## Sat Jan 4 00:18:46 2025 ## emapper-2.1.12 ## /data/home/zhuyingjie/miniforge3/envs/eggnog/bin/emapper.py -i /data/home/zhuyingjie/01_Project/01_metagenome/mangrove/mmseqs_cluster/PRJNA629394/SRR11734597/SRR11734597_p_cluster_rep_seq.fasta --output PRJNA629394_SRR11734597 --data_dir /data/software/eggnog_database -m diamond --sensmode fast --output_dir /data/home/zhuyingjie/01_Project/01_metagenome/mangrove/annotation --temp_dir /data/software/eggnog_database/temp --excel --dbmem --cpu 24 ## #query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs k59_1073_2 370438.PTH_2468 3.84e-93 293.0 COG3344@1|root,COG3344@2|Bacteria,1TP9A@1239|Firmicutes,248M4@186801|Clostridia,2607J@186807|Peptococcaceae 186801|Clostridia L Similarity to COG3344 Retron-type reverse transcriptase(Evalue - - 2.7.7.49 ko:K00986 - - - - ko00000,ko01000 - - - GIIM,RVT_1 k59_877_1 1264700.L0MXE9_9CAUD 1.36e-20 90.5 4QGW7@10239|Viruses,4QZSG@35237|dsDNA viruses no RNA stage,4QPVG@28883|Caudovirales,4QK98@10662|Myoviridae 10662|Myoviridae - - - - - - - - - - - - - - - k59_144_1 880070.Cycma_5020 1.82e-50 184.0 COG3385@1|root,COG3385@2|Bacteria,4NQCC@976|Bacteroidetes,47RFB@768503|Cytophagia 976|Bacteroidetes L PFAM Transposase DDE domain - - - - - - - - - - - - DDE_Tnp_1 k59_2083_1 13249.RPRC004498-PA 7.44e-50 172.0 2CNBX@1|root,2QV3V@2759|Eukaryota,39W09@33154|Opisthokonta,3BH5J@33208|Metazoa,3E62V@33213|Bilateria,42B7K@6656|Arthropoda,3T0MX@50557|Insecta,3EEBZ@33342|Paraneoptera 33208|Metazoa - - - - - - - - - - - - - - - k59_1954_1 655815.ZPR_3005 1.94e-124 361.0 COG3293@1|root,COG3293@2|Bacteria,4NM10@976|Bacteroidetes,1I0ZW@117743|Flavobacteriia 976|Bacteroidetes L PFAM Transposase, IS4-like - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_2,DDE_Tnp_4,DUF4096 k59_1493_1 349161.Dred_0300 6.17e-122 374.0 COG4584@1|root,COG4584@2|Bacteria,1UW0T@1239|Firmicutes,24AQA@186801|Clostridia,261N3@186807|Peptococcaceae 186801|Clostridia L PFAM integrase - - - - - - - - - - - - HTH_23,rve k59_1493_2 1347393.HG726019_gene7867 1.14e-99 298.0 COG1484@1|root,COG1484@2|Bacteria,4NM7S@976|Bacteroidetes,2FQJH@200643|Bacteroidia,4AWBX@815|Bacteroidaceae 976|Bacteroidetes L IstB-like ATP binding protein - - - - - - - - - - - - IstB_IS21 k59_1699_1 551895.B5AX75_9CAUD 1.89e-25 103.0 4QDVS@10239|Viruses,4QXKQ@35237|dsDNA viruses no RNA stage,4QSYC@28883|Caudovirales,4QJV5@10662|Myoviridae 10662|Myoviridae - - - - - - - - - - - - - - - k59_158_1 1122599.AUGR01000010_gene950 1.26e-158 451.0 COG3547@1|root,COG3547@2|Bacteria,1NGR7@1224|Proteobacteria,1RMF9@1236|Gammaproteobacteria,1XKC6@135619|Oceanospirillales 135619|Oceanospirillales L Transposase - - - - - - - - - - - - DEDD_Tnp_IS110,Transposase_20 k59_1151_1 981085.XP_010106597.1 1.4e-45 151.0 2DF3V@1|root,2S5RJ@2759|Eukaryota,37Z86@33090|Viridiplantae,3GP2Q@35493|Streptophyta,4JUN9@91835|fabids 35493|Streptophyta - - - - - - - - - - - - - - - k59_430_1 572479.Hprae_1422 1.22e-49 172.0 COG3344@1|root,COG3344@2|Bacteria,1TP9A@1239|Firmicutes,248M4@186801|Clostridia,3WBJB@53433|Halanaerobiales 186801|Clostridia L PFAM Reverse transcriptase (RNA-dependent DNA polymerase) - - - - - - - - - - - - GIIM,RVT_1 k59_905_1 616991.JPOO01000003_gene2234 8.96e-132 386.0 COG0517@1|root,COG0517@2|Bacteria,4NHKP@976|Bacteroidetes,1HYR8@117743|Flavobacteriia,23FUA@178469|Arenibacter 976|Bacteroidetes S Putative transposase - - - - - - - - - - - - Y2_Tnp,Zn_Tnp_IS91 k59_1775_1 643867.Ftrac_1959 2.98e-116 342.0 COG4974@1|root,COG4974@2|Bacteria,4NGB5@976|Bacteroidetes,47PJP@768503|Cytophagia 976|Bacteroidetes L Phage integrase family - - - - - - - - - - - - Phage_int_SAM_4,Phage_integrase k59_1775_2 616991.JPOO01000003_gene2234 1.69e-38 139.0 COG0517@1|root,COG0517@2|Bacteria,4NHKP@976|Bacteroidetes,1HYR8@117743|Flavobacteriia,23FUA@178469|Arenibacter 976|Bacteroidetes S Putative transposase - - - - - - - - - - - - Y2_Tnp,Zn_Tnp_IS91 k59_1305_1 1266925.JHVX01000011_gene1540 1.41e-56 177.0 COG3293@1|root,COG3293@2|Bacteria,1N0VW@1224|Proteobacteria,2WEPA@28216|Betaproteobacteria,3732J@32003|Nitrosomonadales 28216|Betaproteobacteria L COGs COG3293 - - - - - - - - - - - - DUF4096 k59_982_1 6087.XP_004207470.1 6.8e-76 256.0 2CNBX@1|root,2QV3V@2759|Eukaryota,39W09@33154|Opisthokonta,3BH5J@33208|Metazoa 33208|Metazoa - - - - - - - - - - - - - - - k59_709_1 261292.Nit79A3_2501 4.31e-69 219.0 COG2801@1|root,COG2801@2|Bacteria,1MVXQ@1224|Proteobacteria,2VHC7@28216|Betaproteobacteria,374M1@32003|Nitrosomonadales 28216|Betaproteobacteria L PFAM Integrase, catalytic core - - - ko:K07497 - - - - ko00000 - - - HTH_21,rve k59_519_2 317619.ANKN01000046_gene1049 4.28e-88 280.0 COG2433@1|root,COG2433@2|Bacteria,1G2BH@1117|Cyanobacteria 1117|Cyanobacteria P PFAM transposase IS66 - - - ko:K07484 - - - - ko00000 - - - DDE_Tnp_IS66,zf-IS66 k59_1859_1 237368.SCABRO_03785 4.33e-116 345.0 COG3385@1|root,COG3385@2|Bacteria,2IZDT@203682|Planctomycetes 203682|Planctomycetes L Transposase IS4 family - - - - - - - - - - - - DDE_Tnp_1 k59_997_1 7739.XP_002590018.1 1.1e-23 99.8 2D0S2@1|root,2SF6P@2759|Eukaryota 2759|Eukaryota - - - - - - - - - - - - - - - k59_261_1 1168065.DOK_05745 9.15e-95 287.0 COG3385@1|root,COG3385@2|Bacteria,1PMXF@1224|Proteobacteria,1RMHK@1236|Gammaproteobacteria,1J8NX@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria L Domain of unknown function (DUF4372) - - - - - - - - - - - - DDE_Tnp_1,DUF4372 k59_2052_1 909943.HIMB100_00010130 0.00078 47.8 COG2373@1|root,COG2373@2|Bacteria,1QV7E@1224|Proteobacteria,2TZ6T@28211|Alphaproteobacteria 28211|Alphaproteobacteria G TIGRFAM Outer membrane protein - - - - - - - - - - - - - k59_129_1 13249.RPRC004498-PA 5.63e-83 262.0 2CNBX@1|root,2QV3V@2759|Eukaryota,39W09@33154|Opisthokonta,3BH5J@33208|Metazoa,3E62V@33213|Bilateria,42B7K@6656|Arthropoda,3T0MX@50557|Insecta,3EEBZ@33342|Paraneoptera 33208|Metazoa - - - - - - - - - - - - - - - k59_1939_1 1121012.AUKX01000076_gene10 1.03e-130 378.0 COG3677@1|root,COG3677@2|Bacteria,4NHKN@976|Bacteroidetes,1HYYU@117743|Flavobacteriia,23IHD@178469|Arenibacter 976|Bacteroidetes L ISXO2-like transposase domain - - - - - - - - - - - - DDE_Tnp_IS1595,Zn_Tnp_IS1595 k59_532_2 4113.PGSC0003DMT400089859 2.18e-24 100.0 2CYIR@1|root,2S4NT@2759|Eukaryota,37W8S@33090|Viridiplantae,3GKMR@35493|Streptophyta,44UTW@71274|asterids 35493|Streptophyta S Conserved gene of - - - - - - - - - - - - - k59_532_3 225117.XP_009341690.1 1.99e-86 259.0 KOG4853@1|root,KOG4853@2759|Eukaryota,37VMJ@33090|Viridiplantae,3GJ4H@35493|Streptophyta 35493|Streptophyta S mitotic sister chromatid biorientation - - - - - - - - - - - - - k59_1873_1 994479.GL877878_gene3083 2.1e-17 89.7 COG4467@1|root,COG4467@2|Bacteria,2IDK7@201174|Actinobacteria 201174|Actinobacteria S Transposase IS66 family - - - - - - - - - - - - DDE_Tnp_IS66,zf-IS66 ## 27 queries scanned ## Total time (seconds): 74.46763706207275 ## Rate: 0.36 q/s