5 Bacteria OD1 ZB2 11 Bacteria Bacteroidetes Rhodothermaceae 7 Bacteria Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae 279 Bacteria Proteobacteria Gammaproteobacteria Salinisphaerales Salinisphaeraceae Salinisphaera 6 Bacteria Actinobacteria Actinobacteria Actinomycetales Nocardioidaceae 9 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae 14 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Erwinia 52 Bacteria Actinobacteria Actinobacteria Actinomycetales Microbacteriaceae Curtobacterium 29 Bacteria Proteobacteria Clostridia Clostridiales Lachnospiraceae 249 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 10 Bacteria Actinobacteria Actinobacteria Actinomycetales Nocardioidaceae 828 Bacteria Cyanobacteria Chloroplast Streptophyta 3 Bacteria Cyanobacteria Synechococcophycideae Synechococcales Synechococcaceae Synechococcus 20 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 6 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae Gluconobacter 43 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 22 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Enterobacteriaceae 7 Bacteria Proteobacteria Clostridia Clostridiales 19 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae 21 Bacteria Firmicutes Clostridia Clostridiales 26 Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Aurantimonadaceae Fulvimarina 9 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales mitochondria 7 Archaea YLA114 14 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 11 Bacteria Firmicutes Bacteroidia Bacteroidales 6 Bacteria Firmicutes Clostridia Clostridiales Spirochaetaceae 28 Archaea YLA114 8 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae 5 Bacteria OD1 ABY1 6 Bacteria OD1 ABY1 6 Bacteria OD1 ABY1 28 Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Methylobacteriaceae Methylobacterium Methylobacterium_komagatae 12 Archaea Euryarchaeota Methanomicrobia F99a103 7 Bacteria Verrucomicrobia S 7 Archaea YLA114 9 Archaea YLA114 4 Archaea YLA114 302 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 3 Archaea YLA114 382 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 6 Bacteria OP11 WCHB1 26 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 125 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 52 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 20 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 109 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 13 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 16 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 44 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 169 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 72 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 186 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 16 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 50 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 11 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 37 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 15 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 73 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 33 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 31 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 132 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 28 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 65 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 127 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 172 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 22 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 248 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 4 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 9 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 104 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 52 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 101 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 25 Archaea Euryarchaeota YLA114 7 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 23 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 10 Archaea Euryarchaeota DSEG Methanobacteriales 49 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 172 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 16 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 8 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 15 Archaea Euryarchaeota DSEG 104A5 8 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 51 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 20 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 15 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 33 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 3 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 11 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 9 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 7 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 11 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 9 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 33 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 11 Archaea YLA114 11 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 15 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 4 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae 6 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 3 Archaea Euryarchaeota Methanobacteria Methanobacteriales 4 Archaea YLA114 7 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 4 Archaea Euryarchaeota Methanobacteriales 6 Archaea YLA114 40 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 6 Archaea YLA114 27 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 37 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 6 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 17 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 10 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 34 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 11 Archaea Euryarchaeota Methanobacteria Methanobacteriales pMC1 pMC1A4 7 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 3 Archaea YLA114 12 Bacteria Bacteroidetes Gammaproteobacteria Bacteroidales Enterobacteriaceae 13 Archaea YLA114 57 Archaea Crenarchaeota MCG pGrfC26 6 Archaea Euryarchaeota YLA114 20 Archaea Crenarchaeota MCG 40 Archaea Crenarchaeota MCG 7 Archaea Euryarchaeota DSEG ArcA07 21 Archaea Euryarchaeota DSEG ArcA07 9 Archaea Crenarchaeota MCG 22 Archaea YLA114 14 Archaea Euryarchaeota YLA114 12 Archaea Euryarchaeota Methanobacteria Methanobacteriales pMC1 pMC1A4 5 Bacteria OD1 ABY1 11 Bacteria OD1 ABY1 8 Bacteria OD1 ABY1 5 Bacteria OD1 ABY1 5 Bacteria OD1 ABY1 22 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 4 Bacteria OD1 ABY1 3 Bacteria OD1 ABY1 28 Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Xanthobacteraceae Labrys 4 Bacteria Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae 7 Bacteria Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae 14 Bacteria Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae 11 Bacteria Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae 10 Bacteria Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae 15 Bacteria Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae 3 Bacteria Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae Treponema 23 Bacteria Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae 10 Bacteria Spirochaetes Spirochaetes Spirochaetales Spirochaetaceae 16 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 10 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales 59 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Ornithobacterium 60 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Leeuwenhoekiella Leeuwenhoekiella_marinoflava 8 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Leeuwenhoekiella Leeuwenhoekiella_marinoflava 7 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium 5 Bacteria Proteobacteria Deltaproteobacteria Myxococcales 8 Bacteria Proteobacteria Deltaproteobacteria Myxococcales 5 Bacteria OP3 PBS 4 Bacteria OP3 PBS 64 Bacteria Tenericutes Mollicutes 36918 Bacteria Tenericutes Mollicutes 12 Bacteria Proteobacteria Gammaproteobacteria Chromatiales 5 Bacteria Proteobacteria Gammaproteobacteria 14 Bacteria Firmicutes Erysipelotrichi Erysipelotrichales Erysipelotrichaceae Bulleidia Bulleidia_p 47 Bacteria Tenericutes Mollicutes 11 Bacteria Proteobacteria Gammaproteobacteria Thiotrichales 14 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae 11 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales OM60 7 Bacteria Proteobacteria Gammaproteobacteria Thiotrichales 26 Bacteria Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae 3 Bacteria Proteobacteria Gammaproteobacteria 3 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Microbulbifer 15 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas 9 Bacteria Actinobacteria Thermoleophilia Gaiellales AK1AB1_02E 11 Bacteria Proteobacteria Deltaproteobacteria Myxococcales 16 Bacteria OP11 WCHB1 65 Bacteria Proteobacteria Gammaproteobacteria 17 Bacteria Proteobacteria Gammaproteobacteria 8 Bacteria Proteobacteria Deltaproteobacteria Bdellovibrionales Bdellovibrionaceae Bdellovibrio 12 Bacteria Bacteroidetes Saprospiraceae 15 Bacteria Bacteroidetes Saprospiraceae 352 Bacteria Bacteroidetes Saprospiraceae 7 Bacteria Bacteroidetes Saprospiraceae 10 Bacteria Bacteroidetes Saprospiraceae 4 Bacteria Bacteroidetes Saprospiraceae 5 Bacteria OP11 WCHB1 10 Bacteria Bacteroidetes Saprospiraceae 3 Bacteria Bacteroidetes Saprospiraceae 5 Bacteria Bacteroidetes Saprospiraceae 7 Bacteria Tenericutes Mollicutes Anaeroplasmatales Anaeroplasmataceae 4 Bacteria OD1 4 Bacteria OD1 ZB2 1908 Bacteria Actinobacteria Actinobacteria Actinomycetales Frankiaceae 3800 Bacteria Actinobacteria Actinobacteria Actinomycetales Frankiaceae 33 Bacteria Actinobacteria Actinobacteria Actinomycetales 10 Bacteria Proteobacteria TA18 PHOS 39 Bacteria TM7 TM7 13 Bacteria TM7 TM7 1410 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingobium 310 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae 6860 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Erythrobacteraceae 13 Bacteria Chloroflexi Dehalococcoidetes Dehalococcoidales Dehalococcoidaceae 12 Bacteria TM7 TM7 8 Bacteria TM7 TM7 674 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae 160 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas_wittichii 3 Bacteria Proteobacteria Alphaproteobacteria Kordiimonadales 3 Archaea YLA114 304 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Erythrobacteraceae 21 Bacteria Proteobacteria Alphaproteobacteria Kordiimonadales Kordiimonadaceae 87 Bacteria Proteobacteria Alphaproteobacteria 16 Bacteria Proteobacteria Alphaproteobacteria 144 Bacteria Proteobacteria Gammaproteobacteria Chromatiales 155 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Erythrobacteraceae Lutibacterium 58 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas_wittichii 6 Bacteria Proteobacteria Alphaproteobacteria 8 Bacteria Proteobacteria Gammaproteobacteria Chromatiales 175 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingobium 17 Bacteria Proteobacteria Gammaproteobacteria Thiotrichales Thiotrichaceae Thiothrix 3 Bacteria Cyanobacteria 4C0d YS2 1340 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae 5 Bacteria WS2 SHA 276 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Erythrobacteraceae 8 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae 1391 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas_wittichii 13 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 49 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae 3 Bacteria GN02 BD1 9 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Arcobacter 1741 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae 265 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingopyxis 284 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae 2881 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Erythrobacteraceae 66 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Erythrobacteraceae Erythrobacter 50 Bacteria Proteobacteria Alphaproteobacteria 7 Bacteria Spirochaetes Brachyspiraceae 5 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 5 Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Methylocystaceae 5 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae 24 Bacteria OP11 WCHB1 10 Bacteria Actinobacteria Actinobacteria Actinomycetales 9 Bacteria Proteobacteria Alphaproteobacteria Kordiimonadales Kordiimonadaceae 11 Bacteria ZB3 25 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae 21 Bacteria Proteobacteria Gammaproteobacteria Vibrionales Pseudoalteromonadaceae Pseudoalteromonas 3 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Glaciecola