6 Bacteria Proteobacteria Clostridia Clostridiales Streptomycetaceae Streptomyces 32 Bacteria Euryarchaeota Thermoplasmata E2 Fusobacteriaceae 19 Bacteria Bacteroidetes Bacteroidia Bacteroidales 29 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Oscillospira 8 Bacteria Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium 665 Bacteria Actinobacteria Actinobacteria Actinomycetales Planctomycetaceae Planctomyces 22 Bacteria Euryarchaeota Methanomicrobia Methanosarcinales Methanosaetaceae Methanosaeta 134 Bacteria Firmicutes Actinobacteria Actinomycetales Marine_group_II 274 Bacteria Euryarchaeota Clostridia Clostridiales Veillonellaceae 7 Bacteria Firmicutes Clostridia Clostridiales Veillonellaceae 24 Bacteria Actinobacteria Actinobacteria Actinomycetales Microbacteriaceae 3 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 8 Bacteria Proteobacteria Gammaproteobacteria Actinomycetales Halomonadaceae Candidatus_Portiera 4 Bacteria Proteobacteria Alphaproteobacteria E2 Marine_group_II 14 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 34 Bacteria Firmicutes Actinobacteria Clostridiales Veillonellaceae Actinomyces 3 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae 4 Bacteria Proteobacteria Alphaproteobacteria E2 4 Bacteria Firmicutes Actinobacteria Actinomycetales Lachnospiraceae Actinomyces 54 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Ruminococcaceae 5 Bacteria Proteobacteria Thermoplasmata E2 8 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 5 Bacteria Proteobacteria Betaproteobacteria Planctomycetales Planctomycetaceae Planctomyces 6 Bacteria Firmicutes Clostridia Clostridiales Cenarchaeaceae Nitrosopumilus 37 Bacteria Proteobacteria Actinobacteria Actinomycetales Neisseriaceae Neisseria 13 Bacteria Actinobacteria Actinobacteria Actinomycetales 1838 Bacteria Actinobacteria Acidimicrobiia Acidimicrobiales Veillonellaceae 7 Bacteria Firmicutes Clostridia Clostridiales Mamiellaceae 6 Bacteria Proteobacteria Clostridia Clostridiales Syntrophobacteraceae 49 Bacteria Firmicutes Clostridia Clostridiales Mamiellaceae 129 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 30 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Mollicutes Clostridiales Mycoplasmataceae Mycoplasma 9 Bacteria Actinobacteria Actinobacteria Actinomycetales Micrococcaceae 5 Bacteria Firmicutes Actinobacteria Actinomycetales Flavobacteriaceae Actinomyces 4 Bacteria Euryarchaeota Deltaproteobacteria E2 Methanosarcinaceae Methanosarcina 62 Bacteria Proteobacteria Clostridia Clostridiales DHVEG 6 Bacteria Proteobacteria Clostridia Clostridiales Lachnospiraceae 9 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Thermoplasmata E2 6 Bacteria Firmicutes Bacilli Clostridiales Actinomycetaceae 28 Bacteria Proteobacteria Clostridia Clostridiales Phormidiaceae Succiniclasticum 11 Bacteria Euryarchaeota Clostridia Clostridiales Halobacteriaceae 15 Bacteria Proteobacteria Clostridia Clostridiales Veillonellaceae 6 Bacteria Firmicutes Clostridia Clostridiales Corynebacteriaceae Corynebacterium 67 Bacteria Firmicutes Clostridia Clostridiales Lactobacillaceae Lactobacillus 105 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 6 Bacteria Firmicutes Clostridia Clostridiales Marine_group_II 10 Bacteria Firmicutes Thermoplasmata E2 mitochondria 5 Bacteria Euryarchaeota Thermoplasmata E2 4 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae 16 Bacteria Actinobacteria Acidimicrobiia Acidimicrobiales DHVEG 13 Bacteria Firmicutes Clostridia Clostridiales 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcus 21 Bacteria Actinobacteria Clostridia Clostridiales 6 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Sphingomonadaceae 9 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcus 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 27 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 390 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Hyphomicrobiaceae 3 Bacteria Euryarchaeota Thermoplasmata E2 4 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 4 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 20 Bacteria Proteobacteria Clostridia Clostridiales Fusobacteriaceae Cetobacterium Cetobacterium_somerae 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Proteobacteria Actinobacteria Actinomycetales Ruminococcaceae 13 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Firmicutes Actinobacteria Actinomycetales Ruminococcaceae Corynebacterium 14 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Sphingomonadaceae Methanosaeta 535 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 7 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus 74 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Verrucomicrobiaceae 5 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 13 Bacteria Firmicutes Clostridia Clostridiales 2681 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 10 Bacteria Firmicutes Clostridia Clostridiales 11306 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 5 Bacteria Proteobacteria Clostridia Clostridiales TMEG 441 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 26 Bacteria Euryarchaeota Actinobacteria Actinomycetales Actinomycetaceae 18 Bacteria Proteobacteria Clostridia Clostridiales Mycoplasmataceae Mycoplasma 22 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae Propionibacterium Propionibacterium_acnes 3 Bacteria Proteobacteria Clostridia Clostridiales Veillonellaceae 17 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae Thermogymnomonas 16 Bacteria Proteobacteria Thermoplasmata E2 TMEG 18 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 152 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 156 Bacteria Proteobacteria Thermoplasmata E2 12 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_III 29 Bacteria Proteobacteria Clostridia Clostridiales NS9 1494 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 1417 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 707 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 1074 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 29 Bacteria Firmicutes Clostridia Clostridiales Bacillaceae 10 Bacteria Crenarchaeota MCG 18 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 17 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 90 Bacteria Firmicutes Thermoplasmata E2 DHVEG 19 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae Photobacterium 82 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 21 Bacteria Proteobacteria Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 20 Bacteria Proteobacteria Alphaproteobacteria Bacillales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 848 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 664 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 67 Bacteria Proteobacteria Clostridia Clostridiales DHVEG 80 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Nitrososphaeraceae Candidatus_Nitrososphaera 161 Bacteria Euryarchaeota Actinobacteria Actinomycetales Marine_group_II 129 Bacteria Firmicutes Clostridia Clostridiales Legionellaceae 138 Bacteria Proteobacteria Thermoplasmata E2 Pseudanabaenaceae Prochlorothrix Prochlorothrix_hollandica 63 Bacteria Proteobacteria Deltaproteobacteria Clostridiales 10 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 1039 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 3 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera 20 Bacteria Firmicutes Thermoplasmata Lactobacillales Streptococcaceae Streptococcus 7 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 15 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 19 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 10 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7997 Bacteria Euryarchaeota Thermoplasmata E2 Flavobacteriaceae 3349 Bacteria Firmicutes Clostridia Clostridiales 63 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae Fusobacterium 3926 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 21 Bacteria Proteobacteria Thermoplasmata E2 2343 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 49 Bacteria Euryarchaeota Thermoplasmata E2 359 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 9 Bacteria Proteobacteria Clostridia E2 Ruminococcaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 88 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 23 Bacteria Euryarchaeota Clostridia Clostridiales Phormidiaceae Planktothricoides 16 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 11 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 11 Bacteria Cyanobacteria Clostridia Clostridiales Xenococcaceae 517 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 64 Bacteria Firmicutes Clostridia Clostridiales 31 Bacteria Euryarchaeota Thermoplasmata E2 TMEG 172 Bacteria Proteobacteria Clostridia Clostridiales 66 Bacteria Firmicutes Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 8 Bacteria Firmicutes Clostridia Clostridiales Veillonellaceae 27 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Planctomyces 9 Bacteria Euryarchaeota Thermoplasmata E2 160 Bacteria Euryarchaeota Clostridia Clostridiales 39 Bacteria Euryarchaeota Thermoplasmata E2 TMEG 6 Bacteria Euryarchaeota Thermoplasmata E2 TMEG 343 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 1023 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 28 Bacteria Proteobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae 45 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 83 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 5 Bacteria Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus 6 Bacteria Euryarchaeota Thermoplasmata E2 116 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 5 Bacteria Firmicutes Clostridia Clostridiales 149 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 35 Bacteria Proteobacteria Thermoplasmata E2 Sphingomonadaceae 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 24 Bacteria Firmicutes Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 10 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 208 Bacteria Firmicutes Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 372 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 227 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 17 Bacteria Bacteroidetes Clostridia Clostridiales Flavobacteriaceae 25 Bacteria Proteobacteria Clostridia Clostridiales 42 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 28 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 172 Bacteria Firmicutes Planctomycetia Clostridiales Pirellulaceae 36 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 40 Bacteria Euryarchaeota Thermoplasmata E2 Synechococcaceae 9 Bacteria Proteobacteria Clostridia Clostridiales 246 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 124 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 431 Bacteria Proteobacteria Clostridia Clostridiales 10 Bacteria Proteobacteria Gammaproteobacteria E2 Synechococcaceae Prochlorococcus 6 Bacteria Firmicutes Clostridia Clostridiales 589 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 8 Bacteria Proteobacteria Deltaproteobacteria Clostridiales Corynebacteriaceae Corynebacterium 166 Bacteria Firmicutes Clostridia Clostridiales DHVEG 4 Bacteria Proteobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces 9 Bacteria Proteobacteria Thermoplasmata E2 10 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 20 Bacteria Euryarchaeota Thermoplasmata E2 Sphingomonadaceae 13 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 190 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 45 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 12 Bacteria Firmicutes Clostridia E2 DHVEG 35 Bacteria Euryarchaeota Thermoplasmata E2 28 Bacteria Proteobacteria Thermoplasmata Clostridiales Ruminococcaceae 22 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 5 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 138 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 27 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 97 Bacteria Euryarchaeota Thermoplasmata E2 Nitrososphaeraceae Candidatus_Nitrososphaera 35 Bacteria Euryarchaeota Thermoplasmata E2 37 Bacteria Euryarchaeota Thermoplasmata E2 8 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 217 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 6 Bacteria Proteobacteria Thermoplasmata E2 mitochondria 4 Bacteria Firmicutes Clostridia Clostridiales Leptotrichiaceae 27 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 131 Bacteria Euryarchaeota Thermoplasmata E2 4 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 4 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 13 Bacteria Proteobacteria Thermoplasmata E2 Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 19 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 4 Bacteria Firmicutes Clostridia Clostridiales Propionibacteriaceae Propionibacterium 9 Bacteria Proteobacteria Thermoplasmata E2 Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 9 Bacteria Firmicutes Clostridia Clostridiales 9777 Bacteria Euryarchaeota Thermoplasmata E2 1242 Bacteria Firmicutes Clostridia Clostridiales DHVEG 93 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 381 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 144 Bacteria Euryarchaeota Thermoplasmata E2 203 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 471 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 371 Bacteria Firmicutes Clostridia Clostridiales 11 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae 39 Bacteria Proteobacteria Clostridia Clostridiales DHVEG 6 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 15 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 5 Bacteria Firmicutes Thermoplasmata E2 42 Bacteria Euryarchaeota Thermoplasmata E2 12 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 237 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Fusobacterium 198 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 354 Bacteria Euryarchaeota Actinobacteria Actinomycetales Fusobacteriaceae Candidatus_Nitrososphaera 13 Bacteria Euryarchaeota Thermoplasmata E2 12 Bacteria Proteobacteria Deltaproteobacteria Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 2870 Bacteria Proteobacteria Thermoplasmata E2 Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 17 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 15 Bacteria Proteobacteria Actinobacteria Actinomycetales Puniceicoccaceae Puniceicoccus 23 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 127 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 44 Bacteria Firmicutes Clostridia Clostridiales 9 Bacteria Firmicutes Clostridia Clostridiales 184 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 110 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 107 Bacteria Firmicutes Clostridia Clostridiales Anaeroplasmataceae 42 Bacteria Proteobacteria Chloroplast Cenarchaeales Cenarchaeaceae Nitrosopumilus 22 Bacteria Firmicutes Clostridia Clostridiales 295 Bacteria Proteobacteria Thermoplasmata E2 Xenococcaceae 53 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae Fusobacterium 51 Bacteria Euryarchaeota Thermoplasmata E2 Fusobacteriaceae Fusobacterium 84 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 24 Bacteria Firmicutes Clostridia Actinomycetales Chitinophagaceae Actinomyces 17 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 7 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Ruminococcaceae 6 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae 28 Bacteria Euryarchaeota Methanobacteria Methanobacteriales 6 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_III 6 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 23 Bacteria Firmicutes Clostridia Clostridiales Bacillaceae Propionibacterium Propionibacterium_acnes 13 Bacteria Proteobacteria Clostridia Clostridiales 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 65 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 6 Bacteria Firmicutes Clostridia Clostridiales DHVEG 143 Bacteria Fusobacteria Fusobacteriia Fusobacteriales Leptotrichiaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 89 Bacteria Euryarchaeota Thermoplasmata E2 27 Bacteria Cyanobacteria Synechococcophycideae Clostridiales Synechococcaceae Prochlorococcus 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 83 Bacteria Firmicutes Thermoplasmata E2 vadinCA11 453 Bacteria Firmicutes Bacilli Clostridiales Aerococcaceae Aerococcus 18 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 38 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 13 Bacteria Firmicutes Clostridia Clostridiales 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 11 Bacteria Firmicutes Clostridia Clostridiales 120 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 10 Bacteria Firmicutes Thermoplasmata E2 Fusobacteriaceae Fusobacterium 10 Bacteria Euryarchaeota Thermoplasmata E2 92 Bacteria Firmicutes Clostridia Clostridiales Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 15 Bacteria Proteobacteria MCG 35 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 350 Bacteria Cyanobacteria Clostridia Clostridiales Synechococcaceae Prochlorococcus 128 Bacteria Cyanobacteria Thermoplasmata E2 DHVEG 105 Bacteria Firmicutes Thermoplasmata E2 Marine_group_II 1109 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Planktothricoides 57 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 15 Bacteria Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 55 Bacteria Euryarchaeota Thermoplasmata E2 5 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 14 Bacteria Firmicutes Clostridia Clostridiales Fusobacterium 21 Bacteria Firmicutes Clostridia Clostridiales Corynebacteriaceae Corynebacterium 11 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 3 Bacteria Euryarchaeota Thermoplasmata E2 21 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Cyanobacteria Thermoplasmata E2 Cenarchaeaceae Nitrosopumilus 73 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 17 Bacteria Proteobacteria Clostridia Clostridiales 7 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 20 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 25 Bacteria Proteobacteria Deltaproteobacteria Clostridiales Ruminococcaceae 3 Bacteria Firmicutes Thermoplasmata E2 44 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae 110 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 17 Bacteria Firmicutes Thermoplasmata E2 5 Bacteria Firmicutes Clostridia Clostridiales Hyphomicrobiaceae Planctomyces 4 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 9 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 1603 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 25 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 128 Bacteria Firmicutes Clostridia Clostridiales 19 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 58 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae 6 Bacteria Firmicutes Clostridia Clostridiales Hyphomicrobiaceae Prevotella 42 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 20 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 27 Bacteria Firmicutes Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 8 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 12 Bacteria Firmicutes Clostridia Clostridiales Brocadiaceae Candidatus_Scalindua 39 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 102 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 12 Bacteria Euryarchaeota Thermoplasmata E2 Fusobacteriaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 78 Bacteria Euryarchaeota Thermoplasmata E2 4 Bacteria Firmicutes Clostridia Clostridiales 18 Bacteria Firmicutes Clostridia Clostridiales 492 Bacteria Firmicutes Clostridia Clostridiales Halobacteriaceae 7 Bacteria Firmicutes Clostridia Clostridiales Lactobacillaceae Lactobacillus 437 Bacteria Proteobacteria Bacilli Euglenozoa 8 Bacteria Euryarchaeota Thermoplasmata E2 Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 107 Bacteria Euryarchaeota Thermoplasmata E2 Fusobacteriaceae 87 Bacteria Firmicutes Clostridia Clostridiales 2370 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Bacillus 27 Bacteria Crenarchaeota MBGB 18 Bacteria Euryarchaeota Thermoplasmata E2 81 Bacteria Firmicutes Clostridia Clostridiales Mycoplasmataceae 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 11 Bacteria Firmicutes Clostridia Clostridiales 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 12 Bacteria Proteobacteria Alphaproteobacteria E2 Ruminococcaceae 8 Bacteria Firmicutes Thermoplasmata E2 vadinCA11 4 Bacteria Proteobacteria Thermoplasmata E2 6 Bacteria Firmicutes Thermoplasmata E2 42 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 1041 Bacteria Firmicutes Clostridia Clostridiales Helicobacteraceae 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 55 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 26 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 378 Bacteria Firmicutes Clostridia Clostridiales 360 Bacteria Proteobacteria Thermoplasmata E2 69 Bacteria Euryarchaeota Thermoplasmata E2 56 Bacteria Proteobacteria Clostridia Clostridiales Marine_group_II 60 Bacteria Firmicutes Clostridia E2 Ruminococcaceae 5 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 59 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 7 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 47 Bacteria Cyanobacteria Chloroplast E2 Veillonellaceae 24 Bacteria Proteobacteria Deltaproteobacteria Clostridiales 270 Bacteria Euryarchaeota Clostridia Clostridiales 38 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 36 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 56 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 14 Bacteria Proteobacteria Thermoplasmata E2 614 Bacteria Proteobacteria Clostridia Clostridiales Methylophilaceae 25 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 55 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 10 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 75 Bacteria Proteobacteria Thermoplasmata E2 vadinCA11 65 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 12 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 138 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 84 Bacteria Firmicutes Clostridia Clostridiales DHVEG 10 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 11 Bacteria Euryarchaeota Thermoplasmata E2 29 Bacteria Cyanobacteria Thermoplasmata E2 Marine_group_II 11 Bacteria Proteobacteria Clostridia Clostridiales DHVEG 5 Bacteria Proteobacteria Clostridia Clostridiales 29 Bacteria Proteobacteria Clostridia Clostridiales Methylophilaceae 6 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 10 Bacteria Proteobacteria Clostridia Clostridiales 7 Bacteria Firmicutes Clostridia Clostridiales 6 Bacteria Proteobacteria Mollicutes Acholeplasmatales Acholeplasmataceae 6 Bacteria Firmicutes Clostridia E2 5 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 35 Bacteria Firmicutes Thermoplasmata E2 17 Bacteria Euryarchaeota Thermoplasmata E2 13 Bacteria Proteobacteria Clostridia Clostridiales 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 5826 Bacteria Firmicutes Clostridia Clostridiales 160 Bacteria Firmicutes Clostridia Clostridiales DHVEG 6 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 18 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae Cetobacterium Cetobacterium_somerae 67 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 151 Bacteria Firmicutes Clostridia Clostridiales 50 Bacteria Cyanobacteria Thermoplasmata E2 Ruminococcaceae 8 Bacteria Euryarchaeota Thermoplasmata E2 49 Bacteria Euryarchaeota Thermoplasmata E2 37 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae Fusobacterium 6 Bacteria Proteobacteria Clostridia Clostridiales 15 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Ruminococcaceae 52 Bacteria Firmicutes Clostridia Clostridiales 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 36 Bacteria Proteobacteria Clostridia Clostridiales 3 Bacteria Euryarchaeota Thermoplasmata E2 4 Bacteria Firmicutes Clostridia Clostridiales Helicobacteraceae 58 Bacteria Proteobacteria Alphaproteobacteria E2 Ruminococcaceae vadinCA11 16 Bacteria Firmicutes Clostridia Clostridiales 11 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 27 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 9 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae 15 Bacteria Firmicutes Clostridia Clostridiales Cenarchaeaceae Nitrosopumilus 191 Bacteria Proteobacteria Thermoplasmata E2 4 Bacteria Proteobacteria Clostridia Clostridiales 10 Bacteria Proteobacteria Clostridia Clostridiales DHVEG 12 Bacteria Proteobacteria Clostridia Clostridiales 17 Bacteria Firmicutes Clostridia Clostridiales 6 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 17 Bacteria Proteobacteria Clostridia Clostridiales DHVEG 289 Bacteria Proteobacteria Clostridia Clostridiales DHVEG 10 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria Firmicutes Clostridia Clostridiales 4 Bacteria Proteobacteria Alphaproteobacteria Clostridiales 16 Bacteria Proteobacteria Clostridia Clostridiales Fusobacteriaceae 14 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 10 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 17 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae Fusobacterium 8 Bacteria Proteobacteria Mollicutes E2 Acholeplasmataceae Candidatus_Phytoplasma 24 Bacteria Firmicutes Clostridia Clostridiales 9 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Pseudomonas 3 Bacteria Proteobacteria Alphaproteobacteria E2 7 Bacteria Euryarchaeota Thermoplasmata E2 Aquificaceae 4 Bacteria Proteobacteria Clostridia Clostridiales 166 Bacteria Proteobacteria Thermoplasmata Clostridiales Ruminococcaceae 9 Bacteria Firmicutes Clostridia Clostridiales 204 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Halobacteriaceae 19 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Firmicutes Clostridia Clostridiales Marine_group_II 73 Bacteria Firmicutes Bacilli Bacillales Lachnospiraceae 31 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 65 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 2684 Bacteria Proteobacteria Clostridia Clostridiales 76 Bacteria Firmicutes Clostridia Clostridiales 195 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 3 Bacteria Cyanobacteria Thermoplasmata E2 DHVEG 8 Bacteria Proteobacteria Thermoplasmata E2 351 Bacteria Firmicutes Clostridia Clostridiales 160 Bacteria Firmicutes Clostridia Clostridiales Anaerococcus 22 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 19 Bacteria Proteobacteria Thermoplasmata E2 TMEG 9 Bacteria Euryarchaeota Thermoplasmata E2 48 Bacteria Firmicutes Thermoplasmata E2 Marine_group_II 20 Bacteria Euryarchaeota Thermoplasmata E2 Fusobacteriaceae 21 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 18 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 25 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 11 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 192 Bacteria Firmicutes Thermoplasmata E2 DHVEG 72 Bacteria Proteobacteria Clostridia Clostridiales DHVEG 6 Bacteria Firmicutes Thermoplasmata E2 3 Bacteria Firmicutes Bacilli Bacillales 3 Bacteria Euryarchaeota Thermoplasmata E2 3 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 6 Bacteria Proteobacteria Alphaproteobacteria E2 Ruminococcaceae 17 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Ruminococcaceae 21 Bacteria Firmicutes Clostridia Clostridiales Corynebacteriaceae Corynebacterium 16 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 9 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 16 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae 21 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 5 Bacteria Firmicutes Clostridia Clostridiales Mycoplasmataceae Mycoplasma 7 Bacteria Proteobacteria Thermoplasmata E2 7 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 18 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 69 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 16 Bacteria Proteobacteria Thermoplasmata E2 Erysipelotrichaceae PSB 14 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_III 5 Bacteria Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus 10 Bacteria Firmicutes Clostridia Clostridiales 4 Bacteria Firmicutes Thermoplasmata E2 24 Bacteria Euryarchaeota Thermoplasmata E2 565 Bacteria Firmicutes Clostridia Actinomycetales Lachnospiraceae Corynebacterium 34 Bacteria Firmicutes Clostridia E2 Planococcaceae 309 Bacteria Proteobacteria Alphaproteobacteria Clostridiales 26 Bacteria Firmicutes Bacilli Clostridiales Planococcaceae Lysinibacillus Lysinibacillus_boronitolerans 1183 Bacteria Firmicutes Clostridia Clostridiales 29 Bacteria Firmicutes Clostridia Clostridiales 34 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 97 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 89 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 4 Bacteria Firmicutes Bacilli Clostridiales Ruminococcaceae Lactobacillus 50 Bacteria Firmicutes Clostridia Clostridiales 242 Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium_perfringens 1642 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Paenibacillus 106 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 32 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 15 Bacteria Proteobacteria Thermoplasmata E2 6 Bacteria Euryarchaeota Thermoplasmata E2 13 Bacteria Firmicutes Clostridia Clostridiales Veillonellaceae 6 Bacteria Proteobacteria Clostridia Clostridiales 82 Bacteria Firmicutes Clostridia Clostridiales 54 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae Prochlorococcus 466 Bacteria Firmicutes Clostridia Clostridiales Bacillaceae 108 Bacteria Proteobacteria Alphaproteobacteria Clostridiales 49 Bacteria Proteobacteria Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera 38 Bacteria Firmicutes Clostridia E2 DHVEG 12 Bacteria Firmicutes Clostridia Clostridiales DHVEG 7 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 13 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 16 Bacteria Proteobacteria Gammaproteobacteria E2 Hydrogenobaculum 7 Bacteria Firmicutes Thermoplasmata E2 3 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 11 Bacteria Firmicutes Clostridia Clostridiales 118 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 21 Bacteria Euryarchaeota Thermoplasmata E2 TMEG 5 Bacteria Proteobacteria Clostridia Clostridiales Erythrobacteraceae 3 Bacteria Firmicutes Clostridia E2 Ruminococcaceae 48762 Bacteria Firmicutes Clostridia Clostridiales 21 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 117 Bacteria Euryarchaeota Thermoplasmata E2 2141 Bacteria Proteobacteria Clostridia Clostridiales Pseudanabaenaceae 16 Bacteria Proteobacteria Thermoplasmata E2 Pseudomonadaceae Pseudomonas 484 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 101 Bacteria Firmicutes Clostridia Clostridiales Planococcaceae Solibacillus 181 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 16 Bacteria Proteobacteria Thermoplasmata E2 37 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 19 Bacteria Firmicutes Clostridia Clostridiales Halobacteriaceae 13 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 53 Bacteria Firmicutes Thermoplasmata E2 TMEG 13 Bacteria Firmicutes Clostridia Clostridiales Prevotella 482 Bacteria Firmicutes Bacilli E2 Planococcaceae 624 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Proteobacteria Deltaproteobacteria Clostridiales 14 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 7 Bacteria Firmicutes Clostridia Clostridiales 816 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae 25 Bacteria Proteobacteria Alphaproteobacteria E2 Sphingomonadaceae 4 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae Corynebacterium 4 Bacteria Proteobacteria Mollicutes Clostridiales Mycoplasmataceae Mycoplasma 10 Bacteria Proteobacteria Clostridia Clostridiales Asteroleplasma 15 Bacteria Firmicutes Thermoplasmata E2 vadinCA11 2080 Bacteria Firmicutes Thermoplasmata E2 55 Bacteria Firmicutes Thermoplasmata E2 Hydrogenothermaceae 16 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 6 Bacteria Proteobacteria Clostridia Clostridiales Marine_group_II 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 30 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 31 Bacteria Firmicutes Clostridia Clostridiales Veillonellaceae 3 Bacteria Proteobacteria Clostridia Clostridiales 54 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 5 Bacteria Proteobacteria Clostridia Clostridiales mitochondria 10 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 19 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 3 Bacteria Firmicutes Alphaproteobacteria Clostridiales Ruminococcaceae 9 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae Fusobacterium 4 Bacteria Proteobacteria Phycisphaerae MSBL9 6 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces 4 Bacteria Firmicutes Clostridia Clostridiales 7 Bacteria Actinobacteria Actinobacteria Actinomycetales Xenococcaceae 7 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 10 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 8 Bacteria Proteobacteria Deltaproteobacteria Actinomycetales Desulfobacteraceae 8 Bacteria Actinobacteria Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium 6 Bacteria Proteobacteria Gammaproteobacteria E2 DHVEG 7 Bacteria Firmicutes Clostridia Clostridiales Solibacillus 4 Bacteria Euryarchaeota Actinobacteria Clostridiales 6 Bacteria Firmicutes Clostridia Clostridiales Anaerococcus 9 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Flavobacteriaceae 4 Bacteria Firmicutes Bacilli Bacillales Fusobacteriaceae Solibacillus 10 Bacteria Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus Faecalibacterium_prausnitzii 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Desulfotomaculum 3 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae 7 Bacteria Firmicutes Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium_somerae