11 Bacteria Chlorobi SJA 3 Bacteria Proteobacteria Bacteroidia Bacteroidales Cenarchaeaceae 750 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Helicobacteraceae Lactobacillus 1603 Bacteria Proteobacteria Gammaproteobacteria Actinomycetales Enterococcaceae Enterococcus 4 Bacteria Actinobacteria Actinobacteria Actinomycetales Xanthomonadaceae 14 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Porphyromonadaceae 15 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 16 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 3 Bacteria Planctomycetes Planctomycetia Bacteroidales Isosphaeraceae Isosphaera 39 Bacteria Proteobacteria Bacilli Bacteroidales Chitinophagaceae 40 Bacteria Proteobacteria Clostridia Clostridiales mitochondria 3 Bacteria Chloroflexi Clostridia Clostridiales Chloroflexaceae Chloroflexus 13 Bacteria Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 83 Bacteria Bacteroidetes Flavobacteriia Clostridiales 16 Bacteria Bacteroidetes Clostridia Clostridiales Flavobacteriaceae 930 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 5 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales Flavobacteriaceae 13 Bacteria Bacteroidetes Clostridia Clostridiales 32 Bacteria Proteobacteria Phycisphaerae MSBL9 34 Bacteria Bacteroidetes Clostridia Clostridiales Lachnospiraceae 39 Bacteria Bacteroidetes Bacteroidia Bacteroidales Clostridiaceae Clostridium 7 Bacteria Bacteroidetes Alphaproteobacteria Rickettsiales mitochondria 1857 Bacteria Cyanobacteria Chloroplast Streptophyta 8 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 3 Bacteria Actinobacteria Actinobacteria Actinomycetales Gaiellaceae 3 Bacteria Proteobacteria Bacilli Bacillales Helicobacteraceae 3 Bacteria Actinobacteria Actinobacteria Actinomycetales Micrococcaceae 4 Bacteria Bacteroidetes Gammaproteobacteria Bacteroidales Porphyromonadaceae 4 Bacteria Euryarchaeota Phycisphaerae Halobacteriales Halobacteriaceae 3 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Anoxybacillus Anoxybacillus_kestanbolensis 3 Bacteria Proteobacteria Gammaproteobacteria Actinomycetales Spirochaetaceae 23 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae 33 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Kushneria 3 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 6 Bacteria Bacteroidetes Clostridia Clostridiales Lachnospiraceae 4 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales 4 Bacteria Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae Stenotrophomonas 40 Bacteria Proteobacteria Clostridia Clostridiales Lachnospiraceae 3 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 3 Bacteria Firmicutes Bacteroidia Bacteroidales Sulfobacillaceae Sulfobacillus 7 Bacteria Proteobacteria Alphaproteobacteria Campylobacterales Helicobacteraceae 105 Bacteria Bacteroidetes Bacteroidia Bacteroidales Chitinophagaceae 7 Bacteria Bacteroidetes Clostridia Clostridiales Lachnospiraceae 21 Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Methylobacteriaceae 96 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 14 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter Acinetobacter_johnsonii 84 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 24 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 70 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 3 Bacteria Proteobacteria Clostridia Clostridiales Acholeplasmataceae 21 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 16 Bacteria Proteobacteria Clostridia Clostridiales Helicobacteraceae 19 Bacteria Firmicutes Clostridia Clostridiales mitochondria 14 Bacteria Proteobacteria Gammaproteobacteria Campylobacterales mitochondria 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales Pirellulaceae 78 Bacteria Firmicutes Clostridia Clostridiales Staphylococcus 5 Bacteria Firmicutes Clostridia Clostridiales mitochondria 11 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 6 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 110 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 3 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales 7 Bacteria Bacteroidetes Bacteroidia Bacteroidales 13 Bacteria Proteobacteria Gammaproteobacteria Campylobacterales Helicobacteraceae 12 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 4 Bacteria Proteobacteria Gammaproteobacteria Flavobacteriales Flavobacteriaceae 5 Bacteria Proteobacteria Bacilli Bacillales Bacillaceae Haemophilus 40 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 8 Bacteria Bacteroidetes Clostridia Clostridiales 50 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Helicobacteraceae Sulfurimonas 889 Bacteria Firmicutes Bacilli Actinomycetales Propionibacteriaceae Propionibacterium Propionibacterium_acnes 3 Bacteria Proteobacteria Clostridia Clostridiales mitochondria 4 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales S24 3 Bacteria Proteobacteria Deltaproteobacteria Bacteroidales 3 Bacteria Firmicutes Actinobacteria Actinomycetales 8 Bacteria Firmicutes Clostridia Clostridiales 3 Bacteria Proteobacteria Clostridia Clostridiales Pirellulaceae 14 Bacteria Bacteroidetes Actinobacteria Actinomycetales mitochondria 4 Bacteria Firmicutes Bacilli Bacteroidales Bacillaceae Bacillus 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales S24 10 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 531 Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus 3 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Flavobacteriaceae 4 Bacteria Firmicutes Clostridia Clostridiales 3 Bacteria Verrucomicrobia Actinobacteria Nitrospirales Comamonadaceae 3 Bacteria Crenarchaeota Bacteroidia Bacteroidales 11 Bacteria Proteobacteria Alphaproteobacteria Campylobacterales Helicobacteraceae Sulfuricurvum Sulfuricurvum_kujiense 388 Bacteria Cyanobacteria Chloroplast Streptophyta 3 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae Sulfobacillus 3 Bacteria Euryarchaeota Planctomycetia Thermococcales Thermococcaceae 849 Bacteria Cyanobacteria Chloroplast Streptophyta 3 Bacteria Bacteroidetes Clostridia Clostridiales 3 Bacteria Firmicutes Bacteroidia Bacteroidales Prevotellaceae Prevotella 661 Bacteria Cyanobacteria Chloroplast Streptophyta 3 Bacteria Firmicutes Bacteroidia Bacteroidales Prevotellaceae Prevotella 5 Bacteria Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae Stenotrophomonas 4 Bacteria Bacteroidetes Clostridia Clostridiales Flavobacteriaceae 197 Bacteria Proteobacteria Actinobacteria Actinomycetales Propionibacteriaceae Propionibacterium Propionibacterium_acnes 4 Bacteria Bacteroidetes Bacteroidia Bacteroidales S24 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 3 Bacteria Bacteroidetes Betaproteobacteria Flavobacteriales mitochondria 11 Bacteria Proteobacteria Opitutae Actinomycetales Verrucomicrobiaceae Pelagicoccus 20 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus 234 Bacteria Proteobacteria Alphaproteobacteria Campylobacterales Helicobacteraceae Sulfuricurvum Sulfuricurvum_kujiense 3 Bacteria Proteobacteria Gammaproteobacteria Actinomycetales Gaiellaceae 4 Bacteria Proteobacteria Deltaproteobacteria Bacteroidales Bdellovibrionaceae 3 Bacteria Proteobacteria Actinobacteria Actinomycetales Acetobacteraceae 3 Bacteria Acidobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 6 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Mesonia 3 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus 3 Bacteria Planctomycetes Planctomycetia Gemmatales Isosphaeraceae 3 Bacteria Actinobacteria Actinobacteria Actinomycetales Thermaceae 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales 9 Bacteria Proteobacteria Clostridia Clostridiales Nitrospiraceae 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales S24 3 Bacteria Firmicutes Clostridia Clostridiales Prevotellaceae Prevotella 6 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas_fragi 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales S24 253 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 3 Bacteria Proteobacteria Deltaproteobacteria Myxococcales Haliangiaceae 3 Bacteria Firmicutes Clostridia Clostridiales Cytophagaceae 4 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus 103 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 5 Bacteria Firmicutes Clostridia Clostridiales mitochondria 5 Bacteria Firmicutes Clostridia Clostridiales Spirochaetaceae Treponema 3 Bacteria Aquificae Aquificae Aquificales Aquificaceae Aquifex 48 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Spirochaetaceae Treponema 3 Bacteria Proteobacteria Gammaproteobacteria Clostridiales SHA 3 Bacteria Proteobacteria ABS 8 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae Fusobacterium 3 Bacteria Proteobacteria Actinobacteria Actinomycetales Halobacteriaceae Halobaculum 5 Bacteria Firmicutes Bacilli Bacillales 15 Archaea Crenarchaeota MCG B10 22 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Klebsiella 73 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 7 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Aminobacter 7 Bacteria Actinobacteria Actinobacteria Actinomycetales Mycobacteriaceae Mycobacterium 183 Archaea Crenarchaeota pUWA2 33 Bacteria Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Halonotius 3 Bacteria Actinobacteria Actinobacteria Actinomycetales Propionibacteriaceae Propionibacterium Propionibacterium_acnes 4 Archaea Crenarchaeota MCG pGrfC26 8 Archaea Crenarchaeota pUWA2 51 Archaea Crenarchaeota pUWA2 14 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Bacteroidaceae Bacteroides Roseomonas_mucosa 34 Bacteria Proteobacteria Gammaproteobacteria 22 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Geobacillus 35 Bacteria Cyanobacteria Nostocophycideae Nostocales Nostocaceae