## Sat Jan  4 03:59:30 2025
## emapper-2.1.12
## /data/home/zhuyingjie/miniforge3/envs/eggnog/bin/emapper.py -i /data/home/zhuyingjie/01_Project/01_metagenome/mangrove/mmseqs_cluster/PRJNA629394/SRR11734664/SRR11734664_p_cluster_rep_seq.fasta --output PRJNA629394_SRR11734664 --data_dir /data/software/eggnog_database -m diamond --sensmode fast --output_dir /data/home/zhuyingjie/01_Project/01_metagenome/mangrove/annotation --temp_dir /data/software/eggnog_database/temp --excel --dbmem --cpu 24
##
#query	seed_ortholog	evalue	score	eggNOG_OGs	max_annot_lvl	COG_category	Description	Preferred_name	GOs	EC	KEGG_ko	KEGG_Pathway	KEGG_Module	KEGG_Reaction	KEGG_rclass	BRITE	KEGG_TC	CAZy	BiGG_Reaction	PFAMs
k59_5890_1	1443665.JACA01000003_gene594	9.03e-08	58.9	COG1520@1|root,COG2866@1|root,COG2931@1|root,COG3209@1|root,COG3210@1|root,COG3391@1|root,COG4886@1|root,COG1520@2|Bacteria,COG2866@2|Bacteria,COG2931@2|Bacteria,COG3209@2|Bacteria,COG3210@2|Bacteria,COG3391@2|Bacteria,COG4886@2|Bacteria,4PKBQ@976|Bacteroidetes,1IJ7S@117743|Flavobacteriia	976|Bacteroidetes	M	SPTR CHU large protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF5011,HYR,SprB
k59_6522_1	504472.Slin_2662	3.05e-74	234.0	COG2801@1|root,COG2963@1|root,COG2801@2|Bacteria,COG2963@2|Bacteria,4NJ32@976|Bacteroidetes,47TE9@768503|Cytophagia	976|Bacteroidetes	L	PFAM Integrase catalytic region	-	-	-	-	-	-	-	-	-	-	-	-	HTH_32,rve,rve_3
k59_2544_1	1219072.VHA01S_017_00110	9.69e-35	135.0	COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,1RQRP@1236|Gammaproteobacteria,1XWE9@135623|Vibrionales	135623|Vibrionales	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
k59_6569_1	1121875.KB907553_gene20	9.46e-35	134.0	COG5361@1|root,COG5361@2|Bacteria,4NKSK@976|Bacteroidetes,1IARY@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1254)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1214,DUF1254
k59_6157_2	279530.Q6IWR5_9CAUD	1.83e-11	66.2	4QGI0@10239|Viruses,4QZBH@35237|dsDNA viruses  no RNA stage,4QRQY@28883|Caudovirales,4QHZ1@10662|Myoviridae	10662|Myoviridae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
k59_4884_1	1278307.KB906994_gene2863	7.71e-39	143.0	COG3547@1|root,COG3547@2|Bacteria,1NGR7@1224|Proteobacteria,1RMF9@1236|Gammaproteobacteria,2QJ5B@267894|Psychromonadaceae	1236|Gammaproteobacteria	L	COG3547 Transposase and inactivated derivatives	-	-	-	-	-	-	-	-	-	-	-	-	DEDD_Tnp_IS110,Transposase_20
k59_1108_1	648017.C5I674_9VIRU	1.51e-20	105.0	4QAK6@10239|Viruses,4QUP9@35237|dsDNA viruses  no RNA stage	10239|Viruses	S	N-acetylmuramoyl-L-alanine amidase activity	-	GO:0008150,GO:0016032,GO:0019058,GO:0019068,GO:0044403,GO:0044409,GO:0044411,GO:0044419,GO:0051701,GO:0051704,GO:0051828,GO:0051830,GO:0085027,GO:0098003	-	-	-	-	-	-	-	-	-	-	-
k59_2166_1	240292.Ava_1611	2.38e-61	213.0	COG1020@1|root,COG1020@2|Bacteria,1G0XE@1117|Cyanobacteria,1HKNU@1161|Nostocales	1117|Cyanobacteria	Q	TIGRFAM amino acid adenylation domain	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding
k59_477_1	667121.ET1_05_01130	2.22e-31	126.0	COG5525@1|root,COG5525@2|Bacteria,1MVS3@1224|Proteobacteria,1RRH5@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Terminase	-	-	3.1.21.4	ko:K21512	-	-	-	-	ko00000,ko01000	-	-	-	Terminase_GpA
k59_5906_1	1397528.Q671_14960	6.59e-41	149.0	COG3677@1|root,COG3677@2|Bacteria,1NUTK@1224|Proteobacteria,1S11R@1236|Gammaproteobacteria,1XS39@135619|Oceanospirillales	135619|Oceanospirillales	L	ISXO2-like transposase domain	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_IS1595,Zn_Tnp_IS1595
k59_3405_1	234267.Acid_6069	1.84e-104	310.0	COG2801@1|root,COG2801@2|Bacteria	2|Bacteria	L	transposition	-	-	-	-	-	-	-	-	-	-	-	-	HTH_21,rve,rve_3
k59_3672_1	436308.Nmar_1698	3.72e-92	283.0	COG0004@1|root,arCOG04397@2157|Archaea,41SY0@651137|Thaumarchaeota	651137|Thaumarchaeota	P	Ammonium Transporter	-	-	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	-	Ammonium_transp
k59_4091_1	177437.HRM2_39480	1.09e-05	52.0	COG3385@1|root,COG3385@2|Bacteria,1RM2A@1224|Proteobacteria,42WE3@68525|delta/epsilon subdivisions,2X6QW@28221|Deltaproteobacteria,2MN97@213118|Desulfobacterales	28221|Deltaproteobacteria	L	Transposase DDE domain group 1	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1_4
k59_723_1	485915.Dret_2002	1.96e-78	246.0	COG3464@1|root,COG3464@2|Bacteria,1R4DH@1224|Proteobacteria,43AQ4@68525|delta/epsilon subdivisions,2X63W@28221|Deltaproteobacteria,2MGXP@213115|Desulfovibrionales	28221|Deltaproteobacteria	L	PFAM transposase IS204 IS1001 IS1096 IS1165 family protein	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_ISL3,zf-ISL3
k59_6607_2	1121918.ARWE01000001_gene768	4.86e-71	216.0	2AD4I@1|root,312T1@2|Bacteria,1N5RA@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
k59_6607_3	1244869.H261_03253	1.11e-11	66.6	COG4397@1|root,COG4397@2|Bacteria,1MWX8@1224|Proteobacteria,2U0B4@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Mu-like prophage major head subunit gpT	-	-	-	-	-	-	-	-	-	-	-	-	Mu-like_gpT
k59_5138_1	1121912.AUHD01000026_gene310	4.28e-46	164.0	COG3344@1|root,COG3344@2|Bacteria,4NHMS@976|Bacteroidetes,1HZPH@117743|Flavobacteriia	976|Bacteroidetes	L	reverse transcriptase	-	-	-	-	-	-	-	-	-	-	-	-	GIIM,RVT_1
k59_3052_1	1450525.JATV01000004_gene247	1.29e-27	115.0	COG1574@1|root,COG1574@2|Bacteria,4P29B@976|Bacteroidetes,1I7KZ@117743|Flavobacteriia,2NYGC@237|Flavobacterium	976|Bacteroidetes	S	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
k59_4354_1	1535422.ND16A_0740	4.24e-92	283.0	COG3119@1|root,COG3119@2|Bacteria,1MUJH@1224|Proteobacteria,1RN2V@1236|Gammaproteobacteria,2Q7EB@267889|Colwelliaceae	1236|Gammaproteobacteria	P	PFAM sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
k59_6214_1	1121912.AUHD01000011_gene696	5.63e-08	62.0	COG1061@1|root,COG1061@2|Bacteria,4NECV@976|Bacteroidetes,1HWX1@117743|Flavobacteriia	976|Bacteroidetes	L	type III restriction enzyme, res subunit	-	-	-	-	-	-	-	-	-	-	-	-	Helicase_C,ResIII
k59_6219_2	1126627.BAWE01000004_gene4269	1.65e-67	218.0	COG4397@1|root,COG4397@2|Bacteria,1MWX8@1224|Proteobacteria,2U0B4@28211|Alphaproteobacteria,3K5FC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Mu-like prophage major head subunit gpT	-	-	-	-	-	-	-	-	-	-	-	-	Mu-like_gpT
k59_4374_1	870967.VIS19158_02350	7.93e-45	163.0	COG1574@1|root,COG1574@2|Bacteria,1MWP2@1224|Proteobacteria,1RNB7@1236|Gammaproteobacteria,1XTUF@135623|Vibrionales	135623|Vibrionales	S	metal-dependent hydrolase with the TIM-barrel fold	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
k59_6223_1	1247024.JRLH01000006_gene2667	1.99e-08	55.8	2AHMX@1|root,317ZV@2|Bacteria,1PZIR@1224|Proteobacteria,1SU9H@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
k59_3340_1	1145276.T479_12525	1.1e-35	138.0	COG5511@1|root,COG5511@2|Bacteria,1TQ8B@1239|Firmicutes,4HCQE@91061|Bacilli,3IZA3@400634|Lysinibacillus	91061|Bacilli	S	Phage portal protein, lambda family	-	-	-	-	-	-	-	-	-	-	-	-	Phage_portal_2
k59_2088_1	760192.Halhy_5172	7.19e-09	62.0	COG3210@1|root,COG3210@2|Bacteria,4PMJA@976|Bacteroidetes	976|Bacteroidetes	U	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
k59_2646_2	1264700.L0MYI2_9CAUD	1.38e-33	131.0	4QB5I@10239|Viruses,4QUT2@35237|dsDNA viruses  no RNA stage,4QPQ9@28883|Caudovirales,4QI9F@10662|Myoviridae	10662|Myoviridae	S	Type III restriction enzyme, res subunit	-	-	-	-	-	-	-	-	-	-	-	-	-
k59_372_2	439235.Dalk_4509	3.83e-31	118.0	COG3677@1|root,COG3677@2|Bacteria,1MXYX@1224|Proteobacteria,434AT@68525|delta/epsilon subdivisions,2X9GM@28221|Deltaproteobacteria,2MNQ4@213118|Desulfobacterales	28221|Deltaproteobacteria	L	ISXO2-like transposase domain	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_IS1595,Zn_Tnp_IS1595
k59_4202_1	323850.Shew_0927	1.08e-68	227.0	COG1574@1|root,COG1574@2|Bacteria,1MWP2@1224|Proteobacteria,1RNB7@1236|Gammaproteobacteria,2Q9PB@267890|Shewanellaceae	1236|Gammaproteobacteria	S	PFAM Amidohydrolase 3	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
k59_2912_1	28229.ND2E_2945	1.76e-69	229.0	COG1228@1|root,COG3746@1|root,COG1228@2|Bacteria,COG3746@2|Bacteria	2|Bacteria	Q	imidazolonepropionase activity	-	-	-	ko:K07221	-	-	-	-	ko00000,ko02000	1.B.5.1	-	-	Amidohydro_1,Porin_O_P
k59_1825_1	644282.Deba_2031	1.4e-116	346.0	COG3049@1|root,COG3049@2|Bacteria,1MWPQ@1224|Proteobacteria,42QQ7@68525|delta/epsilon subdivisions,2WN8Z@28221|Deltaproteobacteria	28221|Deltaproteobacteria	M	Linear amide C-N hydrolases, choloylglycine hydrolase family	-	-	3.5.1.24	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	-	R02797,R03975,R03977,R04486,R04487,R05835	RC00090,RC00096	ko00000,ko00001,ko01000	-	-	-	CBAH
k59_5012_1	1267535.KB906767_gene4242	2.2e-26	101.0	COG2801@1|root,COG2801@2|Bacteria	2|Bacteria	L	transposition	-	-	-	ko:K07497	-	-	-	-	ko00000	-	-	-	rve_2
k59_5012_2	234267.Acid_6861	1.66e-42	142.0	COG2963@1|root,COG2963@2|Bacteria	2|Bacteria	L	transposase activity	-	-	-	ko:K07483,ko:K07497	-	-	-	-	ko00000	-	-	-	HTH_Tnp_1
k59_5834_1	1028806.GGE_1985	3.16e-19	92.4	COG3567@1|root,COG3567@2|Bacteria,1QNPU@1224|Proteobacteria,1T0PY@1236|Gammaproteobacteria,1Y9IQ@135625|Pasteurellales	135625|Pasteurellales	S	Protein of unknown function (DUF1073)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1073
k59_1191_1	1038860.AXAP01000029_gene733	7.05e-09	62.8	COG5525@1|root,COG5525@2|Bacteria,1MVS3@1224|Proteobacteria,2TRW8@28211|Alphaproteobacteria,3JTDT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phage terminase large subunit (GpA)	-	-	-	-	-	-	-	-	-	-	-	-	Terminase_GpA
k59_3137_1	1382304.JNIL01000001_gene2984	5.68e-10	58.9	COG2801@1|root,COG2801@2|Bacteria	2|Bacteria	L	transposition	-	-	-	ko:K07497	-	-	-	-	ko00000	-	-	-	-
k59_6696_1	886377.Murru_1897	6.78e-20	96.7	COG1361@1|root,COG2911@1|root,COG1361@2|Bacteria,COG2911@2|Bacteria,4NG16@976|Bacteroidetes,1HY10@117743|Flavobacteriia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Calx-beta,DUF11,SdrD_B
k59_1866_1	160492.XF_1570	1.94e-32	122.0	COG5362@1|root,COG5362@2|Bacteria,1NKZK@1224|Proteobacteria,1S0WX@1236|Gammaproteobacteria,1X6RK@135614|Xanthomonadales	135614|Xanthomonadales	S	to GI 3249594 (percent identity 29 query alignment coverage 89.6 subject alignment coverage 35.0 )	-	-	-	-	-	-	-	-	-	-	-	-	Terminase_6C
k59_5652_1	315456.RF_1137	1.09e-34	132.0	COG3049@1|root,COG3049@2|Bacteria,1MWPQ@1224|Proteobacteria,2TTPI@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	Choloylglycine hydrolase	-	-	3.5.1.24	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	-	R02797,R03975,R03977,R04486,R04487,R05835	RC00090,RC00096	ko00000,ko00001,ko01000	-	-	-	CBAH
k59_1240_1	443598.AUFA01000135_gene4723	4.81e-30	118.0	COG3547@1|root,COG3547@2|Bacteria,1Q4TE@1224|Proteobacteria,2TT7C@28211|Alphaproteobacteria,3JUK3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	DEDD_Tnp_IS110,Transposase_20
## 39 queries scanned
## Total time (seconds): 67.29275155067444
## Rate: 0.58 q/s