3 Archaea YLA114 5 Archaea Euryarchaeota Methanobacteria Methanobacteriales 4 Bacteria Crenarchaeota MCG pGrfC26 4 Archaea Euryarchaeota Clostridia 11 Archaea Euryarchaeota Thermoplasmata E2 22 Archaea Euryarchaeota Thermoplasmata E2 55 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae 4 Archaea Euryarchaeota Methanomicrobia Methanocellales Methanocellaceae Methanocella 97 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 7 Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanococcoides 240 Archaea Crenarchaeota MBGB 12 Archaea Euryarchaeota pMC2A384 3212 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 35 Archaea Crenarchaeota MBGB 22 Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina 17 Archaea Euryarchaeota Thermoplasmata E2 258 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 3315 Archaea Crenarchaeota MCG 636 Archaea Crenarchaeota MCG 243 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 516 Bacteria Proteobacteria Bacteroidia Bacteroidales 29 Archaea Euryarchaeota Thermoplasmata E2 1586 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 1485 Archaea Crenarchaeota MCG pGrfC26 583 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 151 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 172 Archaea Euryarchaeota Thermoplasmata E2 CCA47 7 Archaea Crenarchaeota MBGB 247 Archaea Crenarchaeota MCG 90 Archaea Crenarchaeota MCG 6 Archaea Crenarchaeota MCG 9 Bacteria Proteobacteria Bacteroidia Bacteroidales 196 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 178 Archaea Crenarchaeota MCG 103 Archaea Crenarchaeota MCG 343 Archaea Crenarchaeota 141 Bacteria Proteobacteria Anaerolineae Bacteroidales Moraxellaceae 37 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 226 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 1073 Archaea Crenarchaeota MCG 956 Archaea Crenarchaeota MCG B10 215 Archaea Crenarchaeota MBGB 117 Archaea Crenarchaeota MCG pGrfC26 176 Archaea Euryarchaeota Thermoplasmata E2 69 Bacteria Proteobacteria Alphaproteobacteria Actinomycetales Propionibacteriaceae Enhydrobacter 842 Archaea Crenarchaeota MCG 80 Bacteria Proteobacteria Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 142 Archaea Crenarchaeota MCG 65 Bacteria Proteobacteria Bacteroidia Bacteroidales Gemmataceae 163 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Gemmataceae 9 Archaea Euryarchaeota YLA114 135 Archaea Crenarchaeota MCG 272 Archaea Crenarchaeota MBGB 122 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 194 Archaea Crenarchaeota 289 Archaea Crenarchaeota MCG 38 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 59 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Xanthomonadaceae 12 Bacteria Proteobacteria Bacteroidia Bacteroidales Pirellulaceae 51 Bacteria Proteobacteria Gammaproteobacteria Actinomycetales Propionibacteriaceae 49 Archaea Crenarchaeota MCG 69 Archaea Crenarchaeota 279 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 34 Archaea Crenarchaeota 28 Bacteria Proteobacteria Clostridia Clostridiales 36 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 3 Archaea Crenarchaeota MBGB 93 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 17 Archaea Euryarchaeota Thermoplasmata E2 52 Archaea Euryarchaeota Thermoplasmata E2 20c 63 Bacteria Proteobacteria Deltaproteobacteria Bacteroidales 194 Archaea Crenarchaeota MBGB 19 Bacteria Proteobacteria Actinobacteria Actinomycetales mitochondria 13 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 68 Archaea Crenarchaeota MBGB 62 Archaea Euryarchaeota Thermoplasmata E2 20c 10 Archaea Crenarchaeota MCG 174 Bacteria Proteobacteria Bacteroidia Bacteroidales 23 Archaea Crenarchaeota MBGB 11 Bacteria Proteobacteria Gammaproteobacteria Actinomycetales Propionibacteriaceae Propionibacterium Propionibacterium_acnes 66 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 142 Archaea Crenarchaeota MCG pGrfC26 29 Bacteria Bacteroidetes Gammaproteobacteria Bacteroidales 51 Archaea Crenarchaeota MCG 111 Archaea Crenarchaeota MCG 15 Archaea Crenarchaeota MCG 8 Archaea Euryarchaeota Thermoplasmata E2 27 Archaea Crenarchaeota MCG 19 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera 66 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 13 Archaea Crenarchaeota MCG 39 Bacteria Bacteroidetes Bacteroidia Bacteroidales 36 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 159 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 10 Bacteria Firmicutes Bacteroidia Bacteroidales Prevotellaceae Prevotella 54 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 5 Archaea Crenarchaeota MCG 17 Archaea Crenarchaeota MBGA 22 Archaea Euryarchaeota Thermoplasmata E2 28 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 706 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 61 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 48 Bacteria Proteobacteria Gammaproteobacteria Bacillales Pirellulaceae 27 Bacteria Bacteroidetes Bacteroidia Bacteroidales 20 Bacteria Proteobacteria Deltaproteobacteria Bacteroidales 14 Bacteria Bacteroidetes Bacteroidia Bacteroidales 22 Bacteria Proteobacteria Deltaproteobacteria Clostridiales 13 Archaea Crenarchaeota MCG pGrfC26 28 Archaea Crenarchaeota MCG 18 Archaea Crenarchaeota MCG 14 Archaea Crenarchaeota MHVG 22 Archaea Crenarchaeota MCG 10 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 17 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 12 Bacteria Proteobacteria Clostridia Clostridiales 152 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 11 Archaea Crenarchaeota MCG pGrfC26 8 Bacteria Proteobacteria Deltaproteobacteria Clostridiales 53 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 5 Archaea Euryarchaeota Thermoplasmata E2 28 Archaea Euryarchaeota DSEG ArcA07 17 Archaea Euryarchaeota DSEG ArcA07 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae