5826 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae 23 Archaea YLA114 38 Bacteria Proteobacteria Gammaproteobacteria Cenarchaeales Cenarchaeaceae Nitrosopumilus Nitrosopumilus_pIVWA5 52 Bacteria Firmicutes Clostridia Clostridiales Cenarchaeaceae 3032 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 8 Archaea Euryarchaeota DSEG 104A5 81 Archaea YLA114 13364 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 36 Bacteria Euryarchaeota Clostridia Clostridiales Ruminococcaceae Nitrosopumilus Nitrosopumilus_pIVWA5 18 Archaea WCHD3 70 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 494 Archaea Euryarchaeota YLA114 32 Archaea WCHD3 238 Archaea Euryarchaeota YLA114 1549 Archaea Crenarchaeota MCG B10 13 Archaea YLA114 24 Bacteria Proteobacteria Alphaproteobacteria Rickettsiales mitochondria 47 Archaea WCHD3 4 Archaea WCHD3 34 Archaea WCHD3 24 Archaea WCHD3 36 Archaea WCHD3 3 Archaea WCHD3 12 Archaea WCHD3 26 Archaea WCHD3 22 Archaea WCHD3 12 Archaea YLA114 15 Archaea WCHD3 92 Archaea WCHD3 33 Archaea WCHD3 38 Archaea WCHD3 4 Archaea WCHD3 9 Archaea WCHD3 11 Archaea WCHD3 6 Archaea WCHD3 9 Archaea YLA114 25 Archaea WCHD3 39 Archaea WCHD3 57 Archaea WCHD3 7 Archaea WCHD3 21 Archaea WCHD3 19 Archaea YLA114 48 Archaea YLA114 17 Archaea Euryarchaeota YLA114 165 Archaea YLA114 54 Archaea YLA114 19 Archaea YLA114 38 Archaea YLA114 61 Archaea YLA114 26 Archaea YLA114 66 Archaea YLA114 33 Archaea YLA114 75 Archaea YLA114 36 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Natronomonas 26 Archaea YLA114 583 Archaea Euryarchaeota YLA114 67 Archaea YLA114 11 Archaea YLA114 12 Archaea YLA114 5 Archaea YLA114 32 Archaea YLA114 111 Archaea YLA114 9 Archaea YLA114 258 Archaea YLA114 37 Archaea WCHD3 34 Archaea YLA114 162 Archaea YLA114 29 Archaea YLA114 12 Archaea WCHD3 18 Archaea YLA114 36 Archaea YLA114 42 Archaea Crenarchaeota MHVG 11 Archaea YLA114 324 Archaea Euryarchaeota YLA114 28 Archaea YLA114 9 Archaea YLA114 9 Archaea YLA114 79 Archaea YLA114 47 Archaea YLA114 31 Archaea YLA114 30 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae 42 Archaea YLA114 30 Archaea YLA114 73 Archaea YLA114 7 Archaea YLA114 21 Archaea 44 Archaea YLA114 6 Archaea YLA114 39 Archaea YLA114 82 Bacteria Planctomycetes Brocadiales Brocadiaceae Candidatus_Scalindua 60 Archaea YLA114 28 Archaea YLA114 27 Archaea YLA114 35 Archaea YLA114 157 Archaea YLA114 72 Archaea YLA114 52 Archaea YLA114 29 Archaea YLA114 8 Bacteria Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobacteraceae 8 Archaea YLA114 143 Archaea YLA114 39 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae ArcF12 6 Archaea WCHD3 65 Archaea YLA114 7 Archaea YLA114 17 Archaea YLA114 8 Archaea YLA114 19 Archaea YLA114 5 Archaea YLA114 4 Archaea Euryarchaeota DSEG YLA114 81 Archaea YLA114 74 Archaea YLA114 50 Archaea YLA114 5 Archaea YLA114 10 Archaea YLA114 15 Archaea YLA114 25 Archaea YLA114 14 Archaea YLA114 6 Archaea YLA114 71 Archaea YLA114 26 Archaea YLA114 12 Archaea YLA114 21 Archaea YLA114 26 Archaea YLA114 35 Archaea YLA114 7 Archaea YLA114 32 Archaea YLA114 20 Archaea WCHD3 139 Archaea YLA114 13 Archaea YLA114 8 Archaea YLA114 22 Archaea Euryarchaeota Methanomicrobia YLA114 15 Archaea YLA114 11 Archaea YLA114 107 Archaea YLA114 58 Archaea YLA114 53 Archaea YLA114 10 Archaea WCHD3 18 Archaea YLA114 23 Archaea YLA114 133 Archaea YLA114 32 Archaea YLA114 32 Archaea YLA114 13 Archaea YLA114 85 Archaea YLA114 85 Archaea YLA114 19 Archaea YLA114 33 Archaea YLA114 14 Archaea YLA114 46 Archaea YLA114 17 Archaea YLA114 42 Archaea YLA114 7 Archaea YLA114 114 Archaea YLA114 24 Archaea YLA114 160 Archaea Euryarchaeota YLA114 13 Archaea Euryarchaeota DSEG HydGC 9 Archaea YLA114 31 Archaea Euryarchaeota YLA114 33 Archaea YLA114 7 Archaea YLA114 60 Archaea Euryarchaeota YLA114 42 Archaea YLA114 28 Archaea YLA114 39 Archaea YLA114 15 Archaea YLA114 19 Archaea YLA114 18 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae 41 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae 7 Archaea YLA114 115 Archaea YLA114 13 Archaea YLA114 24 Archaea YLA114 34 Archaea YLA114 10 Archaea YLA114 7 Archaea YLA114 32 Archaea YLA114 50 Archaea Euryarchaeota YLA114 69 Archaea YLA114 13 Archaea YLA114 13 Archaea YLA114 47 Archaea YLA114 8 Bacteria Planctomycetes Brocadiales Brocadiaceae 35 Archaea WCHD3 18 Archaea YLA114 27 Archaea YLA114 31 Archaea YLA114 97 Archaea YLA114 19 Archaea YLA114 57 Archaea YLA114 32 Archaea YLA114 16 Archaea YLA114 42 Archaea YLA114 16 Archaea WCHD3 18 Archaea YLA114 7 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Halobaculum 14 Archaea WCHD3 11 Archaea YLA114 7 Archaea YLA114 13 Archaea YLA114 10 Archaea YLA114 12 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Halogeometricum 14 Archaea YLA114 137 Archaea YLA114 20 Archaea YLA114 25 Archaea YLA114 24 Archaea YLA114 32 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Haloferax 10 Archaea Euryarchaeota YLA114 5 Archaea YLA114 44 Archaea YLA114 3 Archaea YLA114 5 Archaea 17 Archaea YLA114 90 Archaea 36 Archaea YLA114 5 Bacteria OP3 PBS 36 Archaea YLA114 9 Archaea YLA114 29 Archaea YLA114 9 Archaea YLA114 304 Archaea YLA114 19 Archaea YLA114 10 Archaea Euryarchaeota Methanomicrobia E2 Archaeoglobaceae 25 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Natronomonas 19 Archaea YLA114 20 Archaea YLA114 5 Archaea WCHD3 12 Archaea WCHD3 22 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae 10 Archaea YLA114 20 Archaea YLA114 9 Archaea YLA114 40 Archaea YLA114 3 Archaea YLA114 15 Archaea YLA114 74 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Natronomonas 29 Archaea YLA114 16 Archaea YLA114 36 Archaea YLA114 22 Archaea 31 Archaea YLA114 26 Archaea YLA114 11 Archaea YLA114 32 Archaea YLA114 35 Archaea YLA114 8 Archaea YLA114 10 Archaea YLA114 44 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Halobacterium 26 Archaea Euryarchaeota YLA114 16 Archaea WCHD3 5 Archaea 21 Bacteria Firmicutes Clostridia Clostridiales 90 Archaea YLA114 11 Archaea YLA114 19 Archaea YLA114 79 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae 17 Archaea YLA114 31 Archaea YLA114 34 Archaea YLA114 7 Archaea YLA114 14 Archaea YLA114 10 Archaea WCHD3 11 Archaea YLA114 20 Archaea YLA114 8 Archaea YLA114 67 Archaea YLA114 29 Archaea YLA114 42 Archaea YLA114 9 Archaea YLA114 41 Archaea Euryarchaeota YLA114 30 Archaea YLA114 6 Archaea YLA114 25 Archaea Euryarchaeota YLA114 9 Archaea YLA114 55 Archaea YLA114 8 Archaea YLA114 9 Archaea YLA114 8 Archaea YLA114 27 Archaea YLA114 47 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae ArcF12 13 Archaea YLA114 10 Archaea YLA114 8 Archaea YLA114 23 Archaea YLA114 13 Archaea YLA114 33 Archaea Euryarchaeota Methanobacteria Methanobacteriales 19 Archaea YLA114 5 Archaea YLA114 37 Archaea Euryarchaeota Methanomicrobia Methanosarcinales 15 Archaea YLA114 23 Archaea WCHD3 19 Archaea YLA114 27 Archaea YLA114 8 Archaea YLA114 38 Archaea YLA114 38 Archaea YLA114 19 Archaea YLA114 77 Archaea Euryarchaeota Methanomicrobia Methanomicrobiales 12 Archaea YLA114 6 Archaea YLA114 18 Archaea YLA114 31 Archaea YLA114 18 Archaea YLA114 23 Archaea WCHD3 12 Archaea YLA114 10 Archaea Euryarchaeota YLA114 23 Archaea YLA114 15 Archaea WCHD3 17 Archaea YLA114 10 Archaea WCHD3 6 Archaea YLA114 15 Archaea YLA114 7 Archaea YLA114 14 Archaea WCHD3 8 Archaea YLA114 15 Archaea YLA114 6 Archaea YLA114 20 Archaea YLA114 13 Archaea YLA114 20 Archaea YLA114 15 Archaea YLA114 21 Archaea WCHD3 20 Archaea Euryarchaeota YLA114 5 Archaea YLA114 13 Archaea YLA114 6 Archaea YLA114 9 Archaea YLA114 25 Archaea YLA114 12 Archaea YLA114 72 Archaea YLA114 61 Archaea YLA114 152 Archaea YLA114 9 Archaea YLA114 41 Archaea YLA114 20 Archaea YLA114 23 Archaea Euryarchaeota YLA114 34 Archaea YLA114 143 Archaea YLA114 6 Archaea YLA114 147 Archaea YLA114 10 Archaea YLA114 22 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae 11 Archaea WCHD3 33 Archaea YLA114 8 Archaea YLA114 10 Archaea YLA114 16 Archaea YLA114 191 Archaea YLA114 20 Archaea YLA114 16 Archaea YLA114 14 Archaea Euryarchaeota YLA114 17 Archaea YLA114 19 Archaea YLA114 4 Archaea WCHD3 11 Archaea Euryarchaeota YLA114 48 Archaea YLA114 4 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Haloarcula 10 Archaea YLA114 30 Archaea YLA114 20 Archaea WCHD3 14 Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Halogeometricum 7 Archaea YLA114 3 Archaea Euryarchaeota YLA114 28 Archaea YLA114 48 Archaea WCHD3 11 Archaea YLA114 40 Archaea YLA114 6 Archaea YLA114 40 Archaea YLA114 292 Archaea Crenarchaeota MCG B10 249 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1170 31 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales SAGMA 233 Archaea Crenarchaeota MCG pGrfC26 353 Archaea Crenarchaeota MCG B10 64 Bacteria OP3 PBS 966 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera 683 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera 37 Bacteria Proteobacteria Deltaproteobacteria Myxococcales 2244 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 38 Bacteria Nitrospirae Nitrospira Nitrospirales BD2 140 Bacteria Proteobacteria Gammaproteobacteria Chromatiales 134 Bacteria Proteobacteria Gammaproteobacteria Chromatiales 5 Archaea YLA114 95 Bacteria Proteobacteria Gammaproteobacteria Chromatiales 102 Bacteria Proteobacteria Gammaproteobacteria Chromatiales 198 Archaea Crenarchaeota MBGB 54 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 175 Bacteria Proteobacteria Gammaproteobacteria Chromatiales 10 Archaea Crenarchaeota MBGA NRP 64 Bacteria Acidobacteria Acidobacteria CCU21 48 Archaea YLA114 64 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae 35 Archaea Crenarchaeota MCG 165 Bacteria Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophobacteraceae 41 Bacteria Chloroflexi Anaerolineae envOPS12 87 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae 21 Archaea WCHD3 353 Bacteria Chloroflexi Anaerolineae S0208 43 Archaea Crenarchaeota MCG pGrfC26 11 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae 9 Bacteria Proteobacteria Deltaproteobacteria GMD14H09 107 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 28 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 108 Archaea Crenarchaeota MBGA 36 Bacteria Verrucomicrobia DA101 15 Bacteria Planctomycetes Phycisphaerae Phycisphaerales Phycisphaeraceae 18 Bacteria Verrucomicrobia 39 Bacteria Verrucomicrobia Verruco R76 22 Bacteria Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae Thiomicrospira 19 Bacteria Proteobacteria Deltaproteobacteria Syntrophobacterales Syntrophobacteraceae 78 Archaea Crenarchaeota MCG 8 Bacteria OP3 PBS 425 Bacteria Chloroflexi Anaerolineae S0208 8 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter Acinetobacter_rhizosphaerae 285 Bacteria Chloroflexi Anaerolineae S0208 10 Bacteria Planctomycetes OM190 CL500 32 Archaea WCHD3 15 Bacteria Verrucomicrobia DA101 7 Bacteria OP3 PBS 8 Bacteria Bacteroidetes KSA1 13 Archaea WCHD3 6 Bacteria Proteobacteria Gammaproteobacteria Legionellales Coxiellaceae 42 Bacteria Acidobacteria iii1 DS 32 Archaea WCHD3 46 Bacteria Acidobacteria Acidobacteria CCU21 224 Bacteria Chloroflexi Anaerolineae S0208 227 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1145 4 Archaea Euryarchaeota Thermoplasmata E2 DHVEG 26 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera 18 Bacteria Verrucomicrobia 11 Archaea WCHD3 112 Bacteria Proteobacteria Gammaproteobacteria Thiotrichales Piscirickettsiaceae Thiomicrospira 13 Archaea Crenarchaeota MCG 37 Archaea YLA114 18 Bacteria Acidobacteria iii1 DS 10 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera Candidatus_Nitrososphaera_SCA1170 12 Archaea Crenarchaeota MCG 95 Archaea Crenarchaeota MCG 55 Archaea Crenarchaeota Thaumarchaeota Nitrososphaerales Nitrososphaeraceae Candidatus_Nitrososphaera 22 Archaea YLA114 6 Archaea WCHD3 36 Bacteria Verrucomicrobia Verruco R76 12 Bacteria PAUC34f 9 Archaea Crenarchaeota MCG pGrfC26 14 Bacteria Planctomycetes OM190 CL500 20 Bacteria Verrucomicrobia 14 Bacteria Verrucomicrobia 13 Bacteria Proteobacteria Gammaproteobacteria Chromatiales 610 Bacteria Bacteroidetes Bacteroidia Bacteroidales Methanobacteriaceae Hymenobacter 8 Bacteria OP3 PBS 7 Bacteria Planctomycetes C6 MVS 9 Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae 20 Bacteria Acidobacteria Acidobacteria iii1 28 Bacteria Proteobacteria Clostridia Clostridiales Methanobacteriaceae 9 Bacteria Proteobacteria Deltaproteobacteria Myxococcales 16 Archaea YLA114 4 Bacteria Bacteroidetes KSA1 31 Archaea YLA114 3 Bacteria Planctomycetes OM190 CL500 38 Archaea YLA114 28 Bacteria Verrucomicrobia 72 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcus 19 Archaea YLA114 58 Bacteria Firmicutes Clostridia Clostridiales Bacillaceae 62 Bacteria Euryarchaeota Clostridia Clostridiales Methanobacteriaceae 29 Archaea YLA114 25 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 518 Bacteria Planctomycetes Phycisphaerae Methanobacteriales Methanobacteriaceae Methanobacterium 212 Bacteria Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae 75 Bacteria Planctomycetes Clostridia Clostridiales Pirellulaceae 276 Bacteria Euryarchaeota Gammaproteobacteria Archaeoglobales Archaeoglobaceae Archaeoglobus 445 Bacteria Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Nitrosopumilus 316 Bacteria Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Nitrosopumilus 20 Bacteria Proteobacteria Clostridia Clostridiales Ruminococcaceae Ruminococcus 50 Bacteria Planctomycetes Clostridia Clostridiales Pirellulaceae 86 Bacteria Firmicutes Clostridia Clostridiales Pirellulaceae 85 Bacteria Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera 19 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 18 Bacteria Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae Nitrosopumilus 16 Bacteria Euryarchaeota Clostridia Methanobacteriales pMC1 pMC1A4 22 Bacteria Euryarchaeota Clostridia Clostridiales Methanobacteriaceae Methanobacterium 3 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella 50 Archaea Crenarchaeota Thaumarchaeota Cenarchaeales Cenarchaeaceae 7 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 24 Bacteria Firmicutes Clostridia Clostridiales Lachnospiraceae 12 Bacteria Planctomycetes Acidobacteriia Acidobacteriales Methanobacteriaceae 96 Bacteria OD1 6 Bacteria Proteobacteria Clostridia Clostridiales Neisseriaceae Neisseria 13 Bacteria Planctomycetes Planctomycetia Pirellulales Pirellulaceae 42 Bacteria Planctomycetes Acidobacteriia Acidobacteriales Pirellulaceae 24 Bacteria Cyanobacteria Chloroplast Acidobacteriales 12 Bacteria Chloroflexi Anaerolineae SBR1031 SJA 5 Bacteria OD1 ZB2 44 Bacteria Planctomycetes Planctomycetia Pirellulales Pirellulaceae 3 Bacteria OD1 ZB2 7 Bacteria Chloroflexi Anaerolineae SBR1031 SHA 4 Bacteria OD1 ZB2 3 Bacteria Chloroflexi Anaerolineae SBR1031 SJA 6 Bacteria OD1 ZB2 3 Bacteria OD1 ZB2 21 Bacteria Acidobacteria Acidobacteria CCU21 3 Bacteria Chloroflexi Anaerolineae GCA004 13 Bacteria Cyanobacteria Oscillatoriophycideae Chroococcales Pirellulaceae 5 Bacteria Firmicutes Clostridia Clostridiales Ruminococcaceae 6 Bacteria OD1 6 Bacteria 4 Bacteria Chloroflexi Anaerolineae SBR1031 A4b 4 Bacteria OP11 OP11 5 Bacteria OP11 OP11 7 Bacteria Actinobacteria Acidimicrobiia Acidimicrobiales 13 Bacteria Chloroflexi Anaerolineae Anaerolineales Anaerolinaceae T78 5 Bacteria Planctomycetes Planctomycetia Pirellulales Pirellulaceae 3 Bacteria 3 Bacteria Actinobacteria Actinobacteria Actinomycetales Halobacteriaceae 3 Bacteria OD1 ZB2 6 Bacteria Proteobacteria Gammaproteobacteria Pirellulales Pirellulaceae 4 Bacteria Acidobacteria Acidobacteria 7 Bacteria Actinobacteria Acidimicrobiia Acidimicrobiales 9 Bacteria Planctomycetes Planctomycetia Planctomycetales Planctomycetaceae Planctomyces 4 Bacteria Armatimonadetes SJA RB046 9 Bacteria Proteobacteria Deltaproteobacteria Desulfuromonadales Pelobacteraceae 4 Bacteria Actinobacteria Acidimicrobiia Acidimicrobiales 4 Bacteria Tenericutes Mollicutes 3 Bacteria Firmicutes Bacilli Bacillales Bacillaceae