## Sat Jan 4 07:31:21 2025 ## emapper-2.1.12 ## /data/home/zhuyingjie/miniforge3/envs/eggnog/bin/emapper.py -i /data/home/zhuyingjie/01_Project/01_metagenome/mangrove/mmseqs_cluster/PRJNA629394/SRR11734716/SRR11734716_p_cluster_rep_seq.fasta --output PRJNA629394_SRR11734716 --data_dir /data/software/eggnog_database -m diamond --sensmode fast --output_dir /data/home/zhuyingjie/01_Project/01_metagenome/mangrove/annotation --temp_dir /data/software/eggnog_database/temp --excel --dbmem --cpu 24 ## #query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs k59_448_1 1121403.AUCV01000124_gene2974 9.97e-32 133.0 COG2433@1|root,COG2433@2|Bacteria,1RE5Q@1224|Proteobacteria,42WSA@68525|delta/epsilon subdivisions,2WRPQ@28221|Deltaproteobacteria,2MMJ3@213118|Desulfobacterales 28221|Deltaproteobacteria S Transposase IS66 family - - - ko:K07484 - - - - ko00000 - - - DDE_Tnp_IS66,zf-IS66 k59_1725_1 1121012.AUKX01000076_gene10 3.74e-138 397.0 COG3677@1|root,COG3677@2|Bacteria,4NHKN@976|Bacteroidetes,1HYYU@117743|Flavobacteriia,23IHD@178469|Arenibacter 976|Bacteroidetes L ISXO2-like transposase domain - - - - - - - - - - - - DDE_Tnp_IS1595,Zn_Tnp_IS1595 k59_1290_1 234267.Acid_6861 6.78e-50 161.0 COG2963@1|root,COG2963@2|Bacteria 2|Bacteria L transposase activity - - - ko:K07483,ko:K07497 - - - - ko00000 - - - HTH_Tnp_1 k59_1290_2 1267535.KB906767_gene4242 2.88e-26 100.0 COG2801@1|root,COG2801@2|Bacteria 2|Bacteria L transposition - - - ko:K07497 - - - - ko00000 - - - rve_2 k59_1398_1 1288963.ADIS_4707 8.62e-80 249.0 COG3344@1|root,COG3344@2|Bacteria,4NHMS@976|Bacteroidetes,47MYV@768503|Cytophagia 976|Bacteroidetes L Reverse transcriptase (RNA-dependent DNA polymerase) - - 2.7.7.49 ko:K00986 - - - - ko00000,ko01000 - - - GIIM,RVT_1 k59_517_1 3712.Bo2g139190.1 5.82e-13 71.6 KOG4853@1|root,KOG4853@2759|Eukaryota,37VMJ@33090|Viridiplantae,3GJ4H@35493|Streptophyta 35493|Streptophyta S mitotic sister chromatid biorientation - - - - - - - - - - - - - k59_76_1 616991.JPOO01000003_gene2234 5.79e-93 281.0 COG0517@1|root,COG0517@2|Bacteria,4NHKP@976|Bacteroidetes,1HYR8@117743|Flavobacteriia,23FUA@178469|Arenibacter 976|Bacteroidetes S Putative transposase - - - - - - - - - - - - Y2_Tnp,Zn_Tnp_IS91 k59_1468_1 1236000.L0AR07_9CAUD 4.3e-33 125.0 4QAMU@10239|Viruses,4QV4U@35237|dsDNA viruses no RNA stage,4QPEV@28883|Caudovirales,4QI0J@10662|Myoviridae 10662|Myoviridae S Baseplate J-like protein - GO:0005575,GO:0019012,GO:0044423,GO:0098015,GO:0098025 - - - - - - - - - - - k59_1468_2 551895.B5AX79_9CAUD 1.4e-35 125.0 4QDYV@10239|Viruses,4QWVE@35237|dsDNA viruses no RNA stage,4QQRM@28883|Caudovirales,4QJ7K@10662|Myoviridae 10662|Myoviridae - - - - - - - - - - - - - - - k59_1733_2 370438.PTH_2468 3.26e-93 293.0 COG3344@1|root,COG3344@2|Bacteria,1TP9A@1239|Firmicutes,248M4@186801|Clostridia,2607J@186807|Peptococcaceae 186801|Clostridia L Similarity to COG3344 Retron-type reverse transcriptase(Evalue - - 2.7.7.49 ko:K00986 - - - - ko00000,ko01000 - - - GIIM,RVT_1 k59_982_1 3712.Bo00616s160.1 1.05e-19 89.7 2D0S2@1|root,2SF6P@2759|Eukaryota 2759|Eukaryota - - - - - - - - - - - - - - - k59_1734_1 1227266.HMPREF1551_00356 1.12e-108 320.0 COG3039@1|root,COG3039@2|Bacteria,4NGY9@976|Bacteroidetes,1I0T1@117743|Flavobacteriia,1ESPR@1016|Capnocytophaga 976|Bacteroidetes L Transposase DDE domain - - - - - - - - - - - - DDE_Tnp_1_3 k59_1088_1 1042209.HK44_020915 1.25e-47 155.0 COG3436@1|root,COG3436@2|Bacteria,1RHJ1@1224|Proteobacteria,1S5UN@1236|Gammaproteobacteria,1YQJU@136843|Pseudomonas fluorescens group 1236|Gammaproteobacteria L transposase - - - ko:K07484 - - - - ko00000 - - - TnpB_IS66 k59_1088_2 977880.pRALTA_0521 5.48e-08 54.7 COG2963@1|root,COG2963@2|Bacteria,1NH66@1224|Proteobacteria,2WCAH@28216|Betaproteobacteria,1K7FA@119060|Burkholderiaceae 28216|Betaproteobacteria L Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - ko:K07483 - - - - ko00000 - - - HTH_Tnp_1 k59_1142_1 317619.ANKN01000046_gene1049 1.49e-28 116.0 COG2433@1|root,COG2433@2|Bacteria,1G2BH@1117|Cyanobacteria 1117|Cyanobacteria P PFAM transposase IS66 - - - ko:K07484 - - - - ko00000 - - - DDE_Tnp_IS66,zf-IS66 k59_1694_1 1046724.KB889834_gene1048 6.5e-09 62.8 COG3385@1|root,COG3385@2|Bacteria,1MVRM@1224|Proteobacteria,1RRFT@1236|Gammaproteobacteria,464GA@72275|Alteromonadaceae 1236|Gammaproteobacteria L COG3385 FOG Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,Nterm_IS4 k59_662_1 225117.XP_009366572.1 9.89e-10 60.5 2CV7H@1|root,2RRGK@2759|Eukaryota,383A9@33090|Viridiplantae,3GS0R@35493|Streptophyta 35493|Streptophyta - - - - - - - - - - - - - - - k59_588_1 551895.B5AX38_9CAUD 5.96e-32 124.0 4QC8M@10239|Viruses,4QWMX@35237|dsDNA viruses no RNA stage,4QQU8@28883|Caudovirales,4QIAN@10662|Myoviridae 10662|Myoviridae S Protein of unknown function (DUF1073) - - - - - - - - - - - - - k59_927_1 349161.Dred_0300 8.73e-122 374.0 COG4584@1|root,COG4584@2|Bacteria,1UW0T@1239|Firmicutes,24AQA@186801|Clostridia,261N3@186807|Peptococcaceae 186801|Clostridia L PFAM integrase - - - - - - - - - - - - HTH_23,rve k59_927_2 1347393.HG726019_gene7867 1.14e-99 298.0 COG1484@1|root,COG1484@2|Bacteria,4NM7S@976|Bacteroidetes,2FQJH@200643|Bacteroidia,4AWBX@815|Bacteroidaceae 976|Bacteroidetes L IstB-like ATP binding protein - - - - - - - - - - - - IstB_IS21 k59_868_1 3750.XP_008349640.1 3.21e-05 45.1 COG2801@1|root,KOG1192@1|root,KOG0017@2759|Eukaryota,KOG1192@2759|Eukaryota,37RRH@33090|Viridiplantae,3G8MV@35493|Streptophyta,4JM10@91835|fabids 35493|Streptophyta H transposition, RNA-mediated - - - - - - - - - - - - Asp_protease_2,Chromo,RVP_2,RVT_1,Retrotrans_gag,gag-asp_proteas,rve k59_1599_1 880070.Cycma_4947 6.7e-31 126.0 COG3385@1|root,COG3385@2|Bacteria,4NQCC@976|Bacteroidetes,47RFB@768503|Cytophagia 976|Bacteroidetes L PFAM Transposase DDE domain - - - - - - - - - - - - DDE_Tnp_1 k59_483_1 225117.XP_009341690.1 2.02e-76 233.0 KOG4853@1|root,KOG4853@2759|Eukaryota,37VMJ@33090|Viridiplantae,3GJ4H@35493|Streptophyta 35493|Streptophyta S mitotic sister chromatid biorientation - - - - - - - - - - - - - k59_1609_1 10689.H9C0D7_BPCPT 9.07e-36 132.0 4QC5Z@10239|Viruses,4QUNP@35237|dsDNA viruses no RNA stage,4QPGX@28883|Caudovirales,4QJ8M@10662|Myoviridae 10662|Myoviridae S Phage Mu protein F like protein - - - - - - - - - - - - - k59_382_1 13249.RPRC004498-PA 1.54e-94 292.0 2CNBX@1|root,2QV3V@2759|Eukaryota,39W09@33154|Opisthokonta,3BH5J@33208|Metazoa,3E62V@33213|Bilateria,42B7K@6656|Arthropoda,3T0MX@50557|Insecta,3EEBZ@33342|Paraneoptera 33208|Metazoa - - - - - - - - - - - - - - - k59_50_1 398767.Glov_3426 2.87e-105 318.0 COG3385@1|root,COG3385@2|Bacteria,1REZ3@1224|Proteobacteria,42RPA@68525|delta/epsilon subdivisions,2WNFF@28221|Deltaproteobacteria 28221|Deltaproteobacteria L PFAM transposase, IS4 family protein - - - - - - - - - - - - DDE_Tnp_1 k59_489_1 886377.Murru_1897 4.15e-20 97.1 COG1361@1|root,COG2911@1|root,COG1361@2|Bacteria,COG2911@2|Bacteria,4NG16@976|Bacteroidetes,1HY10@117743|Flavobacteriia 976|Bacteroidetes M C-terminal domain of CHU protein family - - - - - - - - - - - - CHU_C,Calx-beta,DUF11,SdrD_B k59_1376_1 1127518.H9C130_9CAUD 2.08e-59 196.0 4QAYT@10239|Viruses,4QVA1@35237|dsDNA viruses no RNA stage,4QPXH@28883|Caudovirales,4QI47@10662|Myoviridae 10662|Myoviridae S Protein of unknown function (DUF3383) - - - - - - - - - - - - - ## 28 queries scanned ## Total time (seconds): 66.41691756248474 ## Rate: 0.42 q/s