7 Bacteria Firmicutes Bacilli Bacteroidales Spirochaetaceae 3 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 16 Bacteria Proteobacteria Clostridia Clostridiales 3 Bacteria Actinobacteria Actinobacteria Actinomycetales 7 Bacteria Proteobacteria Clostridia Clostridiales Lachnospiraceae 6 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 7 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 32 Bacteria Proteobacteria Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera 10 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 32 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 11 Bacteria Firmicutes Bacilli Bacillales Bacillaceae 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3 Bacteria Proteobacteria Chloroplast Clostridiales mitochondria 7 Bacteria Firmicutes Thermoplasmata Bacteroidales DHVEG 10 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces 5 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 3 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae 3 Bacteria Firmicutes Actinobacteria Actinomycetales Nocardioidaceae Mycoplasma 34 Bacteria Proteobacteria Clostridia Clostridiales WAL_1855D 7 Bacteria Proteobacteria Anaerolineae Actinomycetales Dehalococcoidaceae 5 Bacteria Bacteroidetes Bacteroidia Bacteroidales 16 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 28 Bacteria Actinobacteria Actinobacteria Actinomycetales C111 8 Bacteria Proteobacteria Clostridia Clostridiales 8 Bacteria Chloroflexi Bacteroidia Bacteroidales 4 Bacteria Proteobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces 47 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 6 Bacteria Firmicutes Bacilli Actinomycetales Gemmataceae 7 Bacteria Proteobacteria Clostridia Clostridiales Corynebacteriaceae Corynebacterium 9 Bacteria Proteobacteria Alphaproteobacteria Actinomycetales DHVEG 40 Bacteria Euryarchaeota Thermoplasmata Clostridiales Halobacteriaceae 11 Bacteria Proteobacteria Alphaproteobacteria Clostridiales DHVEG 27 Bacteria Firmicutes Clostridia Clostridiales Erysipelotrichaceae PSB 10 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 13 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 67 Bacteria Proteobacteria Thermoplasmata E2 17 Bacteria Proteobacteria Betaproteobacteria Clostridiales Rhodocyclaceae Leptolyngbya 27 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcus 79 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 8 Bacteria Euryarchaeota Thermoplasmata E2 8 Bacteria Firmicutes Clostridia Clostridiales MSBL1 SAGMEG 59 Bacteria Proteobacteria Deltaproteobacteria Rickettsiales Desulfobacteraceae 15 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 14 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 14 Bacteria Bacteroidetes Bacteroidia Bacteroidales 3 Bacteria Proteobacteria Betaproteobacteria Comamonadaceae 27 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 75 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 32 Bacteria Proteobacteria Alphaproteobacteria E2 9 Bacteria Proteobacteria Deltaproteobacteria Bacteroidales Halomonadaceae Halomonas 25 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 5 Bacteria Proteobacteria Clostridia Clostridiales Halobacteriaceae 19 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 41 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 9 Bacteria Proteobacteria Clostridia Clostridiales 122 Bacteria Euryarchaeota Actinobacteria Actinomycetales Halobacteriaceae Planctomyces 34 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae 25 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 50 Bacteria Actinobacteria Acidimicrobiia Acidimicrobiales C111 11 Bacteria Firmicutes Clostridia Clostridiales Spirochaetaceae 18 Bacteria Proteobacteria Clostridia Clostridiales Halobacteriaceae 9 Bacteria Euryarchaeota Acidimicrobiia Acidimicrobiales Halobacteriaceae Halorubrum 19 Bacteria Firmicutes Clostridia Actinomycetales Actinomycetaceae Actinomyces 75 Bacteria Proteobacteria Clostridia Bacteroidales 16 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 5 Bacteria Bacteroidetes Bacteroidia Bacteroidales Coriobacteriaceae Collinsella 66 Bacteria Firmicutes Clostridia Clostridiales 10 Bacteria Proteobacteria Betaproteobacteria Actinomycetales 8 Bacteria Proteobacteria Clostridia Clostridiales Lachnospiraceae Actinomyces 9 Bacteria Actinobacteria Actinobacteria Actinomycetales Glycomycetaceae Glycomyces 31 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 152 Bacteria Bacteroidetes Sva0725 Sva0725 8 Bacteria Firmicutes Clostridia Actinomycetales Actinomycetaceae Actinomyces 11 Bacteria Proteobacteria Actinobacteria Actinomycetales Ruminococcaceae Glycomyces 7 Bacteria Firmicutes Clostridia Clostridiales 5 Bacteria Firmicutes Clostridia Clostridiales Phycisphaeraceae 6 Bacteria Firmicutes Thermoplasmata E2 15 Bacteria Proteobacteria Clostridia Clostridiales 3553 Bacteria Proteobacteria Clostridia Clostridiales 21 Bacteria Actinobacteria Actinobacteria Actinomycetales Prevotellaceae Prevotella 10 Bacteria Euryarchaeota Thermoplasmata E2 11 Bacteria Cyanobacteria Chloroplast Chlorophyta 54 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 50 Bacteria Firmicutes Clostridia Clostridiales Erysipelotrichaceae 22 Bacteria Firmicutes Clostridia Clostridiales 5 Bacteria Proteobacteria Actinobacteria Actinomycetales Thermoproteaceae Pyrobaculum 10 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 19 Bacteria Firmicutes Clostridia Clostridiales 6 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 11 Bacteria Firmicutes Clostridia Clostridiales 56 Bacteria Proteobacteria Clostridia Clostridiales 11 Bacteria Proteobacteria Alphaproteobacteria RF39 13 Bacteria Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 7 Bacteria Actinobacteria Actinobacteria Actinomycetales Coriobacteriaceae 3 Bacteria Proteobacteria Bacteroidia Bacteroidales 119 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Corynebacterium 8 Bacteria Firmicutes Clostridia E2 19 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 170 Bacteria Proteobacteria Deltaproteobacteria E2 30 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 22335 Bacteria Firmicutes Clostridia Clostridiales 18 Bacteria Proteobacteria Clostridia Clostridiales 5680 Bacteria Euryarchaeota Thermoplasmata E2 WSA2 304 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 63 Bacteria Firmicutes Thermoplasmata E2 672 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 96 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 86 Bacteria Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium 16 Bacteria Firmicutes Thermoplasmata E2 884 Bacteria Firmicutes Clostridia Clostridiales Peptococcaceae 152 Bacteria Firmicutes Clostridia Clostridiales Corynebacterium 22 Bacteria Firmicutes Clostridia Clostridiales 11 Bacteria Firmicutes Clostridia Clostridiales Corynebacteriaceae Corynebacterium 114 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 45 Bacteria Proteobacteria Alphaproteobacteria Clostridiales 20 Bacteria Firmicutes Clostridia Clostridiales 41 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 25 Bacteria Firmicutes Clostridia Clostridiales 44 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 38 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 895 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 1486 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 44 Bacteria Proteobacteria Actinobacteria Actinomycetales Ruminococcaceae 344 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 30 Bacteria Firmicutes Clostridia Clostridiales 24 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 73 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Lactobacillus 40 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 170 Bacteria Firmicutes Clostridia Clostridiales 14 Bacteria Proteobacteria Deltaproteobacteria E2 51 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 11 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Anaerococcus 1126 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 7 Bacteria Firmicutes Clostridia Clostridiales 65 Bacteria Firmicutes Bacilli Clostridiales 56 Bacteria Firmicutes Bacilli Clostridiales Bacillaceae 55 Bacteria Proteobacteria Deltaproteobacteria Clostridiales Veillonellaceae 22 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 31 Bacteria Proteobacteria Deltaproteobacteria E2 Marine_group_II 67 Bacteria Proteobacteria Thermoplasmata E2 TMEG 468 Bacteria Firmicutes Clostridia Clostridiales 1675 Bacteria Euryarchaeota Thermoplasmata E2 361 Bacteria Cyanobacteria Chloroplast E2 mitochondria 51 Bacteria Euryarchaeota Thermoplasmata Clostridiales 621 Bacteria Euryarchaeota Thermoplasmata E2 11 Bacteria Firmicutes Clostridia Clostridiales Pseudonocardiaceae Saccharopolyspora 621 Bacteria Proteobacteria Deltaproteobacteria E2 105 Bacteria Euryarchaeota Thermoplasmata E2 Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 8 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 255 Bacteria Firmicutes Clostridia Clostridiales Anaerococcus 9 Bacteria Proteobacteria Clostridia Clostridiales mitochondria 20 Bacteria Proteobacteria Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 14 Bacteria Euryarchaeota Thermoplasmata E2 14 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 52 Bacteria Crenarchaeota MCG 22 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 11 Bacteria Euryarchaeota Clostridia Methanobacteriales 123 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 11 Bacteria Euryarchaeota Thermoplasmata E2 26 Bacteria Euryarchaeota Clostridia Clostridiales 32 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 16 Bacteria Euryarchaeota Thermoplasmata E2 47 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 130 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 1398 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 9 Bacteria Firmicutes Clostridia Clostridiales 38 Bacteria Firmicutes Bacilli E2 Lactobacillaceae Lactobacillus 70 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 32 Bacteria Euryarchaeota Thermoplasmata E2 63 Bacteria Proteobacteria Clostridia Clostridiales 17 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 47 Bacteria Proteobacteria Alphaproteobacteria E2 206 Bacteria Proteobacteria Clostridia Clostridiales Xenococcaceae 81 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 25 Bacteria Euryarchaeota Methanobacteria Methanobacteriales 44 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 177 Bacteria Euryarchaeota Clostridia Clostridiales 5 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae 315 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 92 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 51 Bacteria Proteobacteria Alphaproteobacteria E2 Marine_group_II 157 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Ruminococcaceae 7 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae 29 Bacteria Euryarchaeota Clostridia Clostridiales DHVEG 1131 Bacteria Firmicutes Clostridia Clostridiales 4 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 3 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 71 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 98 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 94 Bacteria Proteobacteria Thermoplasmata E2 mitochondria 169 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 90 Bacteria Proteobacteria Thermoplasmata E2 Desulfobulbaceae 144 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Geobacillus Faecalibacterium_prausnitzii 6 Bacteria Proteobacteria Actinobacteria Actinomycetales 24 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 260 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 13 Bacteria Euryarchaeota Thermoplasmata E2 28 Bacteria Proteobacteria Clostridia E2 Prevotellaceae Prevotella 89 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 29 Bacteria Proteobacteria Thermoplasmata E2 mitochondria 24 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 33 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcus 415 Bacteria Proteobacteria Clostridia Clostridiales 47 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 167 Bacteria Proteobacteria Thermoplasmata E2 Fusobacteriaceae 13 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 125 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 21 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae 71 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 24 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 33 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 180 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 4 Bacteria Firmicutes Clostridia Clostridiales Xenococcaceae 1621 Bacteria Firmicutes Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 3 Bacteria Proteobacteria Clostridia Clostridiales 9 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 449 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 20 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 62 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 18 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 129 Bacteria Firmicutes Clostridia Actinomycetales 96 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 97 Bacteria Euryarchaeota Thermoplasmata E2 141 Bacteria Firmicutes Clostridia Clostridiales Prevotellaceae Prevotella 4 Bacteria Firmicutes Thermoplasmata E2 Marine_group_II 8 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 522 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae 141 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae 39 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 52 Bacteria Euryarchaeota Thermoplasmata Thermoplasmatales Picrophilaceae Thermogymnomonas 9 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 8 Bacteria Euryarchaeota Clostridia Actinomycetales 20 Bacteria Firmicutes Clostridia Clostridiales Veillonellaceae 109 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae 26 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Ruminococcaceae 68 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 4 Bacteria Proteobacteria Clostridia Clostridiales 54 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 149 Bacteria Firmicutes Clostridia Clostridiales 90 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 31 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 17 Bacteria Euryarchaeota Thermoplasmata E2 28 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 187 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 22 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Ruminococcaceae 94 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 19 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 4 Bacteria Euryarchaeota Thermoplasmata E2 36 Bacteria Proteobacteria Clostridia Clostridiales Chthoniobacter 319 Bacteria Euryarchaeota Thermoplasmata E2 11 Bacteria Firmicutes Clostridia Clostridiales Isosphaeraceae 15 Bacteria Firmicutes Clostridia Clostridiales Marine_group_II 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Sneathia 216 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 78 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 96 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 26 Bacteria Euryarchaeota Clostridia Clostridiales 318 Bacteria Cyanobacteria Chloroplast E2 vadinCA11 1819 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 330 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 178 Bacteria Proteobacteria Alphaproteobacteria Clostridiales 22 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Proteobacteria Clostridia Clostridiales Marine_group_II 16 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 155 Bacteria Proteobacteria Clostridia Clostridiales 41 Bacteria Proteobacteria Thermoplasmata E2 13 Bacteria Firmicutes Clostridia Clostridiales 52 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 33 Bacteria Firmicutes Clostridia Clostridiales Cenarchaeaceae Nitrosopumilus 16 Bacteria Proteobacteria Clostridia Clostridiales mitochondria 40 Bacteria Proteobacteria Clostridia Clostridiales 39 Bacteria Proteobacteria Thermoplasmata E2 31 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 11 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Euryarchaeota Thermoplasmata E2 23 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 11 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 5 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 55 Bacteria Euryarchaeota Thermoplasmata E2 208 Bacteria Euryarchaeota Clostridia Clostridiales 4 Bacteria Euryarchaeota Thermoplasmata E2 32 Bacteria Proteobacteria Chloroplast Clostridiales 8 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 7 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 57 Bacteria Proteobacteria Thermoplasmata E2 23 Bacteria Euryarchaeota Methanobacteria Methanobacteriales 46 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 27 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 17 Bacteria Firmicutes Clostridia Clostridiales Methylophilaceae 130 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 41 Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae SargSea 18 Bacteria Firmicutes Clostridia Clostridiales 12 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 13 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 17 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Hyphomicrobiaceae 31 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae 78 Bacteria Firmicutes Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 570 Bacteria Firmicutes Clostridia Clostridiales DHVEG 420 Bacteria Firmicutes Clostridia Clostridiales Marine_group_III 22 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 16 Bacteria Firmicutes Clostridia E2 DHVEG 101 Bacteria Proteobacteria Alphaproteobacteria E2 37 Bacteria Proteobacteria Clostridia E2 Ruminococcaceae 29 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 34 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 21 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 979 Bacteria Firmicutes Bacilli Actinomycetales Brevibacteriaceae Brevibacterium 96 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3628 Bacteria Firmicutes Clostridia Clostridiales 65 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 19 Bacteria Euryarchaeota Thermoplasmata E2 7 Bacteria Firmicutes Bacilli Clostridiales 24 Bacteria Proteobacteria Thermoplasmata E2 mitochondria 10 Bacteria Proteobacteria Gammaproteobacteria Actinomycetales Actinomycetaceae Staphylococcus 45 Bacteria Firmicutes Thermoplasmata Clostridiales DHVEG 11 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 9 Bacteria Firmicutes Thermoplasmata E2 14 Bacteria Proteobacteria Alphaproteobacteria E2 mitochondria 163 Bacteria Firmicutes Clostridia Clostridiales Sphingomonadaceae Kaistobacter 246 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 19 Bacteria Proteobacteria Thermoplasmata E2 303 Bacteria Euryarchaeota Clostridia Clostridiales Halobacteriaceae 106 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 40 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 30 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Ruminococcaceae 72 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 30 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae 10 Bacteria Proteobacteria Clostridia Clostridiales Marine_group_II 42 Bacteria Firmicutes Clostridia Clostridiales Lactobacillaceae Lactobacillus 18 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 32 Bacteria Euryarchaeota Thermoplasmata E2 Asteroleplasma 10 Bacteria Proteobacteria Alphaproteobacteria E2 Sphingomonadaceae 18 Bacteria Firmicutes Clostridia Clostridiales 12 Bacteria Firmicutes Clostridia Clostridiales 22 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 54 Bacteria Proteobacteria Clostridia Clostridiales Fusobacteriaceae Fusobacterium 24 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 12264 Bacteria Firmicutes Clostridia Clostridiales 17 Bacteria Firmicutes Thermoplasmata E2 Marine_group_II 6 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae 12 Bacteria Firmicutes Bacilli Clostridiales Bacillaceae 16 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae Stenotrophomonas 9 Bacteria Proteobacteria Clostridia Clostridiales Peptoniphilus 9 Bacteria Proteobacteria Thermoplasmata E2 20 Bacteria Firmicutes Clostridia Clostridiales 20 Bacteria Firmicutes Thermoplasmata E2 20 Bacteria Cyanobacteria Clostridia Clostridiales Ruminococcaceae 49 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 46 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 3 Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Spirochaetaceae Treponema 51 Bacteria Firmicutes Clostridia Clostridiales 115 Bacteria Proteobacteria Thermoplasmata E2 12 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 30 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 19 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 166 Bacteria Euryarchaeota Thermoplasmata E2 22 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 274 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Gemmataceae Gemmata 41 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 44 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 9 Bacteria Euryarchaeota Thermoplasmata E2 48 Bacteria Firmicutes Clostridia Clostridiales 22 Bacteria Proteobacteria Clostridia Clostridiales 11 Bacteria Proteobacteria Clostridia E2 521 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 63 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 28 Bacteria Proteobacteria Alphaproteobacteria Bacillales mitochondria 8 Bacteria Proteobacteria Clostridia Clostridiales mitochondria 33 Bacteria Firmicutes Clostridia Clostridiales 324 Bacteria Proteobacteria Clostridia Clostridiales mitochondria 10 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 22 Bacteria Firmicutes Thermoplasmata E2 111 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 30 Bacteria Proteobacteria Alphaproteobacteria Methanobacteriales 21 Bacteria Euryarchaeota Thermoplasmata E2 14 Bacteria Euryarchaeota Thermoplasmata E2 245 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 12 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 65 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 13 Bacteria Firmicutes Thermoplasmata E2 Fusobacteriaceae 340 Bacteria Proteobacteria Thermoplasmata E2 Mycoplasmataceae 18 Bacteria Firmicutes Clostridia Clostridiales 5 Bacteria Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium 49 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 14 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 122 Bacteria Firmicutes Clostridia Clostridiales 9 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae Prevotella 8 Bacteria Euryarchaeota Thermoplasmata E2 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 14 Bacteria Proteobacteria Chloroplast Clostridiales Ruminococcaceae 11 Bacteria Euryarchaeota Thermoplasmata E2 13 Bacteria Firmicutes Bacilli Clostridiales mitochondria 163 Bacteria Firmicutes Clostridia Clostridiales Faecalibacterium Faecalibacterium_prausnitzii 66 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 117 Bacteria Proteobacteria Mollicutes Clostridiales Mycoplasmataceae 4717 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 5 Bacteria Firmicutes Clostridia Clostridiales 14 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 20 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 57 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 26 Bacteria Euryarchaeota Thermoplasmata E2 Candidatus_Nitrososphaera 7 Bacteria Euryarchaeota Thermoplasmata E2 5 Bacteria Euryarchaeota Clostridia Clostridiales TMEG 80 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Sphingomonadaceae 93 Bacteria Proteobacteria Thermoplasmata E2 Mycoplasmataceae Mycoplasma 380 Bacteria Euryarchaeota Thermoplasmata E2 53 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria Bacteroidetes Bacteroidia Bacteroidales Pirellulaceae 8 Bacteria Firmicutes Clostridia Clostridiales 14 Bacteria Proteobacteria Clostridia Clostridiales DHVEG 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcus 5 Bacteria Firmicutes Clostridia Clostridiales DHVEG 35 Bacteria Firmicutes Clostridia Clostridiales 32 Bacteria Firmicutes Clostridia Clostridiales Peptoniphilus 13 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae Fusobacterium 893 Bacteria Euryarchaeota Thermoplasmata E2 15 Bacteria Firmicutes Clostridia E2 Lactobacillaceae 14 Bacteria Firmicutes Clostridia Clostridiales 33 Bacteria Proteobacteria Thermoplasmata E2 11 Bacteria Proteobacteria Clostridia Clostridiales Mycoplasmataceae 15 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 221 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Firmicutes Clostridia E2 Ruminococcaceae 7 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 167 Bacteria Euryarchaeota Alphaproteobacteria Rickettsiales mitochondria 183 Bacteria Firmicutes Bacilli Clostridiales Paenibacillaceae Paenibacillus 89 Bacteria Firmicutes Clostridia Clostridiales 25 Bacteria Firmicutes Clostridia Clostridiales 25 Bacteria Firmicutes Clostridia Clostridiales Gemmataceae 1404 Bacteria Firmicutes Thermoplasmata E2 15 Bacteria Proteobacteria Alphaproteobacteria E2 DHVEG 32 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 22 Bacteria Firmicutes Clostridia E2 Ruminococcaceae 573 Bacteria Firmicutes Clostridia Clostridiales Mycoplasmataceae 251 Bacteria Euryarchaeota Thermoplasmata E2 Nitrososphaeraceae Candidatus_Nitrososphaera 6 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 13 Bacteria Firmicutes Bacilli Bacteroidales Gemmataceae Gemmata 43 Bacteria Firmicutes Clostridia Clostridiales Anaeroplasmataceae Asteroleplasma 4 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae 16 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 10 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 11 Bacteria Proteobacteria Clostridia Clostridiales mitochondria 54 Bacteria Euryarchaeota Thermoplasmata E2 38 Bacteria Cyanobacteria Chloroplast Clostridiales 39 Bacteria Firmicutes Thermoplasmata E2 DHVEG 201 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 19 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 7 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 5 Bacteria Proteobacteria Clostridia Clostridiales Spirochaetaceae 34 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Planctomyces 434 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 69 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 12 Bacteria Proteobacteria Gammaproteobacteria Clostridiales DHVEG 5 Bacteria Firmicutes Clostridia Clostridiales At425_EubF1 8 Bacteria Firmicutes Clostridia E2 Marine_group_II 22 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 646 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 45 Bacteria Proteobacteria Alphaproteobacteria Actinomycetales Rhodobacteraceae 48 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 440 Bacteria Firmicutes Clostridia Clostridiales 4 Bacteria Proteobacteria Bacteroidia Bacteroidales 26 Bacteria Planctomycetes Thermoprotei Gemmatales Halobacteriaceae 36 Bacteria Firmicutes Clostridia Clostridiales Bifidobacteriaceae Bifidobacterium 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3 Bacteria Crenarchaeota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum 3 Bacteria Crenarchaeota Thermoprotei Clostridiales Thermoproteaceae 51 Bacteria Proteobacteria Deltaproteobacteria Clostridiales 19 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 6 Bacteria Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae Treponema 14 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria Bacteroidetes Bacteroidia Bacteroidales Sphingobacteriaceae 4 Bacteria Proteobacteria Deltaproteobacteria 5 Bacteria Firmicutes Gammaproteobacteria Clostridiales Erysipelotrichaceae Allobaculum 4 Bacteria Bacteroidetes Bacteroidia Bacteroidales S24 7 Bacteria Proteobacteria Clostridia Clostridiales Gaiellaceae 3 Bacteria Proteobacteria Betaproteobacteria Flavobacteriales Flavobacteriaceae 3 Bacteria Firmicutes Clostridia Clostridiales 3 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Enterobacteriaceae 9 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus 3 Bacteria Actinobacteria Coriobacteriia Coriobacteriales Coriobacteriaceae Eggerthella Eggerthella_lenta 4 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 3 Bacteria Firmicutes Clostridia Clostridiales A4b 6 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Ectothiorhodospiraceae 6 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 18 Bacteria Proteobacteria Actinobacteria Actinomycetales Nocardioidaceae 782 Bacteria Proteobacteria Gammaproteobacteria Sva0725 9 Bacteria Planctomycetes Phycisphaerae Clostridiales 4 Bacteria Proteobacteria Deltaproteobacteria Bacteroidales 10 Bacteria Proteobacteria Flavobacteriia Flavobacteriales Flavobacteriaceae 275 Bacteria Proteobacteria Gammaproteobacteria Actinomycetales Cardiobacteriaceae Cardiobacterium 3 Bacteria Proteobacteria Betaproteobacteria ASSO 16 Bacteria Proteobacteria Betaproteobacteria Xanthomonadales Xanthomonadaceae 3 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Geobacter 22 Bacteria Acidobacteria DA052 Ellin6513 4 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 9 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 18 Bacteria Proteobacteria Anaerolineae Bacteroidales 3 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 4 Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus_zeae 4 Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae 5 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus 4 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales 3 Bacteria Planctomycetes Planctomycetia iii1 Pirellulaceae