota MCG pGrfC26 94 Archaea Crenarchaeota MCG 196 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 110 Archaea Euryarchaeota Thermoplasmata E2 CCA47 12 Bacteria Euryarchaeota YLA114 8 Archaea Euryarchaeota DSEG ArcA07 8 Bacteria YLA114 21 Archaea Crenarchaeota MCG 6 Bacteria Euryarchaeota YLA114 69 Bacteria YLA114 62 Archaea Crenarchaeota MCG 23 Archaea Euryarchaeota Thermoplasmata E2 CCA47 474 Archaea Crenarchaeota MBGB 249 Archaea Crenarchaeota MCG 16 Archaea Euryarchaeota DSEG 104A5 296 Archaea Crenarchaeota MCG B10 21 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera 10 Archaea YLA114 22 Archaea Crenarchaeota MCG 12 Archaea Euryarchaeota Thermoplasmata E2 9 Archaea Euryarchaeota DSEG ArcA07 12 Archaea Crenarchaeota MBGA 33 Archaea Crenarchaeota MBGB 18 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 6 Archaea YLA114 9 Archaea Euryarchaeota DSEG ArcA07 30 Archaea Euryarchaeota Thermoplasmata E2 CCA47 21 Archaea Euryarchaeota DSEG 104A5 18 Archaea Euryarchaeota Thermoplasmata E2 17 Archaea Crenarchaeota MCG 87 Archaea Crenarchaeota MBGB 6 Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosaetaceae Methanosaeta 99 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 5 Archaea Euryarchaeota Thermoplasmata E2 20c 48 Archaea Crenarchaeota MBGB 8 Archaea Euryarchaeota DSEG ArcA07 78 Archaea Euryarchaeota Thermoplasmata E2 16 Archaea Crenarchaeota MCG 7 Archaea Crenarchaeota MCG 5 Archaea Crenarchaeota MHVG 15 Archaea Crenarchaeota MCG B10 20 Archaea Euryarchaeota Thermoplasmata E2 68 Archaea Euryarchaeota Thermoplasmata E2 20c 5 Archaea Crenarchaeota MBGA 12 Archaea Crenarchaeota MCG 15 Archaea YLA114 1282 Archaea Crenarchaeota MCG B10 6 Archaea Euryarchaeota YLA114 65 Archaea Crenarchaeota MCG pGrfC26 15 Archaea Crenarchaeota MCG 9 Archaea Euryarchaeota Thermoplasmata E2 20c 23 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 19 Archaea Crenarchaeota MBGB 66 Archaea Crenarchaeota MCG 79 Archaea Crenarchaeota MCG pGrfC26 17 Archaea Crenarchaeota MCG 15 Archaea Crenarchaeota MCG 19 Archaea Crenarchaeota MCG 311 Archaea Crenarchaeota MCG B10 7 Archaea Crenarchaeota MCG 10 Archaea Euryarchaeota Thermoplasmata E2 9 Bacteria Euryarchaeota YLA114 7 Archaea Crenarchaeota MBGB 19 Archaea Crenarchaeota MCG 60 Archaea Crenarchaeota MCG 47 Archaea Crenarchaeota MCG 8 Archaea Crenarchaeota MCG 16 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 30 Archaea Crenarchaeota MHVG 15 Archaea Crenarchaeota MCG B10 16 Archaea Crenarchaeota MCG pGrfC26 16 Archaea Crenarchaeota MCG 25 Archaea Euryarchaeota YLA114 154 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 33 Archaea Crenarchaeota MBGB 16 Archaea Crenarchaeota THSCG 18 Archaea Euryarchaeota DSEG ArcA07 5 Archaea Euryarchaeota YLA114 25 Archaea Crenarchaeota MBGA 46 Archaea Euryarchaeota Thermoplasmata E2 CCA47 29 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 13 Archaea Euryarchaeota Thermoplasmata E2 6 Archaea Crenarchaeota MCG 31 Archaea Euryarchaeota DSEG 104A5 24 Archaea Crenarchaeota MCG 8 Archaea Crenarchaeota MCG 8 Archaea Crenarchaeota MCG 19 Archaea Euryarchaeota Thermoplasmata E2 10 Archaea YLA114 6 Archaea Euryarchaeota Methanobacteria Methanobacteriales 47 Archaea Crenarchaeota MHVG 21 Archaea YLA114 11 Archaea YLA114 12 Archaea Euryarchaeota DSEG 104A5 25 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 10 Archaea Crenarchaeota MCG 49 Archaea Crenarchaeota MCG pGrfC26 8 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 13 Bacteria YLA114 23 Archaea Crenarchaeota MBGB 46 Archaea Crenarchaeota THSCG 8 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 14 Archaea Euryarchaeota Thermoplasmata E2 14 Archaea YLA114 8 Archaea Crenarchaeota MCG pGrfC26 10 Archaea Crenarchaeota MCG 14 Bacteria Firmicutes Clostridia Clostridiales 17 Archaea Crenarchaeota MCG pGrfC26 22 Archaea Crenarchaeota MCG 5 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Parabacteroides 9 Bacteria Crenarchaeota Thermoprotei Thermoproteales Thermoproteaceae Thermocladium 46 Archaea Euryarchaeota DSEG DHVE3 8 Bacteria Bacteroidetes Gammaproteobacteria Bacteroidales Cytophagaceae Spirosoma 5 Bacteria Planctomycetes Planctomycetia Planctomycetales Planctomycetaceae Planctomyces 6 Bacteria Chloroflexi Anaerolineae OPB11 6 Archaea Crenarchaeota MCG 6 Archaea Crenarchaeota MCG 14 Archaea Crenarchaeota MCG 40 Archaea Euryarchaeota Methanobacteria Methanobacteriales WSA2