6 Bacteria Chloroflexi Anaerolineae Bacteroidales Halobacteriaceae 18 Bacteria Proteobacteria Bacteroidia Bacteroidales 10 Bacteria Firmicutes Clostridia Clostridiales Bacillaceae 8 Bacteria Proteobacteria Bacteroidia Bacteroidales 42 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 6 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 5 Bacteria Proteobacteria Clostridia Clostridiales Acinetobacter 9 Bacteria Firmicutes Clostridia Clostridiales 11 Bacteria Firmicutes Clostridia Clostridiales Lactobacillaceae Lactobacillus 21 Bacteria Firmicutes Clostridia Clostridiales Halobacteriaceae 20 Bacteria Proteobacteria Alphaproteobacteria Actinomycetales Sphingomonadaceae 253 Bacteria Proteobacteria Alphaproteobacteria Clostridiales 12 Bacteria Proteobacteria Alphaproteobacteria Clostridiales 40 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Streptococcaceae Streptococcus 5 Bacteria Firmicutes Clostridia Clostridiales Coriobacteriaceae Collinsella Collinsella_aerofaciens 11 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 19 Bacteria Firmicutes Clostridia Clostridiales Halobacteriaceae Streptococcus 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 12 Bacteria Proteobacteria Actinobacteria Actinomycetales Marine_group_II 6 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 27 Bacteria Firmicutes Actinobacteria Actinomycetales Ruminococcaceae Propionibacterium Propionibacterium_acnes 13 Bacteria Actinobacteria Actinobacteria Actinomycetales 14 Bacteria Firmicutes Clostridia Clostridiales 10 Bacteria Proteobacteria Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium 3 Bacteria Proteobacteria Bacilli Actinomycetales mitochondria 13 Bacteria Bacteroidetes Bacteroidia Bacteroidales Verrucomicrobiaceae Akkermansia Akkermansia_muciniphila 8 Bacteria Actinobacteria Clostridia Actinomycetales Actinomycetaceae Actinomyces 21 Bacteria Proteobacteria Alphaproteobacteria Clostridiales 606 Bacteria Euryarchaeota Clostridia Clostridiales 3 Bacteria Proteobacteria Thermoplasmata E2 14 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 5 Bacteria Euryarchaeota Clostridia Clostridiales Cenarchaeaceae Nitrosopumilus 6 Bacteria Proteobacteria Deltaproteobacteria Clostridiales Cytophagaceae 3 Bacteria Proteobacteria Clostridia Clostridiales Veillonellaceae Selenomonas 10 Bacteria Proteobacteria Deltaproteobacteria E2 Spirochaetaceae DA101 3 Bacteria Firmicutes Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium 3 Bacteria Proteobacteria Chloroplast Clostridiales 16 Bacteria Firmicutes Clostridia Clostridiales Veillonellaceae 13 Bacteria Firmicutes Clostridia Clostridiales 14 Bacteria Proteobacteria Thermoplasmata E2 12 Bacteria Proteobacteria Clostridia Clostridiales 3 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 12 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Rhodobacteraceae 7 Bacteria Proteobacteria Betaproteobacteria Bacteroidales 8 Bacteria Proteobacteria DSEG 9 Bacteria Proteobacteria Bacilli E2 Cytophagaceae Methanosarcina 14 Bacteria Proteobacteria Thermoplasmata E2 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Mycoplasma 10 Bacteria Proteobacteria Clostridia Clostridiales 29 Bacteria Proteobacteria Deltaproteobacteria Clostridiales Anaeroplasmataceae Asteroleplasma 38 Bacteria Firmicutes Clostridia Clostridiales 44 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales Prevotellaceae Prevotella 21 Bacteria Euryarchaeota Thermoplasmata E2 17 Bacteria Proteobacteria Alphaproteobacteria 9 Bacteria Euryarchaeota Thermoplasmata E2 237 Bacteria Firmicutes Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium 36 Bacteria Firmicutes Bacilli Clostridiales Ruminococcaceae 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae vadinCA11 9 Bacteria Firmicutes Clostridia Clostridiales Corynebacterium 42 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 3 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 28 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 25 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 17 Bacteria Proteobacteria Thermoplasmata E2 5 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Corynebacterium 13 Bacteria Firmicutes Bacilli Clostridiales Picrophilaceae Thermogymnomonas 9101 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 528 Bacteria Firmicutes Bacilli Clostridiales Bacillaceae 24 Bacteria Proteobacteria Mollicutes RF39 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 236 Bacteria Proteobacteria Thermoplasmata E2 70 Bacteria Euryarchaeota Thermoplasmata E2 Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 15 Bacteria Euryarchaeota Thermoplasmata E2 36 Bacteria Proteobacteria Actinobacteria Actinomycetales Ruminococcaceae Microbacterium 8 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Fusobacteriaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 25 Bacteria Firmicutes Bacilli Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1170 18 Bacteria Proteobacteria Clostridia Clostridiales 23 Bacteria Firmicutes Clostridia Clostridiales 13 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 6 Bacteria Firmicutes Thermoplasmata E2 DHVEG 3 Bacteria Euryarchaeota Thermoplasmata E2 9 Bacteria Proteobacteria Deltaproteobacteria Clostridiales Verrucomicrobiaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 9 Bacteria Firmicutes Clostridia Clostridiales 56 Bacteria Firmicutes Clostridia Clostridiales 54 Bacteria Euryarchaeota Thermoplasmata E2 Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 18 Bacteria Firmicutes Bacilli Bacillales Bacillaceae 13 Bacteria Firmicutes Thermoplasmata E2 TMEG 412 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 215 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 4 Bacteria Proteobacteria Deltaproteobacteria Spirobacillales 25 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 26 Bacteria Firmicutes Thermoplasmata E2 55 Bacteria Proteobacteria Clostridia Clostridiales 189 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 1287 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Lactobacillus 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 795 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 13 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 16 Bacteria Proteobacteria Alphaproteobacteria Clostridiales 121 Bacteria Firmicutes Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 1628 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 10 Bacteria Firmicutes Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera 42 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 106 Bacteria Proteobacteria Clostridia Clostridiales 6 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 15 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 244 Bacteria Proteobacteria Deltaproteobacteria Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera 11 Bacteria Proteobacteria Alphaproteobacteria Fusobacteriales Leptotrichiaceae 7 Bacteria Euryarchaeota Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium 3 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 78 Bacteria Proteobacteria Thermoplasmata Clostridiales Ruminococcaceae 19 Bacteria Crenarchaeota Thaumarchaeota Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 59 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 125 Bacteria Euryarchaeota Thaumarchaeota E2 Cenarchaeaceae Candidatus_Nitrososphaera 72 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 6 Bacteria Firmicutes Clostridia Clostridiales Lactobacillaceae Lactobacillus 8 Bacteria Proteobacteria Thermoplasmata E2 vadinCA11 58 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 59 Bacteria Firmicutes Clostridia Clostridiales Planctomycetaceae Planctomyces 84 Bacteria Firmicutes Bacilli Clostridiales Aerococcaceae 3 Bacteria Proteobacteria Thermoplasmata E2 Nitrososphaeraceae Candidatus_Nitrososphaera 6 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 5 Bacteria Proteobacteria Deltaproteobacteria Rickettsiales mitochondria 17 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Desulfotomaculum 22 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 19 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 7 Bacteria Proteobacteria Deltaproteobacteria Clostridiales 140 Bacteria Euryarchaeota Thermoplasmata E2 166 Bacteria Firmicutes Clostridia Clostridiales Aerococcaceae 6 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 4 Bacteria Firmicutes Clostridia Clostridiales 113 Bacteria Euryarchaeota Thermoplasmata E2 Desulfobulbaceae 15 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae 24 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 13 Bacteria Cyanobacteria Chloroplast Clostridiales 5 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 313 Bacteria Euryarchaeota Thermoplasmata E2 180 Bacteria Proteobacteria Thermoplasmata E2 246 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 22 Bacteria Euryarchaeota Thermoplasmata E2 156 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 122 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 24 Bacteria Euryarchaeota Clostridia E2 84 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 80 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Clostridia Clostridiales 11 Bacteria Firmicutes Clostridia Clostridiales 16 Bacteria Euryarchaeota Thermoplasmata E2 4 Bacteria Proteobacteria Thermoplasmata Clostridiales Ruminococcaceae 426 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 414 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 336 Bacteria Euryarchaeota Clostridia Clostridiales 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 16 Bacteria Euryarchaeota Thermoplasmata E2 262 Bacteria Firmicutes Thermoplasmata E2 Xenococcaceae 6 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 31 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Proteobacteria Clostridia Clostridiales Lachnospiraceae 7 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 14 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 9 Bacteria Euryarchaeota Thermoplasmata E2 30 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 41 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Proteobacteria Deltaproteobacteria E2 31 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 60 Bacteria Euryarchaeota Thermoplasmata E2 14 Bacteria Proteobacteria Clostridia Clostridiales 9 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Planktothricoides 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Alphaproteobacteria E2 Marine_group_II 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 117 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 4 Bacteria Euryarchaeota Thermoplasmata E2 10 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 6 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 26 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 23 Bacteria Euryarchaeota Thermoplasmata E2 35 Bacteria Euryarchaeota Thermoplasmata E2 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 36 Bacteria Firmicutes Bacteroidia Bacteroidales Prevotellaceae Prevotella 219 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 9 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Aquificaceae Candidatus_Portiera 389 Bacteria Proteobacteria Clostridia Clostridiales Helicobacteraceae 6 Bacteria Firmicutes Clostridia Clostridiales 1587 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 189 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae 621 Bacteria Firmicutes Clostridia Clostridiales Bacillaceae Geobacillus 600 Bacteria Proteobacteria Alphaproteobacteria E2 mitochondria 6 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 30 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 3 Bacteria Firmicutes Bacilli Clostridiales Mycoplasmataceae Mycoplasma 79 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Euryarchaeota Thermoplasmata E2 Acholeplasmataceae Candidatus_Phytoplasma 38 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae 13 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 48 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Ruminococcaceae 36 Bacteria Firmicutes Thermoplasmata E2 16 Bacteria Firmicutes Clostridia Clostridiales Bacillaceae Lactobacillus 9 Bacteria Euryarchaeota Thermoplasmata E2 88 Bacteria Firmicutes Clostridia Clostridiales 112 Bacteria Firmicutes Clostridia E2 Ruminococcaceae 9 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Ruminococcaceae 13 Bacteria Firmicutes Thermoplasmata E2 DHVEG 46 Bacteria Cyanobacteria Chloroplast Chlorophyta Ulvophyceae 223 Bacteria Firmicutes Clostridia Clostridiales 503 Bacteria Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 43 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 30 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 3 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 36 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 26 Bacteria Euryarchaeota Thermoplasmata E2 12 Bacteria Euryarchaeota Clostridia Clostridiales Veillonellaceae 4 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 11 Bacteria Euryarchaeota Thermoplasmata E2 TMEG 31 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 30 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 25 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 12020 Bacteria Proteobacteria Thermoplasmata E2 4 Bacteria Euryarchaeota Thermoplasmata E2 46 Bacteria Proteobacteria Alphaproteobacteria E2 Lactobacillaceae Lactobacillus Lactobacillus_zeae 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 177 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 256 Bacteria Firmicutes Clostridia Clostridiales DHVEG 429 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 12 Bacteria Firmicutes Bacilli Lactobacillales Methanosarcinaceae Methanosarcina 11 Bacteria Euryarchaeota Clostridia Clostridiales 3 Bacteria Firmicutes Clostridia Clostridiales Mycoplasmataceae 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 27 Bacteria Firmicutes Thermoplasmata E2 103 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 71 Bacteria Euryarchaeota Thermoplasmata E2 117 Bacteria Proteobacteria Thermoplasmata E2 Anaeroplasmataceae Asteroleplasma 95 Bacteria Proteobacteria Thermoplasmata E2 Anaeroplasmataceae Asteroleplasma 442 Bacteria Proteobacteria Clostridia Clostridiales 13 Bacteria Proteobacteria Clostridia Clostridiales Marine_group_II 9 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 5 Bacteria Euryarchaeota Thermoplasmata E2 Aquificaceae 43 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 5 Bacteria Proteobacteria Thermoplasmata E2 20 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 76 Bacteria Firmicutes Thermoplasmata E2 Marine_group_II 101 Bacteria Proteobacteria Clostridia Clostridiales Methylophilaceae 20 Bacteria Proteobacteria Clostridia Clostridiales 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 35 Bacteria Proteobacteria Clostridia Clostridiales Veillonellaceae 89 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 13 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Actinomyces 120 Bacteria Proteobacteria Alphaproteobacteria Actinomycetales Sphingomonadaceae 54 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 22 Bacteria Proteobacteria Alphaproteobacteria Clostridiales 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 6 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 6 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Candidatus_Nitrososphaera 11 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Proteobacteria Clostridia Clostridiales Mycoplasmataceae Mycoplasma 5 Bacteria Proteobacteria Clostridia Clostridiales 21 Bacteria Euryarchaeota Thermoplasmata Clostridiales DHVEG 34 Bacteria Proteobacteria Clostridia Clostridiales Clostridiaceae Caloramator 3 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 8 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 65 Bacteria Proteobacteria Mollicutes Clostridiales 255 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Clostridia Clostridiales 20 Bacteria Proteobacteria Clostridia Clostridiales 14 Bacteria Firmicutes Clostridia Clostridiales DHVEG 11 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 11 Bacteria Cyanobacteria Clostridia Clostridiales 6 Bacteria Firmicutes Bacilli Clostridiales Ruminococcaceae 4 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 154 Bacteria Proteobacteria Thermoplasmata E2 4 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Marinobacter 133 Bacteria Euryarchaeota Thermoplasmata E2 6 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 16 Bacteria Proteobacteria Clostridia Clostridiales 3 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 50 Bacteria Firmicutes Clostridia Clostridiales Cenarchaeaceae Nitrosopumilus 7 Bacteria Proteobacteria Clostridia Clostridiales Lactobacillus 49 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Actinomyces 29 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 7 Bacteria Proteobacteria Chloroplast Clostridiales 69 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae 49 Bacteria Firmicutes Thermoplasmata E2 17 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Allobaculum 25 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 17 Bacteria Firmicutes Clostridia Clostridiales Bacillaceae 42 Bacteria Firmicutes Clostridia Clostridiales Verrucomicrobiaceae Akkermansia Akkermansia_muciniphila 13 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Ruminococcaceae 9 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 10 Bacteria Firmicutes Gammaproteobacteria Clostridiales Veillonellaceae 11203 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 3 Bacteria Proteobacteria Clostridia Clostridiales 416 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 94 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria Proteobacteria Clostridia Clostridiales 30 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Nitrosopumilus Nitrosopumilus_pIVWA5 6814 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria Euryarchaeota Thermoplasmata E2 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 8 Bacteria Proteobacteria Clostridia Clostridiales Marine_group_II 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 1142 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 79 Bacteria Proteobacteria Deltaproteobacteria E2 Ruminococcaceae 32 Bacteria Euryarchaeota Thermoplasmata E2 7 Bacteria Proteobacteria Clostridia Clostridiales Marine_group_II 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 22 Bacteria Proteobacteria Thermoplasmata E2 25 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria Euryarchaeota Thermoplasmata E2 15 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 8 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 4 Bacteria Firmicutes Clostridia Clostridiales 9 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 78 Bacteria Firmicutes Clostridia Clostridiales 9 Bacteria Firmicutes Clostridia Clostridiales Peptoniphilus 51 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 15 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 3 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 67 Bacteria Proteobacteria Alphaproteobacteria E2 DHVEG 31 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 7 Bacteria Firmicutes Clostridia Clostridiales Actinomycetaceae Actinomyces 121 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 43 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 36 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 34 Bacteria Firmicutes Clostridia Clostridiales Mycoplasmataceae Mycoplasma 27 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 270 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 1360 Bacteria Proteobacteria Gammaproteobacteria E2 175 Bacteria Firmicutes Bacilli Actinomycetales 8 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 10 Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae 29 Bacteria Proteobacteria Clostridia Clostridiales 5 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 15 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Leptolyngbya 19 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 329 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 22 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 22 Bacteria Euryarchaeota Thermoplasmata E2 4 Bacteria Proteobacteria Thermoplasmata E2 17 Bacteria Proteobacteria Clostridia Clostridiales Candidatus_Nitrososphaera 6 Bacteria Firmicutes Clostridia Clostridiales Sphingomonadaceae 18 Bacteria Firmicutes Clostridia Clostridiales Mycoplasmataceae Fusobacterium 13 Bacteria Proteobacteria Clostridia E2 Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 12 Bacteria Firmicutes Clostridia Clostridiales 3 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 28 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 10 Bacteria Firmicutes Clostridia Clostridiales 5 Bacteria Euryarchaeota Thermoplasmata E2 Asteroleplasma 75 Bacteria Euryarchaeota Thermoplasmata E2 27 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 4 Bacteria Firmicutes MBGB 8 Bacteria Proteobacteria 17 Bacteria Firmicutes Clostridia Clostridiales 6 Bacteria Proteobacteria Thermoplasmata E2 14 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 5 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 190 Bacteria Firmicutes Clostridia Clostridiales 38 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 21 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Pelagibacteraceae 17 Bacteria Proteobacteria Alphaproteobacteria E2 Sphingomonadaceae 12 Bacteria Firmicutes Thermoplasmata E2 mitochondria 4 Bacteria Proteobacteria Alphaproteobacteria Lactobacillales Ruminococcaceae 99 Bacteria Firmicutes Actinobacteria Actinomycetales Brevibacteriaceae Brevibacterium 58 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 137 Bacteria Firmicutes Thermoplasmata E2 13 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 578 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Euryarchaeota Thermoplasmata E2 6 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 172 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 4 Bacteria Euryarchaeota Thermoplasmata E2 10 Bacteria Euryarchaeota Clostridia Clostridiales vadinCA11 9 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 21 Bacteria Euryarchaeota Thermoplasmata E2 Streptosporangiaceae Nonomuraea 125 Bacteria Cyanobacteria Chloroplast Clostridiales Ruminococcaceae 12 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 14 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 301 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 274 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae Sneathia 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae PSB 66 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 4 Bacteria Firmicutes Clostridia Clostridiales 7 Bacteria Proteobacteria Thermoplasmata E2 Hyphomicrobiaceae 24 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 31 Bacteria Firmicutes Alphaproteobacteria Lactobacillales Aerococcaceae Alloiococcus 28 Bacteria Proteobacteria Clostridia Clostridiales 72 Bacteria Firmicutes Clostridia Clostridiales mitochondria 44 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 17 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Firmicutes Clostridia Clostridiales Faecalibacterium Faecalibacterium_prausnitzii 4 Bacteria Euryarchaeota Thermoplasmata E2 Mycoplasmataceae Methanomassiliicoccus 8 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Pelagibacteraceae 3 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 51 Bacteria Firmicutes Clostridia Clostridiales 8 Bacteria Proteobacteria Thermoplasmata E2 DHVEG 75 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 4 Bacteria Proteobacteria Gammaproteobacteria 116 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 13 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 26 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Euryarchaeota Thermoplasmata E2 Candidatus_Nitrososphaera 17 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 21 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus 4 Bacteria Proteobacteria Clostridia Clostridiales 8 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 54 Bacteria Firmicutes Clostridia Clostridiales 31 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 86 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 3 Bacteria Proteobacteria Thermoplasmata E2 12 Bacteria Euryarchaeota Thermoplasmata E2 19 Bacteria Euryarchaeota Thermoplasmata E2 3761 Bacteria Euryarchaeota Thermoplasmata E2 106 Bacteria Euryarchaeota Thermoplasmata E2 23 Bacteria Firmicutes Clostridia Clostridiales DHVEG 724 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 107 Bacteria Firmicutes Clostridia Clostridiales Mycoplasmataceae 84 Bacteria Proteobacteria Clostridia Clostridiales Peptostreptococcaceae 472 Bacteria Proteobacteria Clostridia Clostridiales 5 Bacteria Proteobacteria Thermoplasmata E2 Marine_group_II 19 Bacteria Firmicutes Clostridia Clostridiales Veillonellaceae 30 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 6 Bacteria Proteobacteria Alphaproteobacteria E2 DHVEG 7 Bacteria Proteobacteria Clostridia Clostridiales 51 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Actinomyces 5 Bacteria Firmicutes Clostridia Clostridiales Mycoplasmataceae 186 Bacteria Proteobacteria Thermoplasmata E2 vadinCA11 22 Bacteria Firmicutes Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 3 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 32 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 16 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 6 Bacteria Proteobacteria Clostridia Clostridiales 6 Bacteria Firmicutes Thermoplasmata E2 14 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Lachnospiraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 95 Bacteria Firmicutes Clostridia Clostridiales Paenibacillaceae Paenibacillus 85 Bacteria Firmicutes Clostridia Clostridiales 19 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 7 Bacteria Proteobacteria Clostridia Clostridiales 31 Bacteria Firmicutes Clostridia Clostridiales Leptotrichiaceae Sneathia 3 Bacteria Firmicutes Clostridia Clostridiales Anaerococcus 5 Bacteria Proteobacteria Clostridia Clostridiales 42 Bacteria Firmicutes Clostridia Clostridiales mitochondria 70 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Bacillus Faecalibacterium_prausnitzii 9 Bacteria Firmicutes Thermoplasmata E2 4 Bacteria Proteobacteria Thermoplasmata E2 Mycoplasmataceae 98 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 13 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 14 Bacteria Proteobacteria Thermoplasmata E2 12 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Thermoplasmata E2 vadinCA11 35 Bacteria Proteobacteria Alphaproteobacteria Rhizobiales 169 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 2172 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 108 Bacteria Firmicutes Clostridia Clostridiales Actinomycetaceae 1578 Bacteria Firmicutes Clostridia Clostridiales 10 Bacteria Firmicutes Clostridia E2 396 Bacteria Firmicutes Clostridia Clostridiales DHVEG 233 Bacteria Firmicutes Clostridia E2 DHVEG 6 Bacteria Firmicutes Clostridia Clostridiales Anaeroplasmataceae Asteroleplasma 329 Bacteria Firmicutes Clostridia Clostridiales Marine_group_II 42 Bacteria Proteobacteria Clostridia Clostridiales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 46 Bacteria Proteobacteria Clostridia Clostridiales 100 Bacteria Firmicutes Thermoplasmata E2 Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 4 Bacteria Firmicutes Clostridia Clostridiales 10 Bacteria Euryarchaeota Thermoplasmata E2 Ruminococcaceae 3 Bacteria Firmicutes Clostridia Clostridiales Mycoplasmataceae Mycoplasma 24 Bacteria Euryarchaeota Thermoplasmata E2 Gemmataceae 19 Bacteria Proteobacteria Thermoplasmata E2 vadinCA11 15 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 125 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 20 Bacteria Euryarchaeota Thermoplasmata E2 7 Bacteria Crenarchaeota Clostridia Clostridiales Ruminococcaceae 5 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 3 Bacteria Firmicutes Clostridia Clostridiales vadinCA11 27 Bacteria Firmicutes Clostridia Clostridiales 9 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 78 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 1096 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 11 Bacteria Proteobacteria Thermoplasmata Clostridiales 4 Bacteria Proteobacteria Thermoplasmata E2 4 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 3 Bacteria Proteobacteria Chloroplast Flavobacteriales Flavobacteriaceae 60 Bacteria Proteobacteria Thermoplasmata E2 58 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 25 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 9 Bacteria Firmicutes Thermoplasmata E2 25 Bacteria Proteobacteria Thermoplasmata E2 4 Bacteria Firmicutes Thermoplasmata E2 Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 18 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 11 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 65 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 16 Bacteria Proteobacteria Clostridia Clostridiales 6 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 30 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 31 Bacteria Firmicutes Clostridia Clostridiales 70 Bacteria Firmicutes Clostridia Clostridiales 9 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 38 Bacteria Euryarchaeota Thermoplasmata E2 10 Bacteria Euryarchaeota Thermoplasmata E2 vadinCA11 72 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 30 Bacteria Proteobacteria Clostridia Clostridiales Marine_group_II 8 Bacteria Proteobacteria Thermoplasmata E2 Ruminococcaceae 14 Bacteria Proteobacteria Clostridia Clostridiales DHVEG 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Faecalibacterium Faecalibacterium_prausnitzii 16 Bacteria Firmicutes Thermoplasmata E2 Clostridiaceae 59 Bacteria Proteobacteria Thermoplasmata E2 11 Bacteria Planctomycetes Planctomycetia Clostridiales Isosphaeraceae 7 Bacteria Proteobacteria Deltaproteobacteria Clostridiales Puniceicoccaceae MB11C04 3 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 9 Bacteria Euryarchaeota Thermoplasmata E2 3 Bacteria Proteobacteria Gemm 32 Bacteria Firmicutes Clostridia Clostridiales vadinCA11 141 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 14 Bacteria Verrucomicrobia Spirochaetes Spirochaetales Spirochaetaceae Treponema 12 Bacteria Euryarchaeota Planctomycetia Gemmatales Prevotellaceae Prevotella 3 Bacteria Proteobacteria Gammaproteobacteria RB41 32 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 5 Bacteria Proteobacteria Clostridia Clostridiales 3 Bacteria Euryarchaeota Thermoplasmata E2 Marine_group_II 61 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 25 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 3 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 13 Bacteria Bacteroidetes Bacteroidia Bacteroidales KSA1 11 Bacteria Crenarchaeota Bacteroidia Bacteroidales Thermoproteaceae Pyrobaculum 3 Bacteria Euryarchaeota Thermoplasmata E2 DHVEG 15 Bacteria Actinobacteria Actinobacteria Actinomycetales Spirochaetaceae Treponema 4 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 12 Bacteria Proteobacteria Alphaproteobacteria Nitrospirales Leptospirillum 5 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus 10 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Anoxybacillus Anoxybacillus_kestanbolensis 31 Bacteria Firmicutes Actinobacteria Actinomycetales Streptomycetaceae Streptomyces 3 Bacteria Proteobacteria Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma 8 Bacteria Bacteroidetes Bacteroidia Bacteroidales Spirochaetaceae Treponema 8 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 6 Bacteria Proteobacteria Betaproteobacteria Xanthomonadales Xanthomonadaceae 3 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria