# Report for collapsed table: /data/shared_data/ZYJ_Amplicon/salt_marsh/taxonomy/SRR8931060/SRR8931060.faprotax # Collapsed table generated on: 2025.01.10 02:22:46 # Original table: /data/shared_data/ZYJ_Amplicon/salt_marsh/taxonomy/SRR8931060/SRR8931060.otuna.CAPs.fa.taxonomy.tsv # Details: # Original classical table contained 1007 rows and 3 columns # After filtering rows & columns, obtained a table containing 1007 rows & 2 columns # After (potentially) filtering out records based on name, obtained a table comprising 1007 records & 2 data entries per record # Used command: # /data/software/FAPROTAX/FAPROTAX_1.2.10/collapse_table.py -i /data/shared_data/ZYJ_Amplicon/salt_marsh/taxonomy/SRR8931060/SRR8931060.otuna.CAPs.fa.taxonomy.tsv -o /data/shared_data/ZYJ_Amplicon/salt_marsh/taxonomy/SRR8931060/SRR8931060.faprotax -g /data/software/FAPROTAX/FAPROTAX_1.2.10/FAPROTAX.txt -r /data/shared_data/ZYJ_Amplicon/salt_marsh/taxonomy/SRR8931060/SRR8931060.report.txt -v -d Taxon # # Summary of group assignments: # methanotrophy: 3 records # acetoclastic_methanogenesis: 0 records # methanogenesis_by_disproportionation_of_methyl_groups: 1 records # methanogenesis_using_formate: 0 records # methanogenesis_by_CO2_reduction_with_H2: 5 records # methanogenesis_by_reduction_of_methyl_compounds_with_H2: 0 records # hydrogenotrophic_methanogenesis: 5 records # methanogenesis: 6 records # methanol_oxidation: 3 records # methylotrophy: 6 records # aerobic_ammonia_oxidation: 0 records # aerobic_nitrite_oxidation: 0 records # nitrification: 0 records # sulfate_respiration: 15 records # sulfur_respiration: 0 records # dark_sulfite_oxidation: 0 records # sulfite_respiration: 4 records # thiosulfate_respiration: 0 records # respiration_of_sulfur_compounds: 15 records # arsenate_detoxification: 0 records # arsenate_respiration: 0 records # dissimilatory_arsenate_reduction: 0 records # arsenite_oxidation_detoxification: 0 records # arsenite_oxidation_energy_yielding: 0 records # dissimilatory_arsenite_oxidation: 0 records # anammox: 0 records # nitrate_denitrification: 2 records # nitrite_denitrification: 2 records # nitrous_oxide_denitrification: 0 records # denitrification: 2 records # chitinolysis: 4 records # knallgas_bacteria: 1 records # dark_hydrogen_oxidation: 9 records # nitrogen_fixation: 8 records # nitrate_ammonification: 1 records # nitrite_ammonification: 1 records # nitrite_respiration: 3 records # cellulolysis: 0 records # xylanolysis: 2 records # dark_sulfide_oxidation: 1 records # dark_sulfur_oxidation: 2 records # dark_thiosulfate_oxidation: 3 records # dark_oxidation_of_sulfur_compounds: 3 records # manganese_oxidation: 1 records # manganese_respiration: 0 records # ligninolysis: 0 records # fermentation: 20 records # aerobic_chemoheterotrophy: 87 records # invertebrate_parasites: 0 records # human_pathogens_septicemia: 0 records # human_pathogens_pneumonia: 0 records # human_pathogens_nosocomia: 0 records # human_pathogens_meningitis: 0 records # human_pathogens_gastroenteritis: 0 records # human_pathogens_diarrhea: 0 records # human_pathogens_all: 1 records # fish_parasites: 0 records # human_gut: 2 records # human_associated: 3 records # mammal_gut: 2 records # animal_parasites_or_symbionts: 3 records # plant_pathogen: 0 records # oil_bioremediation: 0 records # aromatic_hydrocarbon_degradation: 1 records # aromatic_compound_degradation: 10 records # aliphatic_non_methane_hydrocarbon_degradation: 1 records # hydrocarbon_degradation: 5 records # dark_iron_oxidation: 1 records # iron_respiration: 1 records # nitrate_respiration: 4 records # nitrate_reduction: 7 records # nitrogen_respiration: 4 records # fumarate_respiration: 1 records # intracellular_parasites: 0 records # chlorate_reducers: 0 records # predatory_or_exoparasitic: 8 records # chloroplasts: 0 records # nonphotosynthetic_cyanobacteria: 1 records # photosynthetic_cyanobacteria: 0 records # anoxygenic_photoautotrophy_H2_oxidizing: 0 records # anoxygenic_photoautotrophy_S_oxidizing: 0 records # anoxygenic_photoautotrophy_Fe_oxidizing: 0 records # anoxygenic_photoautotrophy: 0 records # oxygenic_photoautotrophy: 0 records # photoautotrophy: 0 records # aerobic_anoxygenic_phototrophy: 1 records # photoheterotrophy: 5 records # phototrophy: 5 records # plastic_degradation: 0 records # ureolysis: 7 records # reductive_acetogenesis: 0 records # chemoheterotrophy: 134 records # # Loaded 92 groups comprising 8355 members (5060 unique members) # Established 422 assignments of records to groups # 168 out of 1007 records (16.6832 %) were assigned to at least one group # 839 out of 1007 records (83.3168 %) could not be assigned to any group (leftovers) # 50 groups were represented (i.e. associated with at least one record) # Detailed group assignments are listed below # methanotrophy (3 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylocystis d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylocystis; s__Methylocystis rosea d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylomonadaceae; g__Methylobacter_A_601752 # acetoclastic_methanogenesis (0 records): # methanogenesis_by_disproportionation_of_methyl_groups (1 records): d__Archaea; p__Halobacteriota; c__Methanosarcinia; o__Methanosarcinales_A_2632; f__Methanosarcinaceae; g__Methanosarcina_2619 # methanogenesis_using_formate (0 records): # methanogenesis_by_CO2_reduction_with_H2 (5 records): d__Archaea; p__Halobacteriota; c__Methanosarcinia; o__Methanosarcinales_A_2632; f__Methanosarcinaceae; g__Methanosarcina_2619 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_A_1053 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_A_1053; s__Methanobacterium_A_1053 sp000309865 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_B d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_D_1054; s__Methanobacterium_D_1054 sp002505765 # methanogenesis_by_reduction_of_methyl_compounds_with_H2 (0 records): # hydrogenotrophic_methanogenesis (5 records): d__Archaea; p__Halobacteriota; c__Methanosarcinia; o__Methanosarcinales_A_2632; f__Methanosarcinaceae; g__Methanosarcina_2619 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_A_1053 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_A_1053; s__Methanobacterium_A_1053 sp000309865 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_B d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_D_1054; s__Methanobacterium_D_1054 sp002505765 # methanogenesis (6 records): d__Archaea; p__Halobacteriota; c__Methanocellia; o__Methanocellales; f__Methanocellaceae; g__Methanocella_A; s__Methanocella_A arvoryzae d__Archaea; p__Halobacteriota; c__Methanosarcinia; o__Methanosarcinales_A_2632; f__Methanosarcinaceae; g__Methanosarcina_2619 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_A_1053 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_A_1053; s__Methanobacterium_A_1053 sp000309865 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_B d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_D_1054; s__Methanobacterium_D_1054 sp002505765 # methanol_oxidation (3 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylobacterium d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Methylophilaceae; g__Novimethylophilus; s__Novimethylophilus kurashikiensis # methylotrophy (6 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylobacterium d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylocystis d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylocystis; s__Methylocystis rosea d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Methylophilaceae; g__Novimethylophilus; s__Novimethylophilus kurashikiensis d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylomonadaceae; g__Methylobacter_A_601752 # aerobic_ammonia_oxidation (0 records): # aerobic_nitrite_oxidation (0 records): # nitrification (0 records): # sulfate_respiration (15 records): d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales; f__Desulfatirhabdiaceae; g__Desulfatirhabdium; s__ d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales; f__UBA2174_A_457545; g__SpSt-501; s__SpSt-501 sp011328735 d__Bacteria; p__Desulfobacterota_I; c__Desulfobulbia; o__Desulfobulbales; f__Desulfobulbaceae; g__Desulfobulbus_A_451156; s__Desulfobulbus_A_451156 elongatus d__Bacteria; p__Desulfobacterota_I; c__Desulfobulbia; o__Desulfobulbales; f__Desulfocapsaceae; g__Desulfopila_A_450135; s__Desulfopila_A_450135 aestuarii d__Bacteria; p__Desulfobacterota_I; c__Desulfobulbia; o__Desulfobulbales; f__Desulfocapsaceae; g__Desulfoprunum_449678; s__Desulfoprunum benzoelyticum d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__Desulfovirga; s__Desulfovirga adipica d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__Desulfovirga; s__Desulfovirga adipica d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__Desulfovirga; s__Desulfovirga adipica d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__SbD1 d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__SbD1 d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__SbD1; s__ d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__SbD1; s__SbD1 sp001603845 # sulfur_respiration (0 records): # dark_sulfite_oxidation (0 records): # sulfite_respiration (4 records): d__Bacteria; p__Desulfobacterota_I; c__Desulfobulbia; o__Desulfobulbales; f__Desulfobulbaceae; g__Desulfobulbus_A_451156; s__Desulfobulbus_A_451156 elongatus d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__Desulfovirga; s__Desulfovirga adipica d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__Desulfovirga; s__Desulfovirga adipica d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__Desulfovirga; s__Desulfovirga adipica # thiosulfate_respiration (0 records): # respiration_of_sulfur_compounds (15 records): d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales; f__Desulfatirhabdiaceae; g__Desulfatirhabdium; s__ d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales; f__UBA2174_A_457545; g__SpSt-501; s__SpSt-501 sp011328735 d__Bacteria; p__Desulfobacterota_I; c__Desulfobulbia; o__Desulfobulbales; f__Desulfobulbaceae; g__Desulfobulbus_A_451156; s__Desulfobulbus_A_451156 elongatus d__Bacteria; p__Desulfobacterota_I; c__Desulfobulbia; o__Desulfobulbales; f__Desulfocapsaceae; g__Desulfopila_A_450135; s__Desulfopila_A_450135 aestuarii d__Bacteria; p__Desulfobacterota_I; c__Desulfobulbia; o__Desulfobulbales; f__Desulfocapsaceae; g__Desulfoprunum_449678; s__Desulfoprunum benzoelyticum d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__Desulfovirga; s__Desulfovirga adipica d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__Desulfovirga; s__Desulfovirga adipica d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__Desulfovirga; s__Desulfovirga adipica d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__SbD1 d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__SbD1 d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__SbD1; s__ d__Bacteria; p__Desulfobacterota_I; c__Syntrophobacteria; o__Syntrophobacterales; f__Syntrophobacteraceae; g__SbD1; s__SbD1 sp001603845 # arsenate_detoxification (0 records): # arsenate_respiration (0 records): # dissimilatory_arsenate_reduction (0 records): # arsenite_oxidation_detoxification (0 records): # arsenite_oxidation_energy_yielding (0 records): # dissimilatory_arsenite_oxidation (0 records): # anammox (0 records): # nitrate_denitrification (2 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Sulfuricellaceae_A; g__Sulfuricella; s__Sulfuricella denitrificans # nitrite_denitrification (2 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Sulfuricellaceae_A; g__Sulfuricella; s__Sulfuricella denitrificans # nitrous_oxide_denitrification (0 records): # denitrification (2 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Sulfuricellaceae_A; g__Sulfuricella; s__Sulfuricella denitrificans # chitinolysis (4 records): d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales_616009; f__Xanthomonadaceae_616009; g__Lysobacter_A_615715; s__Lysobacter_A dokdonensis d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales_616009; f__Xanthomonadaceae_616009; g__Lysobacter_A_615995 # knallgas_bacteria (1 records): d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans # dark_hydrogen_oxidation (9 records): d__Archaea; p__Halobacteriota; c__Methanosarcinia; o__Methanosarcinales_A_2632; f__Methanosarcinaceae; g__Methanosarcina_2619 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_A_1053 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_A_1053; s__Methanobacterium_A_1053 sp000309865 d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_B d__Archaea; p__Methanobacteriota_A_1229; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium_D_1054; s__Methanobacterium_D_1054 sp002505765 d__Bacteria; p__Desulfobacterota_I; c__Desulfobulbia; o__Desulfobulbales; f__Desulfocapsaceae; g__Desulfopila_A_450135; s__Desulfopila_A_450135 aestuarii d__Bacteria; p__Desulfobacterota_I; c__Desulfobulbia; o__Desulfobulbales; f__Desulfocapsaceae; g__Desulfoprunum_449678; s__Desulfoprunum benzoelyticum d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus # nitrogen_fixation (8 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Azospirillum d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Azospirillum d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_501396; f__Rhizobiaceae_A_499470; g__Mesorhizobium_F_498388 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_501396; f__Rhizobiaceae_A_499470; g__Mesorhizobium_F_498388; s__Mesorhizobium_F_498388 qingshengii d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Beijerinckia d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylocystis d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylocystis; s__Methylocystis rosea d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_650611; f__Pseudomonadaceae; g__Azotobacter_648123; s__Azotobacter salinestris # nitrate_ammonification (1 records): d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans # nitrite_ammonification (1 records): d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans # nitrite_respiration (3 records): d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Sulfuricellaceae_A; g__Sulfuricella; s__Sulfuricella denitrificans # cellulolysis (0 records): # xylanolysis (2 records): d__Bacteria; p__Acidobacteriota; c__Acidobacteriae; o__Acidobacteriales; f__Koribacteraceae; g__Koribacter; s__Koribacter versatilis_A d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_900466; g__Chryseolinea; s__Chryseolinea serpens # dark_sulfide_oxidation (1 records): d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Sulfurimonadaceae; g__Sulfuricurvum; s__Sulfuricurvum kujiense_A_474120 # dark_sulfur_oxidation (2 records): d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Sulfurimonadaceae; g__Sulfuricurvum; s__Sulfuricurvum kujiense_A_474120 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Sulfuricellaceae_A; g__Sulfuricella; s__Sulfuricella denitrificans # dark_thiosulfate_oxidation (3 records): d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Sulfurimonadaceae; g__Sulfuricurvum; s__Sulfuricurvum kujiense_A_474120 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Sulfuricellaceae_A; g__Sulfuricella; s__Sulfuricella denitrificans d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Thiobacillaceae; g__Thiobacillus; s__Thiobacillus thiophilus # dark_oxidation_of_sulfur_compounds (3 records): d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Sulfurimonadaceae; g__Sulfuricurvum; s__Sulfuricurvum kujiense_A_474120 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Sulfuricellaceae_A; g__Sulfuricella; s__Sulfuricella denitrificans d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Thiobacillaceae; g__Thiobacillus; s__Thiobacillus thiophilus # manganese_oxidation (1 records): d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Geodermatophilaceae; g__Geodermatophilus_A # manganese_respiration (0 records): # ligninolysis (0 records): # fermentation (20 records): d__Bacteria; p__Acidobacteriota; c__Holophagae; o__Holophagales; f__Holophagaceae; g__Geothrix d__Bacteria; p__Acidobacteriota; c__Holophagae; o__Holophagales; f__Holophagaceae; g__Geothrix d__Bacteria; p__Acidobacteriota; c__Holophagae; o__Holophagales; f__Holophagaceae; g__Geothrix d__Bacteria; p__Acidobacteriota; c__Holophagae; o__Holophagales; f__Holophagaceae; g__Geothrix; s__ d__Bacteria; p__Acidobacteriota; c__Holophagae; o__Holophagales; f__Holophagaceae; g__Geothrix; s__ d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Cellulomonadaceae; g__Cellulomonas d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Propionibacteriaceae; g__Propionicimonas; s__Propionicimonas paludicola d__Bacteria; p__Desulfobacterota_I; c__Desulfobulbia; o__Desulfobulbales; f__Desulfobulbaceae; g__Desulfobulbus_A_451156; s__Desulfobulbus_A_451156 elongatus d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Caloramatoraceae; g__Clostridium_AB; s__Clostridium_AB cylindrosporum d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Caloramatoraceae; g__Clostridium_AB; s__Clostridium_AB cylindrosporum d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Caloramatoraceae; g__Clostridium_AB; s__Clostridium_AB cylindrosporum d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_AM; s__Clostridium_AM magnum d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Peptostreptococcales; f__Peptostreptococcaceae_256921 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Peptostreptococcales; f__Peptostreptococcaceae_256921 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Peptostreptococcales; f__Peptostreptococcaceae_256921; g__Sporacetigenium; s__Sporacetigenium mesophilum d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Skermanella d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Skermanella d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_592522; f__Burkholderiaceae_A_592522; g__Rhodoferax_A_585629 # aerobic_chemoheterotrophy (87 records): d__Bacteria; p__Acidobacteriota; c__Acidobacteriae; o__Acidobacteriales; f__Acidobacteriaceae; g__Granulicella_A_416163; s__Granulicella_A_416163 cerasi d__Bacteria; p__Acidobacteriota; c__Acidobacteriae; o__Acidobacteriales; f__Acidobacteriaceae; g__Granulicella_A_416614; s__Granulicella_A_416614 paludicola d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Cellulomonadaceae; g__Cellulomonas d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Dermatophilaceae_390796; g__Oryzihumus_390144; s__Oryzihumus leptocrescens d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Cryobacterium_C d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Micrococcaceae; g__Kocuria; s__Kocuria rosea d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Jatrophihabitantaceae; g__Jatrophihabitans_372606; s__Jatrophihabitans endophyticus d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Micromonosporaceae; g__Actinoplanes d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Micromonosporaceae; g__Dactylosporangium d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Nakamurellaceae; g__Nakamurella; s__Nakamurella flava d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Nakamurellaceae; g__Nakamurella; s__Nakamurella multipartita d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Pseudonocardiaceae; g__Kutzneria d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Pseudonocardiaceae; g__Pseudonocardia d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Pseudonocardiaceae; g__Saccharopolyspora_C_379454 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Nitriliruptorales; f__Nitriliruptoraceae; g__CSSed11-175R1; s__CSSed11-175R1 sp007136095 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Nitriliruptorales; f__Nitriliruptoraceae; g__Egicoccus; s__Egicoccus halophilus d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Nitriliruptorales; f__Nitriliruptoraceae; g__Nitriliruptor; s__Nitriliruptor alkaliphilus d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Marmoricola_A_392027 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 cynanchi d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 ganghwensis d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 silvaticus d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 taihuensis d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Propionibacteriaceae; g__Propionicimonas; s__Propionicimonas paludicola d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales_400645; f__Streptomycetaceae_400641; g__Streptomyces_G_395345 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales_400645; f__Streptomycetaceae_400641; g__Streptomyces_G_399870 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales_400645; f__Streptomycetaceae_400641; g__Streptomyces_G_399870 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptosporangiales; f__Streptosporangiaceae; g__Nonomuraea_394555 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptosporangiales; f__Streptosporangiaceae; g__Streptosporangium d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_900466; g__Chryseolinea; s__ d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_900466; g__Chryseolinea; s__Chryseolinea serpens d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_900466; g__Chryseotalea; s__ d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_900466; g__ELB16-189; s__ELB16-189 sp001567185 d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_902095; g__Anditalea; s__Anditalea andensis d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_902095; g__Mongoliicoccus d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales_877923; f__Flavobacteriaceae; g__Gillisia; s__Gillisia arcticum d__Bacteria; p__Firmicutes_D; c__Bacilli; o__Bacillales_A; f__Planococcaceae; g__Planococcus; s__Planomicrobium iranicum d__Bacteria; p__Firmicutes_D; c__Bacilli; o__Paenibacillales; f__Paenibacillaceae_367444; g__Paenibacillus_J_366884 d__Bacteria; p__Firmicutes_D; c__Bacilli; o__Tumebacillales; f__Tumebacillaceae; g__Tumebacillus_A; s__Tumebacillus_A ginsengisoli d__Bacteria; p__Gemmatimonadota; c__Gemmatimonadetes; o__Gemmatimonadales; f__Gemmatimonadaceae; g__Gemmatimonas; s__Gemmatimonas aurantiaca d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Paracraurococcus_506929; s__Paracraurococcus ruber_A d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Paracraurococcus_506950 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Azospirillum d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Azospirillum d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Skermanella d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Skermanella d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Caulobacterales; f__Caulobacteraceae; g__Caulobacter_487784 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Reyranellales; f__Reyranellaceae; g__Reyranella d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Reyranellales; f__Reyranellaceae; g__Reyranella; s__ d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Reyranellales; f__Reyranellaceae; g__Reyranella; s__Reyranella aquatilis d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_501396; f__Rhizobiaceae_A_499470; g__Mesorhizobium_F_498388 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_501396; f__Rhizobiaceae_A_499470; g__Mesorhizobium_F_498388; s__Mesorhizobium_F_498388 qingshengii d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_502138; f__Devosiaceae; g__Devosia_A_501803 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_502138; f__Devosiaceae; g__Devosia_A_501803; s__Devosia_A_501803 confluentis d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Microvirga d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Microvirga d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Labraceae; g__Labrys_504686 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504721; f__Hyphomicrobiaceae; g__Hyphomicrobium_A d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504721; f__Hyphomicrobiaceae; g__Hyphomicrobium_A d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504721; f__Hyphomicrobiaceae; g__Hyphomicrobium_A; s__Hyphomicrobium_A sp002279935 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504721; f__Hyphomicrobiaceae; g__Hyphomicrobium_A; s__Hyphomicrobium_A sulfonivorans d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Allosphingosinicella; s__Allosphingosinicella sp003347635 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Rhizorhabdus_483366 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomicrobium_483265 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomicrobium_483265; s__Sphingomicrobium daechungense d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas_L_486704 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_592522; f__Burkholderiaceae_A_592522; g__Rhodoferax_A_585629 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_592522; f__Burkholderiaceae_A_592522; g__Rubrivivax d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_650611; f__Pseudomonadaceae; g__Azotobacter_648123; s__Azotobacter salinestris d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_650611; f__Pseudomonadaceae; g__Pseudomonas_A; s__ d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_660879; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter brisouii d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_660879; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter towneri_A d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales_613062; f__Rhodanobacteraceae_613062; g__Rhodanobacter_612715 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales_616009; f__Xanthomonadaceae_616009; g__Arenimonas_613591; s__Arenimonas oryziterrae d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales_616009; f__Xanthomonadaceae_616009; g__Arenimonas_613591; s__Arenimonas oryziterrae # invertebrate_parasites (0 records): # human_pathogens_septicemia (0 records): # human_pathogens_pneumonia (0 records): # human_pathogens_nosocomia (0 records): # human_pathogens_meningitis (0 records): # human_pathogens_gastroenteritis (0 records): # human_pathogens_diarrhea (0 records): # human_pathogens_all (1 records): d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Nocardia; s__Nocardia nova_A_375802 # fish_parasites (0 records): # human_gut (2 records): d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 # human_associated (3 records): d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Nocardia; s__Nocardia nova_A_375802 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 # mammal_gut (2 records): d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 # animal_parasites_or_symbionts (3 records): d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Nocardia; s__Nocardia nova_A_375802 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 # plant_pathogen (0 records): # oil_bioremediation (0 records): # aromatic_hydrocarbon_degradation (1 records): d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Nevskiales; f__Algiphilaceae; g__Algiphilus; s__Algiphilus aromaticivorans # aromatic_compound_degradation (10 records): d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 cynanchi d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 ganghwensis d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 silvaticus d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 taihuensis d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Nevskiales; f__Algiphilaceae; g__Algiphilus; s__Algiphilus aromaticivorans d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_660879; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter brisouii d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_660879; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter towneri_A # aliphatic_non_methane_hydrocarbon_degradation (1 records): d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Nevskiales; f__Algiphilaceae; g__Algiphilus; s__Algiphilus aromaticivorans # hydrocarbon_degradation (5 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylocystis d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylocystis; s__Methylocystis rosea d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylomonadaceae; g__Methylobacter_A_601752 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Nevskiales; f__Algiphilaceae; g__Algiphilus; s__Algiphilus aromaticivorans d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_641030; f__Halomonadaceae_641030; g__Halomonas_C_640094; s__Halomonas_C_640094 montanilacus # dark_iron_oxidation (1 records): d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Gallionellaceae; g__Gallionella; s__Gallionella kumadai # iron_respiration (1 records): d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans # nitrate_respiration (4 records): d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Sulfuricellaceae_A; g__Sulfuricella; s__Sulfuricella denitrificans d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Thiobacillaceae; g__Thiobacillus; s__Thiobacillus thiophilus # nitrate_reduction (7 records): d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Micrococcaceae; g__Kocuria; s__Kocuria rosea d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Paracraurococcus_506929; s__Paracraurococcus ruber_A d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_592522; f__Burkholderiaceae_A_592522; g__Ideonella_A_591966; s__ d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Sulfuricellaceae_A; g__Sulfuricella; s__Sulfuricella denitrificans d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Thiobacillaceae; g__Thiobacillus; s__Thiobacillus thiophilus # nitrogen_respiration (4 records): d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Sulfuricellaceae_A; g__Sulfuricella; s__Sulfuricella denitrificans d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Thiobacillaceae; g__Thiobacillus; s__Thiobacillus thiophilus # fumarate_respiration (1 records): d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans # intracellular_parasites (0 records): # chlorate_reducers (0 records): # predatory_or_exoparasitic (8 records): d__Bacteria; p__Bdellovibrionota_E; c__Bdellovibrionia_A_473294; o__Bdellovibrionales; f__Bdellovibrionaceae; g__Bdellovibrio d__Bacteria; p__Bdellovibrionota_E; c__Bdellovibrionia_A_473294; o__Bdellovibrionales; f__Bdellovibrionaceae; g__Pseudobdellovibrio; s__Pseudobdellovibrio exovorus d__Bacteria; p__Myxococcota_A_473307; c__Polyangia_463783; o__Haliangiales_463188; f__Haliangiaceae_463188; g__Haliangium_463188; s__Haliangium ochraceum d__Bacteria; p__Myxococcota_A_473307; c__Polyangia_463783; o__Haliangiales_463188; f__Haliangiaceae_463188; g__Haliangium_463188; s__Haliangium ochraceum d__Bacteria; p__Myxococcota_A_473307; c__Polyangia_463783; o__Haliangiales_463188; f__Haliangiaceae_463188; g__Haliangium_463188; s__Haliangium ochraceum d__Bacteria; p__Myxococcota_A_473307; c__Polyangia_463783; o__Haliangiales_463188; f__Haliangiaceae_463188; g__Haliangium_463188; s__Haliangium ochraceum d__Bacteria; p__Myxococcota_A_473307; c__Polyangia_463783; o__Haliangiales_463188; f__Haliangiaceae_463188; g__Haliangium_463188; s__Haliangium ochraceum d__Bacteria; p__Myxococcota_A_473307; c__Polyangia_463783; o__Haliangiales_463188; f__Haliangiaceae_463188; g__Haliangium_463188; s__Haliangium ochraceum # chloroplasts (0 records): # nonphotosynthetic_cyanobacteria (1 records): d__Bacteria; p__Cyanobacteria; c__Sericytochromatia; o__UBA7694; f__UBA7694; g__GCA-2770975; s__ # photosynthetic_cyanobacteria (0 records): # anoxygenic_photoautotrophy_H2_oxidizing (0 records): # anoxygenic_photoautotrophy_S_oxidizing (0 records): # anoxygenic_photoautotrophy_Fe_oxidizing (0 records): # anoxygenic_photoautotrophy (0 records): # oxygenic_photoautotrophy (0 records): # photoautotrophy (0 records): # aerobic_anoxygenic_phototrophy (1 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Paracraurococcus_506929; s__Paracraurococcus ruber_A # photoheterotrophy (5 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Paracraurococcus_506929; s__Paracraurococcus ruber_A d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Paracraurococcus_506950 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Rhodopila_506777; s__Rhodopila sp009765975 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Rhodoblastus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_592522; f__Burkholderiaceae_A_592522; g__Rhodoferax_A_585629 # phototrophy (5 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Paracraurococcus_506929; s__Paracraurococcus ruber_A d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Paracraurococcus_506950 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Rhodopila_506777; s__Rhodopila sp009765975 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Rhodoblastus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_592522; f__Burkholderiaceae_A_592522; g__Rhodoferax_A_585629 # plastic_degradation (0 records): # ureolysis (7 records): d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Paracraurococcus_506929; s__Paracraurococcus ruber_A d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Azospirillum d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Azospirillum d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_501396; f__Rhizobiaceae_A_499470; g__Mesorhizobium_F_498388 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_501396; f__Rhizobiaceae_A_499470; g__Mesorhizobium_F_498388; s__Mesorhizobium_F_498388 qingshengii d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylobacterium d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_650611; f__Pseudomonadaceae; g__Azotobacter_648123; s__Azotobacter salinestris # reductive_acetogenesis (0 records): # chemoheterotrophy (134 records): d__Archaea; p__Halobacteriota; c__Methanosarcinia; o__Methanosarcinales_A_2632; f__Methanosarcinaceae; g__Methanosarcina_2619 d__Bacteria; p__Acidobacteriota; c__Acidobacteriae; o__Acidobacteriales; f__Acidobacteriaceae; g__Granulicella_A_416163; s__Granulicella_A_416163 cerasi d__Bacteria; p__Acidobacteriota; c__Acidobacteriae; o__Acidobacteriales; f__Acidobacteriaceae; g__Granulicella_A_416614; s__Granulicella_A_416614 paludicola d__Bacteria; p__Acidobacteriota; c__Acidobacteriae; o__Acidobacteriales; f__Koribacteraceae; g__Koribacter; s__Koribacter versatilis_A d__Bacteria; p__Acidobacteriota; c__Holophagae; o__Holophagales; f__Holophagaceae; g__Geothrix d__Bacteria; p__Acidobacteriota; c__Holophagae; o__Holophagales; f__Holophagaceae; g__Geothrix d__Bacteria; p__Acidobacteriota; c__Holophagae; o__Holophagales; f__Holophagaceae; g__Geothrix d__Bacteria; p__Acidobacteriota; c__Holophagae; o__Holophagales; f__Holophagaceae; g__Geothrix; s__ d__Bacteria; p__Acidobacteriota; c__Holophagae; o__Holophagales; f__Holophagaceae; g__Geothrix; s__ d__Bacteria; p__Acidobacteriota; c__Vicinamibacteria; o__Vicinamibacterales d__Bacteria; p__Acidobacteriota; c__Vicinamibacteria; o__Vicinamibacterales d__Bacteria; p__Acidobacteriota; c__Vicinamibacteria; o__Vicinamibacterales d__Bacteria; p__Acidobacteriota; c__Vicinamibacteria; o__Vicinamibacterales d__Bacteria; p__Acidobacteriota; c__Vicinamibacteria; o__Vicinamibacterales; f__UBA2999 d__Bacteria; p__Acidobacteriota; c__Vicinamibacteria; o__Vicinamibacterales; f__UBA2999; g__; s__ d__Bacteria; p__Acidobacteriota; c__Vicinamibacteria; o__Vicinamibacterales; f__UBA2999; g__Gp6-AA45; s__ d__Bacteria; p__Acidobacteriota; c__Vicinamibacteria; o__Vicinamibacterales; f__UBA8438; g__UBA8438; s__ d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Cellulomonadaceae; g__Cellulomonas d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Dermatophilaceae_390796; g__Oryzihumus_390144; s__Oryzihumus leptocrescens d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Cryobacterium_C d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Micrococcaceae; g__Kocuria; s__Kocuria rosea d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Jatrophihabitantaceae; g__Jatrophihabitans_372606; s__Jatrophihabitans endophyticus d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Micromonosporaceae; g__Actinoplanes d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Micromonosporaceae; g__Dactylosporangium d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Nakamurellaceae; g__Nakamurella; s__Nakamurella flava d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Nakamurellaceae; g__Nakamurella; s__Nakamurella multipartita d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Pseudonocardiaceae; g__Kutzneria d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Pseudonocardiaceae; g__Pseudonocardia d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Pseudonocardiaceae; g__Saccharopolyspora_C_379454 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Nitriliruptorales; f__Nitriliruptoraceae; g__CSSed11-175R1; s__CSSed11-175R1 sp007136095 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Nitriliruptorales; f__Nitriliruptoraceae; g__Egicoccus; s__Egicoccus halophilus d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Nitriliruptorales; f__Nitriliruptoraceae; g__Nitriliruptor; s__Nitriliruptor alkaliphilus d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Marmoricola_A_392027 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 cynanchi d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 ganghwensis d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 silvaticus d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Nocardioides_A_392796; s__Nocardioides_A_392796 taihuensis d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Propionibacteriaceae; g__Propionicimonas; s__Propionicimonas paludicola d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales_400645; f__Streptomycetaceae_400641; g__Streptomyces_G_395345 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales_400645; f__Streptomycetaceae_400641; g__Streptomyces_G_399870 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales_400645; f__Streptomycetaceae_400641; g__Streptomyces_G_399870 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptosporangiales; f__Streptosporangiaceae; g__Nonomuraea_394555 d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptosporangiales; f__Streptosporangiaceae; g__Streptosporangium d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_900466; g__Chryseolinea; s__ d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_900466; g__Chryseolinea; s__Chryseolinea serpens d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_900466; g__Chryseotalea; s__ d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_900466; g__ELB16-189; s__ELB16-189 sp001567185 d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_902095; g__Anditalea; s__Anditalea andensis d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae_902095; g__Mongoliicoccus d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales_877923; f__Flavobacteriaceae; g__Gillisia; s__Gillisia arcticum d__Bacteria; p__Chloroflexota; c__Anaerolineae; o__Anaerolineales; f__Anaerolineaceae_409200 d__Bacteria; p__Chloroflexota; c__Anaerolineae; o__Anaerolineales; f__Anaerolineaceae_409200 d__Bacteria; p__Chloroflexota; c__Anaerolineae; o__Anaerolineales; f__Anaerolineaceae_409200 d__Bacteria; p__Chloroflexota; c__Anaerolineae; o__Anaerolineales; f__Anaerolineaceae_409200 d__Bacteria; p__Chloroflexota; c__Anaerolineae; o__Anaerolineales; f__Anaerolineaceae_409200; g__DSYU01; s__DSYU01 sp011367365 d__Bacteria; p__Chloroflexota; c__Anaerolineae; o__Caldilineales; f__Caldilineaceae; g__; s__ d__Bacteria; p__Chloroflexota; c__Anaerolineae; o__Caldilineales; f__Caldilineaceae; g__; s__ d__Bacteria; p__Chloroflexota; c__Anaerolineae; o__Caldilineales; f__Caldilineaceae; g__; s__ d__Bacteria; p__Chloroflexota; c__Anaerolineae; o__Caldilineales; f__Caldilineaceae; g__; s__ d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales; f__Desulfatirhabdiaceae; g__Desulfatirhabdium; s__ d__Bacteria; p__Desulfobacterota_I; c__Desulfobacteria; o__Desulfobacterales; f__UBA2174_A_457545; g__SpSt-501; s__SpSt-501 sp011328735 d__Bacteria; p__Desulfobacterota_I; c__Desulfobulbia; o__Desulfobulbales; f__Desulfobulbaceae; g__Desulfobulbus_A_451156; s__Desulfobulbus_A_451156 elongatus d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Caloramatoraceae; g__Clostridium_AB; s__Clostridium_AB cylindrosporum d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Caloramatoraceae; g__Clostridium_AB; s__Clostridium_AB cylindrosporum d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Caloramatoraceae; g__Clostridium_AB; s__Clostridium_AB cylindrosporum d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_AM; s__Clostridium_AM magnum d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Clostridiales; f__Clostridiaceae_222000; g__Clostridium_T; s__Clostridium_T paraputrificum_208099 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Peptostreptococcales; f__Peptostreptococcaceae_256921 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Peptostreptococcales; f__Peptostreptococcaceae_256921 d__Bacteria; p__Firmicutes_A; c__Clostridia_258483; o__Peptostreptococcales; f__Peptostreptococcaceae_256921; g__Sporacetigenium; s__Sporacetigenium mesophilum d__Bacteria; p__Firmicutes_D; c__Bacilli; o__Bacillales_A; f__Planococcaceae; g__Planococcus; s__Planomicrobium iranicum d__Bacteria; p__Firmicutes_D; c__Bacilli; o__Paenibacillales; f__Paenibacillaceae_367444; g__Paenibacillus_J_366884 d__Bacteria; p__Firmicutes_D; c__Bacilli; o__Tumebacillales; f__Tumebacillaceae; g__Tumebacillus_A; s__Tumebacillus_A ginsengisoli d__Bacteria; p__Gemmatimonadota; c__Gemmatimonadetes; o__Gemmatimonadales; f__Gemmatimonadaceae; g__Gemmatimonas; s__Gemmatimonas aurantiaca d__Bacteria; p__Myxococcota_A_473307; c__Myxococcia; o__Myxococcales; f__Anaeromyxobacteraceae; g__Anaeromyxobacter; s__Anaeromyxobacter dehalogenans d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Paracraurococcus_506929; s__Paracraurococcus ruber_A d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Paracraurococcus_506950 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Azospirillum d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Azospirillum d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Skermanella d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Azospirillales_507929; f__Azospirillaceae_507917; g__Skermanella d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Caulobacterales; f__Caulobacteraceae; g__Caulobacter_487784 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Reyranellales; f__Reyranellaceae; g__Reyranella d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Reyranellales; f__Reyranellaceae; g__Reyranella; s__ d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Reyranellales; f__Reyranellaceae; g__Reyranella; s__Reyranella aquatilis d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_501396; f__Rhizobiaceae_A_499470; g__Mesorhizobium_F_498388 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_501396; f__Rhizobiaceae_A_499470; g__Mesorhizobium_F_498388; s__Mesorhizobium_F_498388 qingshengii d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_502138; f__Devosiaceae; g__Devosia_A_501803 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_502138; f__Devosiaceae; g__Devosia_A_501803; s__Devosia_A_501803 confluentis d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylobacterium d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylocystis d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Methylocystis; s__Methylocystis rosea d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Microvirga d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Beijerinckiaceae; g__Microvirga d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504705; f__Labraceae; g__Labrys_504686 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504721; f__Hyphomicrobiaceae; g__Hyphomicrobium_A d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504721; f__Hyphomicrobiaceae; g__Hyphomicrobium_A d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504721; f__Hyphomicrobiaceae; g__Hyphomicrobium_A; s__Hyphomicrobium_A sp002279935 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales_A_504721; f__Hyphomicrobiaceae; g__Hyphomicrobium_A; s__Hyphomicrobium_A sulfonivorans d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Allosphingosinicella; s__Allosphingosinicella sp003347635 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Rhizorhabdus_483366 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomicrobium_483265 d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomicrobium_483265; s__Sphingomicrobium daechungense d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas_L_486704 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_592522; f__Burkholderiaceae_A_592522; g__Rhodoferax_A_585629 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_592522; f__Burkholderiaceae_A_592522; g__Rubrivivax d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales_597441; f__Methylophilaceae; g__Novimethylophilus; s__Novimethylophilus kurashikiensis d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylomonadaceae; g__Methylobacter_A_601752 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Nevskiales; f__Algiphilaceae; g__Algiphilus; s__Algiphilus aromaticivorans d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_641030; f__Halomonadaceae_641030; g__Halomonas_C_640094; s__Halomonas_C_640094 montanilacus d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_650611; f__Pseudomonadaceae; g__Azotobacter_648123; s__Azotobacter salinestris d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_650611; f__Pseudomonadaceae; g__Pseudomonas_A; s__ d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_660879; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter brisouii d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales_660879; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter towneri_A d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales_613062; f__Rhodanobacteraceae_613062; g__Rhodanobacter_612715 d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales_616009; f__Xanthomonadaceae_616009; g__Arenimonas_613591; s__Arenimonas oryziterrae d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales_616009; f__Xanthomonadaceae_616009; g__Arenimonas_613591; s__Arenimonas oryziterrae d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales_616009; f__Xanthomonadaceae_616009; g__Lysobacter_A_615715; s__Lysobacter_A dokdonensis d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales_616009; f__Xanthomonadaceae_616009; g__Lysobacter_A_615995