8 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Oscillospira 22 Bacteria Firmicutes Clostridia Clostridiales Veillonellaceae Methanosaeta 5 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces 59 Bacteria Firmicutes Actinobacteria Actinomycetales Microbacteriaceae Planctomyces 12 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Ruminococcaceae 10 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3 Bacteria Crenarchaeota Methanomicrobia Actinomycetales 7 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 5 Bacteria Euryarchaeota Thermoplasmata E2 4 Bacteria Proteobacteria Clostridia Clostridiales 3 Bacteria Proteobacteria Clostridia Clostridiales Halobacteriaceae Glycomyces 12 Bacteria Firmicutes Clostridia Clostridiales Cenarchaeaceae Nitrosopumilus 135 Bacteria Actinobacteria Actinobacteria Actinomycetales 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3 Bacteria Firmicutes Clostridia Clostridiales 6 Bacteria Proteobacteria Alphaproteobacteria Flavobacteriales Bdellovibrio 180 Bacteria Proteobacteria Clostridia Clostridiales 62 Bacteria Firmicutes Clostridia Clostridiales 108 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Mycoplasma 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 29 Bacteria Proteobacteria Gammaproteobacteria Fusobacteriales Leptotrichiaceae Corynebacterium 451 Bacteria Cyanobacteria Chloroplast E2 11 Bacteria Firmicutes Clostridia Clostridiales 62 Bacteria Proteobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces 5 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 519 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 3247 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 4 Bacteria Firmicutes Clostridia Clostridiales Streptococcaceae Streptococcus 32 Bacteria Proteobacteria Thermoplasmata E2 2139 Bacteria Firmicutes Clostridia Clostridiales Corynebacteriaceae Corynebacterium 8 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 18 Bacteria Actinobacteria Actinobacteria Actinomycetales 482 Bacteria Firmicutes Clostridia E2 7423 Bacteria Euryarchaeota Thermoplasmata E2 30 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 5 Bacteria Firmicutes Clostridia Clostridiales Flavobacteriaceae Oscillospira 10 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 468 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 9 Bacteria Firmicutes Clostridia Clostridiales 7 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 231 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 9 Bacteria Firmicutes Bacilli E2 Bacillaceae 3 Bacteria Firmicutes Clostridia Clostridiales 13 Bacteria Euryarchaeota Thermoplasmata E2 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 585 Bacteria Firmicutes Clostridia Clostridiales 958 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 55 Bacteria Euryarchaeota Thermoplasmata E2 Synechococcaceae Prochlorococcus 235 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 1630 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 2248 Bacteria Euryarchaeota Clostridia Clostridiales 31 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Ruminococcaceae 99 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 259 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 50 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 618 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 4 Bacteria Euryarchaeota Thermoplasmata E2 262 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 1206 Bacteria Firmicutes Clostridia Clostridiales Marine_group_II 3 Bacteria Euryarchaeota Thermoplasmata E2 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 14 Bacteria Euryarchaeota Thermoplasmata E2 351 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Desulfotomaculum 5 Bacteria Actinobacteria Actinobacteria Actinomycetales 14 Bacteria Euryarchaeota Thermoplasmata E2 14 Bacteria Firmicutes Actinobacteria Actinomycetales Fusobacteriaceae Fusobacterium 9 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 9 Bacteria Euryarchaeota Thermoplasmata E2 32 Bacteria Proteobacteria Thermoplasmata E2 4 Bacteria Euryarchaeota Thermoplasmata E2 9 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Firmicutes Clostridia Clostridiales 7 Bacteria Euryarchaeota Thermoplasmata E2 TMEG 20 Bacteria Proteobacteria Clostridia Clostridiales DHVEG 523 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 51 Bacteria Firmicutes Thermoplasmata E2 Nitrososphaeraceae Candidatus_Nitrososphaera 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Proteobacteria Thermoplasmata Methanobacteriales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 387 Bacteria Firmicutes Clostridia Clostridiales 49 Bacteria Firmicutes Planctomycetia Planctomycetales Planctomycetaceae Planctomyces 4 Bacteria Euryarchaeota Thermoplasmata E2 9 Bacteria Firmicutes Clostridia Clostridiales 3 Bacteria Cyanobacteria Synechococcophycideae Clostridiales Pseudanabaenaceae 7 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 238 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae Candidatus_Nitrososphaera 12 Bacteria Euryarchaeota Thermoplasmata E2 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Asteroleplasma 5 Bacteria Proteobacteria Thermoplasmata E2 18 Bacteria Cyanobacteria Thermoplasmata E2 Ruminococcaceae 29 Bacteria Euryarchaeota Thermoplasmata E2 WSA2 252 Bacteria Crenarchaeota Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 5541 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 250 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 7 Bacteria Euryarchaeota Thermoplasmata E2 15 Bacteria Cyanobacteria Thermoplasmata E2 Cenarchaeaceae 47 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 40 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 13 Bacteria Proteobacteria Clostridia Clostridiales Marine_group_II 11 Bacteria Proteobacteria Actinobacteria Actinomycetales Fusobacteriaceae Fusobacterium 29 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 555 Bacteria Proteobacteria Thermoplasmata E2 111 Bacteria Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 4 Bacteria Crenarchaeota Thaumarchaeota E2 Cenarchaeaceae Candidatus_Nitrososphaera 24 Bacteria Firmicutes Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 5 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 9 Bacteria Euryarchaeota Clostridia Clostridiales 22 Bacteria Proteobacteria Clostridia Clostridiales Propionibacteriaceae Propionibacterium Propionibacterium_acnes 51 Bacteria Firmicutes Clostridia Clostridiales 4 Bacteria Crenarchaeota Clostridia Clostridiales 38 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 29 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 7 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 43 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 8 Bacteria Proteobacteria Clostridia Clostridiales Fusobacteriaceae Fusobacterium 35 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 63 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 77 Bacteria Proteobacteria Clostridia Clostridiales 20 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 53 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 48 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 7 Bacteria Firmicutes Clostridia Clostridiales Veillonellaceae 221 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 51 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 41 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 21 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 13 Bacteria Firmicutes Clostridia Clostridiales Bacillaceae Bacillus 135 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 44 Bacteria Euryarchaeota Thermoplasmata E2 Nitrososphaeraceae Candidatus_Nitrososphaera 4 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 35 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 3 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 82 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 44 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 14 Bacteria Crenarchaeota Clostridia Clostridiales 26 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 15 Bacteria Proteobacteria Clostridia Clostridiales Leptotrichiaceae 5 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 3 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae 19 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 95 Bacteria Firmicutes Clostridia Clostridiales 4 Bacteria Firmicutes Clostridia Clostridiales DHVEG 27 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 11 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 16 Bacteria Proteobacteria Clostridia E2 Ruminococcaceae 10 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 12 Bacteria Crenarchaeota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium 5 Bacteria Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Candidatus_Portiera 8 Bacteria Proteobacteria Thermoplasmata E2 154 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 60 Bacteria Firmicutes Clostridia Clostridiales 4 Bacteria Proteobacteria Clostridia Clostridiales Halomonadaceae Candidatus_Portiera 3 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 31 Bacteria Firmicutes Clostridia Clostridiales 3 Bacteria Proteobacteria Thermoplasmata E2 vadinCA11 15 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 5 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 4 Bacteria Firmicutes Bacilli Clostridiales Desulfobulbaceae Streptococcus 26 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 31 Bacteria Proteobacteria Clostridia Clostridiales 51 Bacteria Firmicutes Clostridia Clostridiales 9 Bacteria Firmicutes Thermoplasmata E2 DHVEG 48 Bacteria Euryarchaeota Thermoplasmata E2 27 Bacteria Firmicutes Clostridia Clostridiales 12 Bacteria Firmicutes Clostridia Clostridiales Veillonellaceae 6 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 3 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 40 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 14 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Alteromonadaceae Microbulbifer 3 Bacteria Proteobacteria Clostridia Clostridiales Pseudomonadaceae Pseudomonas 9 Bacteria Proteobacteria Clostridia Clostridiales Pelagibacteraceae 70 Bacteria Proteobacteria Clostridia Clostridiales Lachnospiraceae 54 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 7 Bacteria Firmicutes Clostridia Clostridiales Veillonellaceae 5 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 37 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 5053 Bacteria Firmicutes Clostridia Clostridiales vadinCA11 96 Bacteria Firmicutes Clostridia Clostridiales DHVEG 34 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 10 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 111 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Pseudomonadaceae Pseudomonas 12 Bacteria Proteobacteria Alphaproteobacteria E2 vadinCA11 4 Bacteria Euryarchaeota Thermoplasmata E2 15 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 17 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 57 Bacteria Euryarchaeota Thermoplasmata E2 9 Bacteria Proteobacteria Fusobacteriia Fusobacteriales Fusobacteriaceae u114 11 Bacteria Proteobacteria Thermoplasmata E2 3 Bacteria Proteobacteria Thermoplasmata E2 4 Bacteria Firmicutes Clostridia Clostridiales 3 Bacteria Firmicutes Clostridia Clostridiales Aquificaceae 10 Bacteria Firmicutes Clostridia Clostridiales DHVEG 8 Bacteria Firmicutes Alphaproteobacteria Clostridiales Ruminococcaceae 9 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 5 Bacteria Proteobacteria Thermoplasmata E2 19 Bacteria Euryarchaeota Thermoplasmata E2 57 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 54 Bacteria Proteobacteria Thermoplasmata E2 Desulfobulbaceae 5 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_III 23 Bacteria Euryarchaeota Thermoplasmata E2 201 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Sphingomonadaceae PSB 12 Bacteria Proteobacteria Thermoplasmata E2 5 Bacteria Euryarchaeota Thermoplasmata E2 10 Bacteria Euryarchaeota Thermoplasmata E2 34 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 5 Bacteria Euryarchaeota Thermoplasmata E2 10 Bacteria Firmicutes Clostridia Clostridiales Corynebacteriaceae Corynebacterium 7 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 26 Bacteria Proteobacteria Alphaproteobacteria E2 mitochondria 4 Bacteria Firmicutes Clostridia E2 Leuconostocaceae Leuconostoc 6 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 14 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 17 Bacteria Proteobacteria Clostridia Clostridiales 602 Bacteria Firmicutes Clostridia Clostridiales 13253 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 341 Bacteria Firmicutes Clostridia Clostridiales 58 Bacteria Firmicutes Clostridia Clostridiales Peptoniphilus 201 Bacteria Firmicutes Thermoplasmata E2 5 Bacteria Proteobacteria Thermoplasmata E2 7 Bacteria Firmicutes Clostridia Clostridiales mitochondria 22 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 58 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3 Bacteria Cyanobacteria Chloroplast E2 Ruminococcaceae 4 Bacteria Firmicutes Bacilli Bacillales Bacillaceae 20 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 15 Bacteria Firmicutes Clostridia Clostridiales Corynebacteriaceae Corynebacterium 22 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 7 Bacteria Firmicutes Clostridia Clostridiales 129 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Gammaproteobacteria E2 Anaeroplasmataceae Asteroleplasma 5 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 10 Bacteria Firmicutes Clostridia Clostridiales 131 Bacteria Firmicutes Thermoplasmata E2 Planococcaceae Solibacillus 8 Bacteria Proteobacteria Alphaproteobacteria E2 140 Bacteria Proteobacteria Alphaproteobacteria E2 DHVEG 3 Bacteria Firmicutes Clostridia Clostridiales Bacillaceae 6 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 181 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 10 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 175 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Fusobacterium 5 Bacteria Firmicutes Clostridia Clostridiales 5 Bacteria Firmicutes Thermoplasmata E2 BHI80 3 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 12 Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae 6 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Firmicutes Clostridia Bacteroidales RFP12 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales 10 Bacteria Euryarchaeota Thermoplasmata E2 4 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae Fusobacterium 7 Bacteria Firmicutes Bacilli Clostridiales Fusobacteriaceae