10 Bacteria Proteobacteria Bacteroidia Bacteroidales Gemmataceae Prevotella 17 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales 5 Bacteria Proteobacteria Bacilli Bacillales Bacillaceae 140 Bacteria Planctomycetes Planctomycetia Pirellulales Pirellulaceae 20 Archaea Crenarchaeota 8 Archaea Crenarchaeota 607 Archaea Crenarchaeota MBGB 18 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter_thermautotrophicus 12 Bacteria Planctomycetes Planctomycetia Bacteroidales Pirellulaceae 209 Bacteria Proteobacteria Bacilli Bacteroidales Helicobacteraceae 56 Bacteria Proteobacteria Clostridia Clostridiales Bacillaceae Bacillus 4 Bacteria Firmicutes Clostridia Clostridiales Verrucomicrobiaceae 12 Archaea YLA114 3 Archaea Euryarchaeota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum 3 Bacteria Proteobacteria Clostridia Bacteroidales Coriobacteriaceae 3 Archaea 3 Archaea pMC2A384 5 Bacteria Planctomycetes Clostridia Clostridiales Lachnospiraceae 3 Archaea YLA114 193 Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus 32 Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina 4 Archaea YLA114 10 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 7 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter 8 Archaea Euryarchaeota Methanobacteria Methanobacteriales 12 Archaea Euryarchaeota Thermoplasmata E2 1391 Bacteria Proteobacteria Betaproteobacteria Clostridiales Deinococcaceae Deinococcus 14 Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanococcoides 77 Bacteria Bacteroidetes Bacteroidia Bacteroidales Gemmataceae 13 Archaea Euryarchaeota Methanobacteria Methanobacteriales WSA2 2688 Archaea Crenarchaeota MCG 237 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 209 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 992 Bacteria Proteobacteria Bacteroidia Bacteroidales 1 182 Bacteria Proteobacteria Actinobacteria Actinomycetales 93 Archaea Crenarchaeota MCG 120 Archaea Crenarchaeota 63 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Desulfobulbaceae 219 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 140 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 36 Archaea Euryarchaeota Thermoplasmata E2 20c 631 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Lachnospiraceae 72 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 367 Bacteria Proteobacteria Deltaproteobacteria Actinomycetales Bacillaceae 43 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales mitochondria 237 Bacteria Actinobacteria Actinobacteria Actinomycetales Prevotellaceae Prevotella Prevotella_copri 45 Bacteria Proteobacteria Deltaproteobacteria Clostridiales Pirellulaceae 217 Archaea Euryarchaeota Thermoplasmata E2 CCA47 175 Archaea Euryarchaeota Thermoplasmata E2 118 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae 615 Archaea Crenarchaeota MCG 698 Archaea Crenarchaeota MCG B10 50 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 172 Bacteria Proteobacteria Bacteroidia Bacteroidales Pseudomonadaceae Pseudomonas 188 Archaea Crenarchaeota MBGB 5 Archaea Euryarchaeota Thermoplasmata E2 573 Archaea Crenarchaeota MCG pGrfC26 243 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae 9 Archaea Crenarchaeota MCG pGrfC26 116 Archaea Crenarchaeota MCG 312 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 1792 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 25 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 21 Bacteria Proteobacteria Actinobacteria Actinomycetales Propionibacteriaceae Propionibacterium Propionibacterium_acnes 218 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 21 Bacteria Proteobacteria Bacteroidia Bacteroidales S24 78 Bacteria Proteobacteria Clostridia Clostridiales 68 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 34 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 25 Bacteria Proteobacteria Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 287 Archaea Crenarchaeota MCG 250 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae 223 Archaea Crenarchaeota MCG 119 Bacteria Proteobacteria Actinobacteria Actinomycetales 185 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 270 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Rhodospirillaceae 57 Archaea Crenarchaeota MCG 15 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae Blautia 168 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 104 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 218 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 8 Archaea Crenarchaeota MBGB 40 Archaea Crenarchaeota MCG pGrfC26 185 Archaea Crenarchaeota MCG 155 Bacteria Chloroflexi Anaerolineae Bacteroidales Pirellulaceae 115 Archaea Crenarchaeota MCG 54 Bacteria Proteobacteria Bacteroidia Bacteroidales 86 Bacteria Proteobacteria Clostridia Clostridiales Lachnospiraceae 48 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 66 Archaea Crenarchaeota 43 Bacteria Bacteroidetes Bacteroidia Bacteroidales 112 Bacteria Proteobacteria Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium 259 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales 181 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 264 Archaea Crenarchaeota MCG 6 Bacteria Proteobacteria Actinobacteria Actinomycetales Micromonosporaceae Staphylococcus 30 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 21 Archaea Crenarchaeota MBGA 66 Archaea Euryarchaeota Thermoplasmata E2 35 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 16 Bacteria Firmicutes Clostridia Clostridiales 9 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 3 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae 24 Archaea Crenarchaeota MCG 49 Bacteria Bacteroidetes Planctomycetia Bacteroidales Gemmataceae 308 Archaea Crenarchaeota MCG 3 Bacteria Proteobacteria Bacteroidia Bacteroidales 109 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales mitochondria 280 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 47 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 22 Bacteria Proteobacteria Bacteroidia Bacteroidales Pirellulaceae Prevotella 7 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Pseudomonadaceae Pseudomonas 8 Archaea Crenarchaeota MHVG 325 Archaea Crenarchaeota MCG 59 Bacteria Proteobacteria Alphaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 30 Bacteria Proteobacteria Deltaproteobacteria Bacteroidales Sulfolobaceae 31 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 6 Bacteria Proteobacteria Actinobacteria Actinomycetales Prevotellaceae Prevotella Prevotella_copri 55 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Halobacteriaceae 67 Archaea Crenarchaeota MBGB 599 Bacteria Proteobacteria Deltaproteobacteria Gemmatales Pirellulaceae 21 Bacteria Proteobacteria Bacteroidia Bacteroidales 13 Bacteria Proteobacteria Actinobacteria Actinomycetales Halomonadaceae Candidatus_Portiera 106 Bacteria Proteobacteria Bacilli Bacillales mitochondria 95 Bacteria Proteobacteria Bacteroidia Bacteroidales Corynebacteriaceae Corynebacterium 105 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 39 Archaea Crenarchaeota MCG 140 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 63 Archaea Crenarchaeota MCG 30 Bacteria Proteobacteria Planctomycetia Bacteroidales Gemmataceae Gemmata 14 Bacteria Proteobacteria Actinobacteria Actinomycetales Streptomyces 8 Bacteria Bacteroidetes Anaerolineae Bacteroidales SHA 12 Bacteria Proteobacteria Clostridia Clostridiales Prevotellaceae Prevotella 57 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Syntrophobacteraceae 2598 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 45 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Pasteurellaceae Candidatus_Portiera 38 Archaea Crenarchaeota MCG 48 Bacteria Proteobacteria Actinobacteria Actinomycetales Helicobacteraceae Corynebacterium 89 Bacteria Proteobacteria Gammaproteobacteria Actinomycetales 23 Bacteria Proteobacteria Bacilli Clostridiales Roseiflexus 146 Archaea Crenarchaeota MBGB 29 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Lachnospiraceae Planctomyces 26 Archaea Crenarchaeota MBGB 42 Bacteria Bacteroidetes Bacteroidia Bacteroidales 158 Bacteria Proteobacteria Bacilli Bacillales 133 Archaea Crenarchaeota 94 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 157 Archaea Crenarchaeota MBGB 13 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera 18 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 25 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 3 Archaea Euryarchaeota Thermoplasmata E2 6 Archaea Crenarchaeota MCG 5 Archaea Euryarchaeota DSEG DHVE3 19 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 428 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 102 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 22 Archaea Crenarchaeota MCG 12 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Porphyromonadaceae Bacteroides 9 Archaea Crenarchaeota MBGB 29 Bacteria Proteobacteria Planctomycetia Actinomycetales Erysipelotrichaceae 120 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 34 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae 87 Archaea Crenarchaeota MCG B10 6 Bacteria Proteobacteria Gammaproteobacteria Actinomycetales Enterobacteriaceae 86 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 149 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 13 Archaea Euryarchaeota Thermoplasmata E2 18 Archaea Crenarchaeota MCG pGrfC26 166 Bacteria Proteobacteria Alphaproteobacteria Actinomycetales Gemmataceae 38 Archaea Crenarchaeota MCG 97 Archaea Crenarchaeota MCG 124 Archaea Crenarchaeota MBGB 7 Bacteria Actinobacteria Actinobacteria Actinomycetales Micrococcaceae Kocuria 20 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 35 Archaea Euryarchaeota Thermoplasmata E2 20c 9 Archaea Euryarchaeota Thermoplasmata E2 Marine_group_II 47 Bacteria Proteobacteria Anaerolineae Bacteroidales Gemmataceae 6 Archaea Crenarchaeota MCG 40 Archaea Crenarchaeota 30 Bacteria Proteobacteria Bacteroidia Bacteroidales 95 Archaea Crenarchaeota MCG 12 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae 17 Archaea Crenarchaeota MCG 16 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Planctomycetaceae Planctomyces 22 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 11 Archaea Euryarchaeota Thermoplasmata E2 TMEG 8 Archaea Crenarchaeota MBGB 31 Bacteria Chloroflexi Bacteroidia Bacteroidales Prevotellaceae Prevotella 29 Bacteria Crenarchaeota Clostridia Clostridiales Gemmataceae 10 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales 7 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Lachnospiraceae 6 Archaea Crenarchaeota MBGB 9 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 61 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 13 Archaea Crenarchaeota MHVG 10 Archaea Crenarchaeota 167 Bacteria Proteobacteria Betaproteobacteria Campylobacterales Helicobacteraceae 69 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Pirellulaceae 40 Archaea Euryarchaeota Thermoplasmata E2 CCA47 6 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 7 Archaea Euryarchaeota YLA114 31 Archaea Crenarchaeota MBGB 4 Archaea Euryarchaeota Thermoplasmata E2 20c 177 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae 35 Archaea Crenarchaeota MCG 6 Bacteria Bacteroidetes Bacteroidia Bacteroidales 11 Archaea Crenarchaeota MBGA NRP 31 Archaea Crenarchaeota MCG pGrfC26 16 Archaea Euryarchaeota DSEG ArcA07 3 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Enterobacteriaceae 7 Archaea Euryarchaeota DSEG ArcA07 9 Archaea Euryarchaeota DSEG ArcA07 3 Archaea Euryarchaeota DSEG ArcA07