12 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 10 Bacteria Proteobacteria Bacteroidia Bacteroidales 11 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 6 Bacteria Proteobacteria Gammaproteobacteria Rickettsiales Moraxellaceae 4 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 7 Bacteria Proteobacteria Gammaproteobacteria Bacillales Prevotellaceae Prevotella 10 Bacteria Bacteroidetes Bacteroidia Bacteroidales Mycoplasmataceae 21 Bacteria Firmicutes Clostridia Clostridiales Pelagibacteraceae 15 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 6 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae Corynebacterium 242 Bacteria Proteobacteria Alphaproteobacteria Campylobacterales Campylobacteraceae Prevotella 10 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 6 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 10 Bacteria Proteobacteria Clostridia Clostridiales Lachnospiraceae 23 Bacteria Firmicutes Clostridia Clostridiales Anaerococcus 9 Bacteria Proteobacteria Actinobacteria Actinomycetales Prevotellaceae Prevotella 191 Bacteria Firmicutes Clostridia Clostridiales mitochondria 32 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 8 Bacteria Proteobacteria Clostridia Clostridiales Prevotellaceae Prevotella 7 Bacteria Proteobacteria Alphaproteobacteria Actinomycetales 5 Bacteria Proteobacteria Clostridia Clostridiales mitochondria 9 Bacteria Proteobacteria Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium 6 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 22 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Lactobacillaceae Lactobacillus 6029 Bacteria Proteobacteria Gammaproteobacteria Clostridiales mitochondria 9 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 25 Bacteria Proteobacteria Gammaproteobacteria Clostridiales mitochondria 4 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Prevotellaceae Prevotella 6 Bacteria Proteobacteria Anaerolineae Bacillales Veillonellaceae 10 Bacteria Proteobacteria Alphaproteobacteria Bacteroidales mitochondria 29 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Piscirickettsiaceae 12 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 6 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 13 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales mitochondria 9 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 10 Bacteria Proteobacteria Clostridia Clostridiales 16 Bacteria Proteobacteria Clostridia Bacteroidales Flavobacteriaceae 200 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Pirellulaceae 11 Bacteria Proteobacteria Clostridia Clostridiales Lachnospiraceae Prevotella 27 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 31 Bacteria Firmicutes Clostridia Clostridiales 80 Bacteria Firmicutes Clostridia Clostridiales Prevotellaceae Prevotella 126 Bacteria Proteobacteria Clostridia Clostridiales Parabacteroides 8 Bacteria Proteobacteria Clostridia Clostridiales mitochondria 33 Bacteria Firmicutes Bacteroidia Bacteroidales Phormidiaceae Porphyromonas 17 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 68 Bacteria Proteobacteria Clostridia Clostridiales Brocadiaceae Candidatus_Scalindua 10 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 31 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Prevotellaceae Prevotella 982 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 38 Bacteria Firmicutes Clostridia Clostridiales Bacillaceae Corynebacterium 16 Bacteria Proteobacteria Clostridia Clostridiales mitochondria 50 Bacteria Proteobacteria Clostridia Clostridiales 32 Bacteria Proteobacteria Betaproteobacteria Clostridiales Lachnospiraceae 47 Bacteria Firmicutes Clostridia Clostridiales Peptoniphilus 16 Bacteria Firmicutes Clostridia Clostridiales 6806 Bacteria Acidobacteria Acidobacteria iii1 12 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Pseudomonadaceae Leptotrichia 10 Bacteria Proteobacteria Gammaproteobacteria Rickettsiales Halomonadaceae 12 Bacteria Firmicutes Clostridia Clostridiales Verrucomicrobiaceae Prevotella 44 Bacteria Firmicutes Clostridia Clostridiales 7 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 20 Bacteria Actinobacteria Actinobacteria Actinomycetales Prevotellaceae Prevotella 13075 Bacteria Firmicutes Gammaproteobacteria Bacteroidales Erysipelotrichaceae Pedobacter 19 Bacteria Bacteroidetes Spirochaetes Spirochaetales Spirochaetaceae 16 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 36 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Ruminococcaceae 3 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 6 Bacteria Bacteroidetes Bacteroidia Bacteroidales Spirochaetaceae 18 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Moraxellaceae Acinetobacter 30 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Flavobacteriaceae Acinetobacter 18 Bacteria Firmicutes Bacilli Bacillales Planococcaceae Rummeliibacillus 51 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 12 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Pirellulaceae 96 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 119 Bacteria Proteobacteria Gammaproteobacteria Flavobacteriales Ruminococcaceae 16 Bacteria Proteobacteria Clostridia Clostridiales 38 Bacteria Firmicutes Clostridia Clostridiales Fusobacteriaceae 59 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Prevotellaceae Prevotella 92 Bacteria Firmicutes Gammaproteobacteria Bacteroidales Halobacteriaceae 22 Bacteria Proteobacteria Clostridia Clostridiales Spirochaetaceae Treponema 54 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Moraxellaceae 166 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 25 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Prevotellaceae Prevotella 41 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Enterobacteriaceae 532 Bacteria Crenarchaeota Bacteroidia Bacteroidales Thermoproteaceae Pyrobaculum 10 Bacteria Proteobacteria Planctomycetia Gemmatales Isosphaeraceae 6 Bacteria Firmicutes Alphaproteobacteria Clostridiales mitochondria 8 Bacteria Actinobacteria Actinobacteria Actinomycetales Prevotellaceae Prevotella 53 Bacteria Proteobacteria Clostridia Clostridiales 3145 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Lachnospiraceae Candidatus_Portiera 27 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 74 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Spirochaetaceae 260 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter 7 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 89 Bacteria Firmicutes Bacteroidia Bacteroidales Prevotellaceae Prevotella 29 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Leptotrichia 12 Bacteria Proteobacteria Clostridia Clostridiales Chitinophagaceae 165 Bacteria Firmicutes Clostridia Clostridiales Prevotellaceae Prevotella 25 Bacteria Firmicutes Clostridia Clostridiales 23 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 243 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 12 Bacteria Proteobacteria Chloroplast Rickettsiales mitochondria 72 Bacteria Proteobacteria Bacteroidia Bacteroidales mitochondria 6 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 645 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Ruminococcaceae 4 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales OM60 54 Bacteria Proteobacteria Bacteroidia Bacteroidales S24 78 Bacteria Proteobacteria Clostridia Clostridiales Prevotellaceae Prevotella 12 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Deinococcaceae 8 Bacteria Firmicutes Bacteroidia Bacteroidales Planctomycetaceae Planctomyces 299 Bacteria Proteobacteria Flavobacteriia Flavobacteriales Prevotellaceae Prevotella 842 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Halomonadaceae 98 Bacteria Firmicutes Gammaproteobacteria Bacteroidales Spirochaetaceae 36 Bacteria Bacteroidetes Bacteroidia Bacteroidales Ruminococcaceae 128 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales 7 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Fusobacteriaceae Fusobacterium 21 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 461 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Spirochaetaceae Corynebacterium 31 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Verrucomicrobiaceae Leptotrichia 43 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales 7 Bacteria Bacteroidetes Clostridia Bacteroidales Prevotellaceae Prevotella 187 Bacteria Firmicutes Clostridia Clostridiales Prevotellaceae Prevotella 8 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 38 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales Thermoproteaceae Pyrobaculum 33 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 33 Bacteria Proteobacteria Alphaproteobacteria Clostridiales mitochondria 91 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 6 Bacteria Bacteroidetes Clostridia Clostridiales Lachnospiraceae 78 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Moraxellaceae Acinetobacter 22 Bacteria Firmicutes Clostridia Clostridiales Neisseriaceae Bacteroides 5 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 260 Bacteria Bacteroidetes Bacteroidia Bacteroidales Coriobacteriaceae Collinsella 13 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 12017 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 7 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Prevotellaceae Prevotella 1209 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae Prevotella 27 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Ruminococcaceae 37 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Comamonadaceae Prevotella Legionella_pneumophila 50 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 7 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Aquificaceae 1021 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Flavobacteriaceae 659 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales S24 62 Bacteria Proteobacteria Clostridia Clostridiales Prevotellaceae Prevotella 151 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Moraxellaceae Prevotella 25 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Ruminococcaceae 9 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 134 Bacteria Proteobacteria Clostridia Clostridiales Cenarchaeaceae Nitrosopumilus 61 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 32 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Ruminococcaceae Ruminococcus 46 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 14 Bacteria Proteobacteria Betaproteobacteria Burkholderiales mitochondria 1483 Bacteria Chloroflexi Bacteroidia Bacteroidales Spirochaetaceae Treponema 159 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Pseudomonadaceae 19 Bacteria Proteobacteria Bacteroidia Bacteroidales 48 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 12 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Pseudomonadaceae Pseudomonas 115 Bacteria Firmicutes Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia 56 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Chitinophagaceae Mucispirillum Mucispirillum_schaedleri 23 Bacteria Proteobacteria Actinobacteria Actinomycetales Corynebacteriaceae Corynebacterium 9 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 257 Bacteria Proteobacteria Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 27 Bacteria Proteobacteria Gammaproteobacteria Clostridiales mitochondria 196 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 28 Bacteria Proteobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces 26 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 66 Bacteria Proteobacteria Thermoplasmata E2 vadinCA11 8 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Gaiellaceae 14 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales A714017 ZA3312c 44 Bacteria Proteobacteria Bacteroidia Bacteroidales S24 18 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 43 Bacteria Bacteroidetes Bacteroidia Bacteroidales Mycoplasmataceae Mycoplasma 66 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Ruminococcaceae Ruminococcus 50 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Comamonadaceae Leptotrichia 29 Bacteria Proteobacteria Thermoplasmata E2 Moraxellaceae 48 Bacteria Proteobacteria Bacteroidia Bacteroidales Porphyromonadaceae Treponema 21 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Spirochaetaceae 70 Bacteria Proteobacteria Clostridia Clostridiales 99 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Porphyromonadaceae 25 Bacteria Proteobacteria Clostridia Clostridiales OM60 236 Bacteria Bacteroidetes Gammaproteobacteria Gaiellales Gaiellaceae 40 Bacteria Proteobacteria Gammaproteobacteria Rickettsiales mitochondria 13 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Moraxellaceae Acinetobacter 32 Bacteria Proteobacteria Opitutae Bacteroidales 4 Bacteria Proteobacteria Bacteroidia Bacteroidales S24 61 Bacteria Proteobacteria Bacteroidia Bacteroidales Spirochaetaceae Treponema 12 Bacteria Bacteroidetes Bacteroidia Bacteroidales S24 61 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Pasteurellaceae Prevotella 203 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Spirochaetaceae Treponema 855 Bacteria Proteobacteria Bacteroidia Bacteroidales Spirochaetaceae Treponema 29 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae 73 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Burkholderiaceae Burkholderia 115 Bacteria Firmicutes Clostridia Clostridiales Spirochaetaceae Treponema 14 Bacteria Crenarchaeota Clostridia Clostridiales 119 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Moraxellaceae Acinetobacter 11 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Moraxellaceae Acinetobacter 136 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Comamonadaceae 91 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Desulfobacteraceae 113 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Acinetobacter 149 Bacteria Proteobacteria Gammaproteobacteria Bacillales Coriobacteriaceae 31 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales mitochondria 27 Bacteria Bacteroidetes Bacteroidia Bacteroidales SHA 1084 Bacteria Euryarchaeota Spirochaetes Spirochaetales Spirochaetaceae Treponema 5 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Prevotellaceae Prevotella 17 Bacteria Proteobacteria Thermoplasmata E2 Treponema 219 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales 296 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 16 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 40 Bacteria Proteobacteria Spirochaetes Spirochaetales Spirochaetaceae Treponema 14 Bacteria Bacteroidetes Actinobacteria Bacteroidales Isosphaeraceae 148 Bacteria Proteobacteria Spirochaetes Spirochaetales Spirochaetaceae Treponema 125 Bacteria Bacteroidetes Bacilli Bacteroidales Nocardiopsaceae 170 Bacteria Bacteroidetes Bacteroidia Bacteroidales 25 Bacteria Firmicutes Clostridia Clostridiales mitochondria 21 Bacteria Proteobacteria Clostridia Clostridiales Lachnospiraceae 207 Bacteria Proteobacteria Bacteroidia Bacteroidales Thermotogaceae Desulfovibrio 98 Bacteria Proteobacteria Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 12 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 722 Bacteria Bacteroidetes Bacteroidia Bacteroidales Ruminococcaceae 37 Bacteria Proteobacteria Clostridia Clostridiales Thermogemmatisporaceae 64 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 490 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 15 Bacteria Proteobacteria Clostridia Clostridiales Staphylococcaceae Staphylococcus Staphylococcus_aureus 287 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae 57 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae 33 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales 54 Bacteria Proteobacteria Gammaproteobacteria Alteromonadales 92 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Saprospiraceae 79 Bacteria Proteobacteria Gammaproteobacteria Spirochaetales Spirochaetaceae Treponema 250 Bacteria Proteobacteria Phycisphaerae Bacteroidales 263 Bacteria Proteobacteria Gammaproteobacteria Clostridiales 52 Bacteria Firmicutes Bacilli Lactobacillales Koribacteraceae 677 Bacteria Bacteroidetes Clostridia Bacteroidales Lachnospiraceae Leptotrichia 47 Bacteria Bacteroidetes Bacteroidia Bacteroidales 67 Bacteria Proteobacteria Alphaproteobacteria Clostridiales Acholeplasmataceae Candidatus_Phytoplasma 222 Bacteria Proteobacteria Gammaproteobacteria Bacteroidales Ruminococcaceae Streptococcus 25 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Oscillospira 519 Bacteria Proteobacteria Gammaproteobacteria Rickettsiales Bacteroidaceae 95 Bacteria Proteobacteria Bacteroidia Bacteroidales Prevotellaceae Prevotella 80 Bacteria Firmicutes Clostridia Clostridiales Spirochaetaceae Treponema 42 Bacteria Proteobacteria Bacteroidia Bacteroidales 251 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae 62 Bacteria Proteobacteria Clostridia Clostridiales Desulfobacteraceae 9 Bacteria Planctomycetes Planctomycetia Bacteroidales Prevotellaceae Prevotella 96 Bacteria Bacteroidetes Bacteroidia Bacteroidales 84 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Lachnospiraceae 127 Bacteria Firmicutes Clostridia Clostridiales Prevotellaceae Prevotella 447 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 24 Bacteria Proteobacteria Clostridia Clostridiales Acholeplasmataceae Candidatus_Phytoplasma 10 Bacteria Bacteroidetes Bacteroidia Bacteroidales mitochondria 1022 Bacteria Firmicutes Clostridia Clostridiales 738 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae 13 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 49 Bacteria Proteobacteria Gammaproteobacteria Clostridiales Alteromonadaceae