name	taxonomy_id	taxonomy_lvl	kraken_assigned_reads	added_reads	new_est_reads	fraction_total_reads
Pseudomonas fluorescens	294	S	43	106	149	0.00692
Pseudomonas aeruginosa	287	S	41	1231	1272	0.05907
Pseudomonas putida	303	S	53	756	809	0.03757
Pseudomonas chlororaphis	587753	S	43	221	264	0.01226
Stutzerimonas stutzeri	316	S	41	238	279	0.01296
Escherichia coli	562	S	36	1741	1777	0.08253
Candidatus Thiodiazotropha sp. CDECU1	3065865	S	245	35	280	0.01300
Sedimenticola thiotaurini	1543721	S	35	10	45	0.00209
Sedimenticola selenatireducens	191960	S	33	9	42	0.00195
Thiosocius teredinicola	1973002	S	62	10	72	0.00334
Candidatus Endoriftia persephone	393765	S	43	25	68	0.00316
Thioflavicoccus mobilis	80679	S	48	20	68	0.00316
Thiocystis violascens	73141	S	35	16	51	0.00237
Candidatus Thiodictyon syntrophicum	1166950	S	34	9	43	0.00200
Thioalkalivibrio sulfidiphilus	1033854	S	34	241	275	0.01277
Sulfuriflexus mobilis	1811807	S	57	10	67	0.00311
Stenotrophomonas maltophilia	40324	S	40	407	447	0.02076
Vibrio owensii	696485	S	50	309	359	0.01667
Thiohalobacter sp. IOR34	3057176	S	50	77	127	0.00590
Woeseia oceani	1548547	S	59	5	64	0.00297
Sulfurivermis fontis	1972068	S	40	268	308	0.01430
Bradyrhizobium diazoefficiens	1355477	S	42	568	610	0.02833
Rhodopseudomonas palustris	1076	S	71	194	265	0.01231
Rhizobium leguminosarum	384	S	36	234	270	0.01254
Agrobacterium tumefaciens	358	S	39	200	239	0.01110
Sinorhizobium fredii	380	S	36	188	224	0.01040
uncultured Roseibium sp.	1936171	S	46	103	149	0.00692
Anderseniella sp. Alg231-50	1922226	S	46	15	61	0.00283
Enhydrobacter sp.	1894999	S	37	58	95	0.00441
uncultured Cohaesibacter sp.	1002546	S	67	62	129	0.00599
Salinarimonas sp.	2766526	S	32	115	147	0.00683
Azospirillum thermophilum	2202148	S	34	202	236	0.01096
Hypericibacter terrae	2602015	S	41	60	101	0.00469
Hypericibacter adhaerens	2602016	S	32	100	132	0.00613
Variovorax paradoxus	34073	S	66	570	636	0.02954
Streptomyces venezuelae	54571	S	50	2530	2580	0.11982
Iamia majanohamensis	467976	S	32	125	157	0.00729
Bacillus thuringiensis	1428	S	32	1148	1180	0.05480
Clostridium botulinum	1491	S	48	230	278	0.01291
Candidatus Promineifilum breve	1806508	S	38	15	53	0.00246
uncultured Desulfosarcina sp.	218289	S	372	3163	3535	0.16417
Desulfosarcina ovata	83564	S	247	23	270	0.01254
Desulfosarcina alkanivorans	571177	S	214	190	404	0.01876
Desulfosarcina widdelii	947919	S	139	60	199	0.00924
Desulfosarcina sp. BuS5	933262	S	81	4	85	0.00395
uncultured Desulfobacter sp.	240139	S	213	63	276	0.01282
Desulfobacula toluolica	28223	S	56	6	62	0.00288
Desulforapulum autotrophicum	2296	S	41	7	48	0.00223
Desulfonema magnum	45655	S	103	2	105	0.00488
Desulfonema limicola	45656	S	45	4	49	0.00228
Desulfococcus multivorans	897	S	64	41	105	0.00488
Desulfosudis oleivorans	181663	S	59	6	65	0.00302
Desulfatibacillum aliphaticivorans	218208	S	44	2	46	0.00214
Desulfoluna limicola	2810562	S	40	4	44	0.00204
uncultured Pseudodesulfovibrio sp.	2035858	S	40	67	107	0.00497
Geotalea uraniireducens	351604	S	34	37	71	0.00330
uncultured Desulfobulbus sp.	239745	S	53	37	90	0.00418
Desulfoglaeba alkanexedens	361111	S	40	4	44	0.00204
Syntrophobacter fumaroxidans	119484	S	36	33	69	0.00320
Desulfoferula mesophila	3058419	S	42	3	45	0.00209
uncultured Draconibacterium sp.	1573823	S	50	128	178	0.00827
Rhodocaloribacter litoris	2558931	S	32	9	41	0.00190
Stieleria neptunia	2527979	S	40	23	63	0.00293
Lignipirellula cremea	2528010	S	35	27	62	0.00288
Pirellulimonas nuda	2528009	S	42	20	62	0.00288
Urbifossiella limnaea	2528023	S	32	27	59	0.00274
Aquisphaera giovannonii	406548	S	39	42	81	0.00376
Tautonia plasticadhaerens	2527974	S	36	17	53	0.00246
Myxococcus stipitatus	83455	S	33	36	69	0.00320
Pyxidicoccus parkwaysis	2813578	S	32	16	48	0.00223
Archangium violaceum	83451	S	42	29	71	0.00330
Sorangium cellulosum	56	S	106	78	184	0.00855
Sandaracinus amylolyticus	927083	S	81	15	96	0.00446
Nannocystis poenicansa	2995304	S	47	7	54	0.00251
Haliangium ochraceum	80816	S	43	8	51	0.00237
Nitrosopumilus cobalaminigenes	1470066	S	46	11	57	0.00265
Candidatus Nitrosopumilus sediminis	1229909	S	38	9	47	0.00218
Nitrosopumilus oxyclinae	1959104	S	38	8	46	0.00214
Nitrosopumilus piranensis	1582439	S	33	12	45	0.00209