name	taxonomy_id	taxonomy_lvl	kraken_assigned_reads	added_reads	new_est_reads	fraction_total_reads
Pseudomonas fluorescens	294	S	49	85	134	0.00480
Pseudomonas aeruginosa	287	S	57	1544	1601	0.05730
Pseudomonas putida	303	S	65	1556	1621	0.05801
Stutzerimonas stutzeri	316	S	55	266	321	0.01149
Candidatus Thiodiazotropha sp. CDECU1	3065865	S	564	66	630	0.02255
Sedimenticola selenatireducens	191960	S	65	15	80	0.00286
Sedimenticola thiotaurini	1543721	S	47	12	59	0.00211
Thiosocius teredinicola	1973002	S	82	11	93	0.00333
Candidatus Endoriftia persephone	393765	S	75	34	109	0.00390
Thiolapillus brandeum	1076588	S	46	4	50	0.00179
Thiorhodovibrio litoralis	2952932	S	38	11	49	0.00175
Thiocapsa bogorovii	521689	S	41	13	54	0.00193
Thiocapsa sp.	2024551	S	37	11	48	0.00172
Marichromatium purpuratum	37487	S	55	44	99	0.00354
Candidatus Thiodictyon syntrophicum	1166950	S	50	11	61	0.00218
Thioflavicoccus mobilis	80679	S	49	18	67	0.00240
Thiocystis violascens	73141	S	41	16	57	0.00204
Thioalkalivibrio sulfidiphilus	1033854	S	43	246	289	0.01034
Spiribacter halobius	2182432	S	35	14	49	0.00175
Sulfuriflexus mobilis	1811807	S	62	8	70	0.00251
Vibrio sp. THAF190c	2587865	S	36	59	95	0.00340
Vibrio parahaemolyticus	670	S	33	70	103	0.00369
Vibrio owensii	696485	S	33	143	176	0.00630
Vibrio coralliirubri	1516159	S	87	221	308	0.01102
Vibrio crassostreae	246167	S	83	188	271	0.00970
Vibrio hyugaensis	1534743	S	49	130	179	0.00641
Vibrio chagasii	170679	S	40	60	100	0.00358
Vibrio fortis	212667	S	33	48	81	0.00290
Photobacterium sp. DA100	3027472	S	64	106	170	0.00608
Photobacterium sp. TY1-4	2899122	S	37	65	102	0.00365
Photobacterium profundum	74109	S	65	64	129	0.00462
Photobacterium damselae	38293	S	43	173	216	0.00773
Stenotrophomonas maltophilia	40324	S	52	474	526	0.01882
Psychromonas ingrahamii	357794	S	43	51	94	0.00336
Thiohalobacter sp. IOR34	3057176	S	95	114	209	0.00748
Sulfuricaulis limicola	1620215	S	37	9	46	0.00165
Woeseia oceani	1548547	S	60	4	64	0.00229
endosymbiont of unidentified scaly snail isolate Monju	1248727	S	47	15	62	0.00222
Bradyrhizobium erythrophlei	1437360	S	33	280	313	0.01120
Rhodopseudomonas palustris	1076	S	60	253	313	0.01120
Rhizobium leguminosarum	384	S	33	264	297	0.01063
Agrobacterium tumefaciens	358	S	48	278	326	0.01167
Sinorhizobium fredii	380	S	32	302	334	0.01195
uncultured Roseibium sp.	1936171	S	55	136	191	0.00684
Anderseniella sp. Alg231-50	1922226	S	112	56	168	0.00601
uncultured Cohaesibacter sp.	1002546	S	73	100	173	0.00619
Nisaea acidiphila	1862145	S	37	77	114	0.00408
Thalassobaculum sp. OXR-137	3100173	S	34	181	215	0.00769
Caulobacter segnis	88688	S	34	106	140	0.00501
Cupriavidus taiwanensis	164546	S	54	312	366	0.01310
Variovorax paradoxus	34073	S	63	347	410	0.01467
Achromobacter xylosoxidans	85698	S	32	417	449	0.01607
Sulfurimicrobium lacus	2715678	S	37	74	111	0.00397
Streptomyces venezuelae	54571	S	67	1495	1562	0.05590
Streptomyces niveus	193462	S	38	583	621	0.02222
Streptomyces formicae	1616117	S	34	641	675	0.02416
Actinoplanes sp. L3-i22	2836373	S	36	232	268	0.00959
Actinoplanes sichuanensis	512349	S	33	124	157	0.00562
Dactylosporangium sp. AC04546	2862460	S	34	178	212	0.00759
Dactylosporangium sp. NBC_01737	2975959	S	33	170	203	0.00727
Dactylosporangium aurantiacum	35754	S	40	275	315	0.01127
Polymorphospora rubra	338584	S	35	252	287	0.01027
Catellatospora sp. IY07-71	2728827	S	33	295	328	0.01174
Nonomuraea sp. NBC_01738	2976003	S	32	223	255	0.00913
[Actinomadura] parvosata	1955412	S	44	336	380	0.01360
Actinoallomurus sp. NBC_01490	2903557	S	39	282	321	0.01149
Iamia sp. SCSIO 61187	2722752	S	37	40	77	0.00276
Iamia majanohamensis	467976	S	35	43	78	0.00279
Dermatobacter hominis	2884263	S	36	43	79	0.00283
Aquihabitans sp. G128	2849779	S	34	46	80	0.00286
Actinomarinicola tropica	2789776	S	32	43	75	0.00268
Ilumatobacter coccineus	467094	S	49	16	65	0.00233
Clostridium botulinum	1491	S	50	191	241	0.00863
Oceanirhabdus sp. W0125-5	2999116	S	43	69	112	0.00401
uncultured Desulfosarcina sp.	218289	S	438	5000	5438	0.19462
Desulfosarcina alkanivorans	571177	S	268	237	505	0.01807
Desulfosarcina ovata	83564	S	267	23	290	0.01038
Desulfosarcina widdelii	947919	S	155	58	213	0.00762
Desulfosarcina sp. BuS5	933262	S	101	5	106	0.00379
uncultured Desulfobacter sp.	240139	S	204	68	272	0.00973
Desulfobacula toluolica	28223	S	56	7	63	0.00225
Desulforapulum autotrophicum	2296	S	40	8	48	0.00172
Desulfonema magnum	45655	S	98	3	101	0.00361
Desulfonema limicola	45656	S	37	5	42	0.00150
Desulfococcus multivorans	897	S	64	55	119	0.00426
Desulfosudis oleivorans	181663	S	57	5	62	0.00222
Desulfatibacillum aliphaticivorans	218208	S	48	2	50	0.00179
Desulfoluna limicola	2810562	S	33	3	36	0.00129
Maridesulfovibrio sp.	2795000	S	41	61	102	0.00365
uncultured Desulfobulbus sp.	239745	S	52	37	89	0.00319
Desulfolithobacter dissulfuricans	2795293	S	37	11	48	0.00172
Desulfoferula mesophila	3058419	S	49	5	54	0.00193
Desulfoglaeba alkanexedens	361111	S	44	5	49	0.00175
uncultured Draconibacterium sp.	1573823	S	52	126	178	0.00637
Stieleria maiorica	2795974	S	48	37	85	0.00304
Stieleria neptunia	2527979	S	39	12	51	0.00183
Stieleria varia	2528005	S	36	5	41	0.00147
Roseimaritima ulvae	980254	S	37	7	44	0.00157
Lignipirellula cremea	2528010	S	48	29	77	0.00276
Pirellulimonas nuda	2528009	S	38	13	51	0.00183
Maioricimonas rarisocia	2528026	S	41	16	57	0.00204
Tautonia plasticadhaerens	2527974	S	54	19	73	0.00261
Aquisphaera giovannonii	406548	S	45	32	77	0.00276
Limnoglobus roseus	2598579	S	33	16	49	0.00175
Anaeromyxobacter paludicola	2918171	S	33	36	69	0.00247
Archangium violaceum	83451	S	46	29	75	0.00268
Sorangium cellulosum	56	S	107	79	186	0.00666
Sandaracinus amylolyticus	927083	S	62	12	74	0.00265
Nannocystis poenicansa	2995304	S	55	9	64	0.00229
Haliangium ochraceum	80816	S	46	10	56	0.00200
Luteitalea sp. TBR-22	2802971	S	34	16	50	0.00179
Nitrosopumilus sp.	2024843	S	33	22	55	0.00197