0.03 15 15 U 0 unclassified 99.97 55313 0 R 1 root 99.97 55313 0 R1 131567 cellular organisms 99.97 55313 94 D 2 Bacteria 91.58 50667 88 P 1224 Pseudomonadota 62.02 34314 272 C 1236 Gammaproteobacteria 57.06 31572 19 O 135614 Lysobacterales 56.61 31323 634 F 1775411 Rhodanobacteraceae 42.16 23326 1501 G 242605 Luteibacter 38.59 21349 21349 S 2911537 Luteibacter aegosomatis 0.60 331 331 S 2911539 Luteibacter aegosomatissinici 0.15 82 82 S 2911538 Luteibacter aegosomaticola 0.10 53 53 S 2589080 Luteibacter pinisoli 0.02 10 10 S 564369 Luteibacter anthropi 12.10 6693 1999 G 231454 Dyella 8.43 4665 9 G1 2634549 unclassified Dyella 7.13 3946 3946 S 3075430 Dyella sp. BiH032 1.04 577 577 S 3069105 Dyella sp. A6 0.24 133 133 S 2501295 Dyella sp. M7H15-1 0.05 26 26 S 445710 Dyella thiooxydans 0.00 2 2 S 522259 Dyella terrae 0.00 1 1 S 1849581 Dyella caseinilytica 0.63 350 2 G 70411 Frateuria 0.37 206 206 S 1542730 Frateuria soli 0.25 139 139 S 2898793 Frateuria edaphi 0.01 3 0 S 81475 Frateuria aurantia 0.01 3 3 S1 767434 Frateuria aurantia DSM 6220 0.54 299 4 G 75309 Rhodanobacter 0.41 227 227 S 582702 Rhodanobacter glycinis 0.12 66 4 G1 2621553 unclassified Rhodanobacter 0.11 62 62 S 3031330 Rhodanobacter sp. AS-Z3 0.00 1 1 S 416169 Rhodanobacter thiooxydans 0.00 1 1 S 666685 Rhodanobacter denitrificans 0.02 9 0 G 323413 Dokdonella 0.02 9 0 S 323415 Dokdonella koreensis 0.02 9 9 S1 1300342 Dokdonella koreensis DS-123 0.01 8 0 G 2707020 Aerosticca 0.01 8 8 S 2010829 Aerosticca soli 0.01 4 0 G 2233801 Ahniella 0.01 4 4 S 2021234 Ahniella affigens 0.42 230 35 F 32033 Lysobacteraceae 0.19 105 29 G 40323 Stenotrophomonas 0.14 75 75 S 128780 Stenotrophomonas acidaminiphila 0.00 1 0 G1 995085 Stenotrophomonas maltophilia group 0.00 1 1 S 40324 Stenotrophomonas maltophilia 0.04 20 7 G 338 Xanthomonas 0.02 12 12 S 29447 Xanthomonas albilineans 0.00 1 0 G1 643453 Xanthomonas citri group 0.00 1 0 S 346 Xanthomonas citri 0.00 1 1 S1 454594 Xanthomonas citri pv. mangiferaeindicae 0.03 17 0 G 490567 Arenimonas 0.03 17 17 S 370777 Arenimonas daejeonensis 0.03 16 8 G 68 Lysobacter 0.00 2 2 S 84531 Lysobacter antibioticus 0.00 2 2 S 1003114 Lysobacter yananisis 0.00 2 2 S 2822368 Lysobacter luteus 0.00 1 1 S 435897 Lysobacter capsici 0.00 1 0 G1 2635362 unclassified Lysobacter 0.00 1 1 S 2290922 Lysobacter sp. TY2-98 0.02 13 12 G 83618 Pseudoxanthomonas 0.00 1 0 G1 2645906 unclassified Pseudoxanthomonas 0.00 1 1 S 2995142 Pseudoxanthomonas sp. SL93 0.02 9 0 G 141948 Thermomonas 0.01 4 0 G1 2633315 unclassified Thermomonas 0.01 3 3 S 2714945 Thermomonas sp. HDW16 0.00 1 1 S 2771436 Thermomonas sp. XSG 0.00 2 2 S 2202149 Thermomonas aquatica 0.00 1 1 S 215691 Thermomonas brevis 0.00 1 1 S 1463158 Thermomonas carbonis 0.00 1 1 S 2884874 Thermomonas paludicola 0.01 8 6 G 2370 Xylella 0.00 2 1 S 2371 Xylella fastidiosa 0.00 1 1 S1 644357 Xylella fastidiosa subsp. multiplex 0.01 7 3 G 83614 Luteimonas 0.01 4 1 G1 2629088 unclassified Luteimonas 0.01 3 3 S 1896164 Luteimonas sp. JM171 1.42 788 0 O 72274 Pseudomonadales 1.27 705 0 F 2887365 Marinobacteraceae 1.27 705 675 G 2742 Marinobacter 0.05 25 17 G1 83889 unclassified Marinobacter 0.01 4 4 S 3035454 Marinobacter sp. LA51 0.00 2 2 S 1749259 Marinobacter sp. LQ44 0.00 1 1 S 1415568 Marinobacter sp. LV10R510-11A 0.00 1 1 S 2817656 Marinobacter sp. CA1 0.01 4 4 S 2603215 Marinobacter fonticola 0.00 1 0 S 2743 Marinobacter nauticus 0.00 1 1 S1 351348 Marinobacter nauticus VT8 0.15 83 20 F 135621 Pseudomonadaceae 0.10 57 23 G 286 Pseudomonas 0.02 9 0 G1 136843 Pseudomonas fluorescens group 0.01 6 0 S 47883 Pseudomonas synxantha 0.01 6 6 S1 96901 Pseudomonas synxantha BG33R 0.01 3 3 S 47878 Pseudomonas azotoformans 0.01 8 0 G1 136841 Pseudomonas aeruginosa group 0.01 8 8 S 287 Pseudomonas aeruginosa 0.01 5 0 G1 136845 Pseudomonas putida group 0.01 4 4 S 303 Pseudomonas putida 0.00 1 1 S 78327 Pseudomonas mosselii 0.01 3 3 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 2 0 G1 196821 unclassified Pseudomonas 0.00 1 1 S 2895471 Pseudomonas sp. B21-010 0.00 1 1 S 107445 Pseudomonas sp. A2 0.00 2 2 S 2961893 Pseudomonas triclosanedens 0.00 2 2 S 2219225 Pseudomonas asiatica 0.00 1 1 S 46677 Pseudomonas agarici 0.00 1 1 S 1198456 Pseudomonas guguanensis 0.00 1 1 S 2599595 Pseudomonas eucalypticola 0.01 3 0 G 2901164 Stutzerimonas 0.01 3 0 G1 136846 Stutzerimonas stutzeri group 0.00 2 2 S 74829 Stutzerimonas balearica 0.00 1 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 1 1 S 316 Stutzerimonas stutzeri 0.00 2 2 G 2901189 Halopseudomonas 0.00 1 0 G 1654787 Thiopseudomonas 0.00 1 1 S 1697053 Thiopseudomonas alkaliphila 1.25 692 26 O 91347 Enterobacterales 1.07 591 62 F 543 Enterobacteriaceae 0.29 161 0 F1 2890311 Klebsiella/Raoultella group 0.29 160 0 G 570 Klebsiella 0.26 145 144 S 573 Klebsiella pneumoniae 0.00 1 1 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.03 14 14 S 548 Klebsiella aerogenes 0.00 1 0 S 1463165 Klebsiella quasipneumoniae 0.00 1 1 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.00 1 0 G 160674 Raoultella 0.00 1 1 S 54291 Raoultella ornithinolytica 0.28 156 0 G 561 Escherichia 0.28 156 141 S 562 Escherichia coli 0.02 10 10 S1 244320 Escherichia coli O55:H7 0.01 5 5 S1 362663 Escherichia coli 536 0.23 126 6 G 590 Salmonella 0.22 119 21 S 28901 Salmonella enterica 0.18 98 11 S1 59201 Salmonella enterica subsp. enterica 0.06 34 34 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.03 15 15 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.03 14 11 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.01 3 3 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.02 10 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.01 7 7 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.00 2 2 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.00 1 1 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.01 4 4 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.01 3 3 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.00 2 2 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 2 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 2 2 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 2 2 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 1 1 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.00 1 0 S 54736 Salmonella bongori 0.00 1 1 S1 1299282 Salmonella bongori CFSAN000510 0.09 49 0 G 547 Enterobacter 0.09 48 0 G1 354276 Enterobacter cloacae complex 0.07 36 36 S 299767 Enterobacter ludwigii 0.01 8 8 S 158836 Enterobacter hormaechei 0.00 2 2 S 61645 Enterobacter asburiae 0.00 2 2 S 1812935 Enterobacter roggenkampii 0.00 1 1 S 881260 Enterobacter bugandensis 0.04 20 0 F1 191675 Enterobacteriaceae incertae sedis 0.04 20 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.03 16 0 G 472825 Candidatus Purcelliella 0.03 16 16 S 472834 Candidatus Purcelliella pentastirinorum 0.01 4 0 F3 84564 ant endosymbionts 0.01 4 0 G 203804 Candidatus Blochmanniella 0.01 4 0 G1 711328 unclassified Candidatus Blochmanniella 0.01 4 4 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.01 6 0 G 2726810 Scandinavium 0.01 6 6 S 1851514 Scandinavium goeteborgense 0.01 5 0 F1 36866 unclassified Enterobacteriaceae 0.01 5 5 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.01 3 0 G 544 Citrobacter 0.00 2 0 G1 1344959 Citrobacter freundii complex 0.00 1 1 S 67827 Citrobacter werkmanii 0.00 1 1 S 67828 Citrobacter gillenii 0.00 1 1 S 2971264 Citrobacter enshiensis 0.00 1 0 G 1048757 Candidatus Moranella 0.00 1 1 S 1048758 Candidatus Moranella endobia 0.00 1 1 G 401618 Candidatus Riesia 0.00 1 0 G 158851 Trabulsiella 0.00 1 1 S 379893 Trabulsiella odontotermitis 0.05 28 0 F 1903409 Erwiniaceae 0.04 22 0 G 551 Erwinia 0.04 21 0 G1 2622719 unclassified Erwinia 0.04 21 21 S 215689 Erwinia sp. Ejp617 0.00 1 1 S 1922217 Candidatus Erwinia haradaeae 0.01 4 0 G 32199 Buchnera 0.01 4 1 S 9 Buchnera aphidicola 0.00 2 2 S1 1965431 Buchnera aphidicola (Ceratoglyphina bambusae) 0.00 1 1 S1 1241859 Buchnera aphidicola (Hyadaphis tataricae) 0.00 2 2 G 53335 Pantoea 0.03 18 2 F 1903414 Morganellaceae 0.01 7 0 G 626 Xenorhabdus 0.01 7 0 S 40577 Xenorhabdus poinarii 0.01 7 7 S1 1354304 Xenorhabdus poinarii G6 0.01 5 0 G 581 Morganella 0.01 5 5 S 582 Morganella morganii 0.00 2 0 G 583 Proteus 0.00 2 2 S 584 Proteus mirabilis 0.00 2 0 G 637 Arsenophonus 0.00 2 2 S 638 Arsenophonus nasoniae 0.03 14 0 F 2812006 Bruguierivoracaceae 0.03 14 0 G 84565 Sodalis 0.02 9 9 S 2697027 Sodalis ligni 0.01 5 0 S 1486991 Candidatus Sodalis pierantonius 0.01 5 5 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.02 11 1 F 1903411 Yersiniaceae 0.02 9 0 G 613 Serratia 0.01 6 6 S 61652 Serratia rubidaea 0.00 2 0 S 82996 Serratia plymuthica 0.00 2 2 S1 1006598 Serratia plymuthica RVH1 0.00 1 1 S 138074 Serratia symbiotica 0.00 1 0 G 629 Yersinia 0.00 1 0 G1 1649845 Yersinia pseudotuberculosis complex 0.00 1 0 S 632 Yersinia pestis 0.00 1 1 S1 360102 Yersinia pestis Antiqua 0.01 3 0 F 1903410 Pectobacteriaceae 0.01 3 0 G 122277 Pectobacterium 0.00 1 1 S 180957 Pectobacterium brasiliense 0.00 1 1 S 1905730 Pectobacterium parmentieri 0.00 1 1 S 2485124 Pectobacterium polonicum 0.00 1 0 F 3120698 Gallaecimonadaceae 0.00 1 0 G 745410 Gallaecimonas 0.00 1 1 S 3029055 Gallaecimonas kandeliae 0.87 482 4 O 135619 Oceanospirillales 0.67 373 5 F 224372 Alcanivoracaceae 0.64 355 354 G 3020832 Alloalcanivorax 0.00 1 1 S 1094342 Alloalcanivorax xenomutans 0.02 12 0 G 3020833 Isoalcanivorax 0.02 12 0 S 1306787 Isoalcanivorax pacificus 0.02 12 12 S1 391936 Isoalcanivorax pacificus W11-5 0.00 1 0 G 59753 Alcanivorax 0.00 1 0 G1 2638842 unclassified Alcanivorax 0.00 1 1 S 1872427 Alcanivorax sp. 0.18 99 91 F 28256 Halomonadaceae 0.01 5 0 F1 114403 Zymobacter group 0.01 4 0 G 235572 Candidatus Portiera 0.01 4 4 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 114185 Candidatus Carsonella 0.00 1 0 S 114186 Candidatus Carsonella ruddii 0.00 1 1 S1 1202540 Candidatus Carsonella ruddii PC isolate NHV 0.00 2 0 G 2745 Halomonas 0.00 1 1 S 115561 Halomonas hydrothermalis 0.00 1 0 G1 2609666 unclassified Halomonas 0.00 1 1 S 2855441 Halomonas sp. 18071143 0.00 1 0 G 3137766 Vreelandella 0.00 1 1 S 2852117 Vreelandella profundi 0.01 3 0 F 2823145 Pleioneaceae 0.01 3 0 G 1502941 Pleionea 0.01 3 3 S 3070815 Pleionea litopenaei 0.00 1 0 F 135620 Oceanospirillaceae 0.00 1 0 G 28253 Marinomonas 0.00 1 1 S 2773454 Marinomonas algicola 0.00 1 0 F 224379 Hahellaceae 0.00 1 1 G 158481 Hahella 0.00 1 0 F 449732 Litorivicinaceae 0.00 1 0 G 418700 Litorivicinus 0.00 1 1 S 418701 Litorivicinus lipolyticus 0.22 121 0 O 135618 Methylococcales 0.22 121 67 F 403 Methylococcaceae 0.03 16 14 G 413 Methylococcus 0.00 1 1 S 414 Methylococcus capsulatus 0.00 1 0 G1 2618889 unclassified Methylococcus 0.00 1 1 S 2812648 Methylococcus sp. EFPC2 0.02 12 0 G 1295378 Methylogaea 0.02 12 12 S 1295382 Methylogaea oryzae 0.02 10 0 G 1760987 Methylomagnum 0.02 10 10 S 1760988 Methylomagnum ishizawai 0.01 7 0 G 429 Methylobacter 0.01 7 0 G1 2635283 unclassified Methylobacter 0.01 7 7 S 2911520 Methylobacter sp. YRD-M1 0.01 3 0 G 1808977 Candidatus Methylospira 0.01 3 3 S 1808979 Candidatus Methylospira mobilis 0.00 2 1 G 73778 Methylocaldum 0.00 1 1 S 1432792 Methylocaldum marinum 0.00 2 0 G 3135206 Candidatus Methylocalor 0.00 2 2 S 3108543 Candidatus Methylocalor cossyra 0.00 1 0 G 762296 Methylovulum 0.00 1 1 S 1704499 Methylovulum psychrotolerans 0.00 1 0 G 1221209 Methylomarinum 0.00 1 0 G1 2617533 unclassified Methylomarinum 0.00 1 1 S 3067653 Methylomarinum sp. Ch1-1 0.19 104 3 O 135613 Chromatiales 0.12 65 7 F 1046 Chromatiaceae 0.05 25 17 G 85072 Allochromatium 0.01 8 8 S 553982 Allochromatium tepidum 0.03 15 0 G 67575 Rheinheimera 0.03 15 0 G1 115860 unclassified Rheinheimera 0.02 12 12 S 3072790 Rheinheimera sp. MMS21-TC3 0.01 3 3 S 1763998 Rheinheimera sp. F8 0.01 6 4 G 1056 Thiocapsa 0.00 2 2 S 521689 Thiocapsa bogorovii 0.01 6 4 G 2796146 Candidatus Nitrosacidococcus 0.00 2 2 S 553981 Candidatus Nitrosacidococcus tergens 0.00 2 1 G 1227 Nitrosococcus 0.00 1 0 S 133539 Nitrosococcus halophilus 0.00 1 1 S1 472759 Nitrosococcus halophilus Nc 4 0.00 1 0 G 13724 Thiocystis 0.00 1 0 S 73141 Thiocystis violascens 0.00 1 1 S1 765911 Thiocystis violascens DSM 198 0.00 1 0 G 85073 Thermochromatium 0.00 1 0 S 1050 Thermochromatium tepidum 0.00 1 1 S1 316276 Thermochromatium tepidum ATCC 43061 0.00 1 0 G 1980513 Candidatus Nitrosoglobus 0.00 1 1 S 1630141 Candidatus Nitrosoglobus terrae 0.00 1 0 G 2828366 Caldichromatium 0.00 1 1 S 2699430 Caldichromatium japonicum 0.06 32 1 F 72276 Ectothiorhodospiraceae 0.03 17 0 G 1765964 Acidihalobacter 0.03 14 14 S 1765967 Acidihalobacter ferrooxydans 0.01 3 3 S 2792603 Acidihalobacter aeolianus 0.02 11 1 G 1335745 Spiribacter 0.01 8 0 G1 2629425 unclassified Spiribacter 0.01 8 8 S 2666185 Spiribacter sp. 2438 0.00 2 0 S 1335746 Spiribacter salinus 0.00 2 2 S1 1260251 Spiribacter salinus M19-40 0.00 2 2 G 85108 Halorhodospira 0.00 1 0 G 106633 Thioalkalivibrio 0.00 1 0 S 108010 Thioalkalivibrio paradoxus 0.00 1 1 S1 713585 Thioalkalivibrio paradoxus ARh 1 0.00 2 0 F 3067276 Sedimenticolaceae 0.00 2 0 G 2780488 Thiosocius 0.00 2 2 S 1973002 Thiosocius teredinicola 0.00 1 0 F 255526 Halothiobacillaceae 0.00 1 0 G 109262 Halothiobacillus 0.00 1 0 S 927 Halothiobacillus neapolitanus 0.00 1 1 S1 555778 Halothiobacillus neapolitanus c2 0.00 1 0 F 449719 Granulosicoccaceae 0.00 1 0 G 1860077 Sulfuriflexus 0.00 1 1 S 1811807 Sulfuriflexus mobilis 0.11 60 0 O 2887326 Moraxellales 0.11 60 5 F 468 Moraxellaceae 0.08 44 21 G 469 Acinetobacter 0.03 15 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.02 12 12 S 470 Acinetobacter baumannii 0.00 2 2 S 106654 Acinetobacter nosocomialis 0.00 1 1 S 48296 Acinetobacter pittii 0.01 4 4 S 202956 Acinetobacter towneri 0.00 2 1 G1 196816 unclassified Acinetobacter 0.00 1 1 S 2743575 Acinetobacter sp. NEB 394 0.00 1 1 S 2004650 Acinetobacter chinensis 0.00 1 1 S 40214 Acinetobacter johnsonii 0.02 11 2 G 497 Psychrobacter 0.02 9 0 G1 196806 unclassified Psychrobacter 0.02 9 9 S 1415574 Psychrobacter sp. LV10R520-6 0.09 52 1 O 135622 Alteromonadales 0.06 34 1 F 267890 Shewanellaceae 0.06 33 7 G 22 Shewanella 0.02 9 9 S 1028752 Shewanella aestuarii 0.01 6 6 S 62322 Shewanella baltica 0.01 5 5 S 24 Shewanella putrefaciens 0.01 5 5 G1 196818 unclassified Shewanella 0.00 1 1 S 2018305 Shewanella bicestrii 0.01 7 0 F 267888 Pseudoalteromonadaceae 0.01 7 3 G 53246 Pseudoalteromonas 0.01 4 0 G1 194690 unclassified Pseudoalteromonas 0.01 4 4 S 2785910 Pseudoalteromonas sp. A41-2 0.01 5 1 F 267889 Colwelliaceae 0.00 2 1 G 28228 Colwellia 0.00 1 1 G1 196834 unclassified Colwellia 0.00 2 0 G 1518149 Thalassotalea 0.00 2 0 G1 2614972 unclassified Thalassotalea 0.00 2 2 S 2594005 Thalassotalea sp. PS06 0.01 3 1 F 72275 Alteromonadaceae 0.00 1 1 G 261825 Agarivorans 0.00 1 0 G 2661818 Saliniradius 0.00 1 1 S 2183582 Saliniradius amylolyticus 0.00 1 0 F 267891 Moritellaceae 0.00 1 0 G 58050 Moritella 0.00 1 0 S 90736 Moritella marina 0.00 1 1 S1 1202962 Moritella marina ATCC 15381 0.00 1 0 F 267893 Idiomarinaceae 0.00 1 0 G 2800384 Pseudidiomarina 0.00 1 1 S 1940690 Pseudidiomarina andamanensis 0.09 52 0 O 135623 Vibrionales 0.09 52 3 F 641 Vibrionaceae 0.08 42 8 G 662 Vibrio 0.04 22 22 S 666 Vibrio cholerae 0.01 5 0 G1 717610 Vibrio harveyi group 0.01 3 3 S 669 Vibrio harveyi 0.00 2 1 S 670 Vibrio parahaemolyticus 0.00 1 1 S1 745023 Vibrio parahaemolyticus 10329 0.01 3 1 G1 2614977 unclassified Vibrio 0.00 1 1 S 2661921 Vibrio sp. THAF191c 0.00 1 1 S 2661922 Vibrio sp. THAF191d 0.01 3 0 S 52443 Vibrio tapetis 0.01 3 3 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 1 1 S 1534743 Vibrio hyugaensis 0.01 6 0 G 657 Photobacterium 0.01 6 4 S 553611 Photobacterium leiognathi 0.00 2 2 S1 48408 Photobacterium leiognathi subsp. mandapamensis 0.00 1 0 G 2014233 Thaumasiovibrio 0.00 1 1 S 1891207 Thaumasiovibrio subtropicus 0.08 47 0 O 118969 Legionellales 0.06 31 0 F 444 Legionellaceae 0.06 31 8 G 445 Legionella 0.03 14 0 S 446 Legionella pneumophila 0.03 14 6 S1 91891 Legionella pneumophila subsp. pneumophila 0.01 8 8 S2 272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 0.01 3 3 S 66969 Legionella waltersii 0.00 2 0 G1 2622702 unclassified Legionella 0.00 1 1 S 2662448 Legionella sp. MW5194 0.00 1 1 S 2755562 Legionella sp. PC997 0.00 1 1 S 450 Legionella longbeachae 0.00 1 1 S 456 Legionella jordanis 0.00 1 1 S 28084 Legionella cherrii 0.00 1 0 S 96230 Legionella fallonii 0.00 1 1 S1 1212491 Legionella fallonii LLAP-10 0.03 16 1 F 118968 Coxiellaceae 0.03 14 0 G 254245 Aquicella 0.02 11 11 S 254247 Aquicella siphonis 0.01 3 3 S 254246 Aquicella lusitana 0.00 1 0 G 776 Coxiella 0.00 1 1 G1 2676648 unclassified Coxiella (in: g-proteobacteria) 0.03 18 0 O 72273 Thiotrichales 0.02 13 5 F 135616 Piscirickettsiaceae 0.01 3 1 G 40222 Methylophaga 0.00 2 2 S 2881052 Methylophaga pinxianii 0.01 3 0 G 2039723 Thiomicrorhabdus 0.00 2 0 G1 2636650 unclassified Thiomicrorhabdus 0.00 2 2 S 2039724 Thiomicrorhabdus sp. 0.00 1 1 S 2211106 Thiomicrorhabdus aquaedulcis 0.00 1 1 G 933 Thiomicrospira 0.00 1 1 G 34067 Cycloclasticus 0.01 4 0 F 135617 Thiotrichaceae 0.01 3 0 G 1030 Thiothrix 0.00 2 2 S 96472 Thiothrix winogradskyi 0.00 1 1 S 525917 Thiothrix lacustris 0.00 1 0 G 1021 Beggiatoa 0.00 1 1 S 288004 Beggiatoa leptomitoformis 0.00 1 0 F 34064 Francisellaceae 0.00 1 0 G 262 Francisella 0.00 1 1 S 28110 Francisella philomiragia 0.03 18 0 O 1706369 Cellvibrionales 0.01 7 0 F 1706375 Spongiibacteraceae 0.01 6 0 G 1084558 Oceanicoccus 0.01 6 6 S 716816 Oceanicoccus sagamiensis 0.00 1 0 G 630749 Spongiibacter 0.00 1 1 S 2794344 Spongiibacter nanhainus 0.01 6 0 F 1706371 Cellvibrionaceae 0.01 5 1 G 10 Cellvibrio 0.00 2 2 S 155077 Cellvibrio japonicus 0.00 2 1 G1 2624793 unclassified Cellvibrio 0.00 1 1 S 1987723 Cellvibrio sp. PSBB006 0.00 1 1 G 2425 Teredinibacter 0.01 3 0 F 1706373 Microbulbiferaceae 0.01 3 0 G 48073 Microbulbifer 0.01 3 3 S 86173 Microbulbifer elongatus 0.00 2 0 F 1706372 Halieaceae 0.00 1 0 G 2678529 Kineobactrum 0.00 1 1 S 2708301 Kineobactrum salinum 0.00 1 0 G 3040948 Candidatus Paraluminiphilus 0.00 1 1 S 2518994 Candidatus Paraluminiphilus aquimaris 0.02 12 0 O 135624 Aeromonadales 0.02 12 0 F 84642 Aeromonadaceae 0.02 12 1 G 642 Aeromonas 0.01 7 7 S 645 Aeromonas salmonicida 0.01 3 3 S 654 Aeromonas veronii 0.00 1 1 S 196024 Aeromonas dhakensis 0.01 7 0 O 135625 Pasteurellales 0.01 7 2 F 712 Pasteurellaceae 0.01 4 0 G 713 Actinobacillus 0.01 4 0 S 718 Actinobacillus equuli 0.01 4 4 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 1 0 G 75984 Mannheimia 0.00 1 1 S 85404 Mannheimia varigena 0.01 5 0 C1 118884 Gammaproteobacteria incertae sedis 0.01 3 0 C2 32036 sulfur-oxidizing symbionts 0.01 3 0 G 2686004 Candidatus Vondammii 0.01 3 0 G1 2687300 unclassified Candidatus Vondammii 0.01 3 3 S 2687299 Candidatus Vondammii sp. HM_W22 0.00 1 0 G 204619 Candidatus Nardonella 0.00 1 1 S 1972134 endosymbiont of Sipalinus gigas 0.00 1 0 G 2738850 Candidatus Reidiella 0.00 1 1 S 2738883 Candidatus Reidiella endopervernicosa 0.01 4 0 O 3060226 Steroidobacterales 0.01 4 0 F 2689614 Steroidobacteraceae 0.01 4 0 G 469322 Steroidobacter 0.01 4 4 S 465721 Steroidobacter denitrificans 0.01 3 0 O 1934945 Immundisolibacterales 0.01 3 0 F 1934946 Immundisolibacteraceae 0.01 3 0 G 1934947 Immundisolibacter 0.01 3 3 S 1810504 Immundisolibacter cernigliae 0.00 2 0 O 1775403 Nevskiales 0.00 2 1 F 568386 Nevskiaceae 0.00 1 0 G 2893022 Flagellatimonas 0.00 1 1 S 2806210 Flagellatimonas centrodinii 0.00 1 0 C1 33811 unclassified Gammaproteobacteria 0.00 1 1 S 1248727 endosymbiont of unidentified scaly snail isolate Monju 0.00 1 0 O 1692040 Acidiferrobacterales 0.00 1 0 F 1692041 Acidiferrobacteraceae 0.00 1 0 G 1692042 Sulfurifustis 0.00 1 1 S 1675686 Sulfurifustis variabilis 0.00 1 0 O 135615 Cardiobacteriales 0.00 1 0 F 868 Cardiobacteriaceae 0.00 1 0 G 869 Dichelobacter 0.00 1 1 S 870 Dichelobacter nodosus 25.24 13963 120 C 28211 Alphaproteobacteria 11.13 6156 7 O 204441 Rhodospirillales 11.06 6118 154 F 433 Acetobacteraceae 9.71 5370 5370 G 522 Acidiphilium 0.94 520 0 G 50709 Acidocella 0.94 520 0 G1 2648610 unclassified Acidocella 0.94 520 520 S 2697363 Acidocella sp. MX-AZ03 0.05 27 1 G 125216 Roseomonas 0.05 25 25 S 1750527 Roseomonas fluvialis 0.00 1 0 G1 2617492 unclassified Roseomonas 0.00 1 1 S 2897332 Roseomonas sp. OT10 0.04 21 0 G 512381 Acidisoma 0.04 21 0 G1 2634065 unclassified Acidisoma 0.04 21 21 S 3040935 Acidisoma sp. PAMC 29798 0.01 6 0 G 1079922 Commensalibacter 0.01 6 6 S 2070537 Commensalibacter melissae 0.01 4 0 G 2870717 Pseudoroseomonas 0.01 4 4 S 204525 Pseudoroseomonas cervicalis 0.01 4 0 G 1434011 Komagataeibacter 0.01 4 4 S 65958 Komagataeibacter oboediens 0.01 3 0 G 2603324 Acidibrevibacterium 0.01 3 3 S 1969806 Acidibrevibacterium fodinaquatile 0.01 3 0 G 504465 Rhodovastum 0.01 3 3 S 504468 Rhodovastum atsumiense 0.00 2 0 G 153497 Kozakia 0.00 2 2 S 153496 Kozakia baliensis 0.00 1 0 G 441 Gluconobacter 0.00 1 1 S 318683 Gluconobacter albidus 0.00 1 0 G 2791118 Oecophyllibacter 0.00 1 1 S 2558360 Oecophyllibacter saccharovorans 0.00 1 0 G 434 Acetobacter 0.00 1 1 S 65959 Acetobacter pomorum 0.00 1 0 G 35812 Roseococcus 0.00 1 1 S 2771361 Roseococcus microcysteis 0.03 17 0 F 2844866 Thalassospiraceae 0.03 14 4 G 168934 Thalassospira 0.02 9 9 S 2048283 Thalassospira marina 0.00 1 0 G1 2648997 unclassified Thalassospira 0.00 1 1 S 2946605 Thalassospira sp. GO-4 0.01 3 0 G 1182780 Magnetospira 0.01 3 0 G1 2685734 unclassified Magnetospira 0.01 3 3 S 1288970 Magnetospira sp. QH-2 0.01 6 0 F 2829815 Azospirillaceae 0.01 3 2 G 191 Azospirillum 0.00 1 1 S 192 Azospirillum brasilense 0.01 3 0 G 1543705 Nitrospirillum 0.01 3 0 S 3144925 Nitrospirillum viridazoti 0.01 3 3 S1 1441467 Nitrospirillum viridazoti CBAmc 0.01 4 0 F 41295 Rhodospirillaceae 0.01 3 0 G 1612157 Pararhodospirillum 0.01 3 0 S 1084 Pararhodospirillum photometricum 0.01 3 3 S1 1150469 Pararhodospirillum photometricum DSM 122 0.00 1 0 G 111830 Defluviicoccus 0.00 1 1 S 111831 Defluviicoccus vanus 0.00 1 0 F 597359 Kiloniellaceae 0.00 1 0 G 1647175 Aestuariispira 0.00 1 1 S 2775080 Aestuariispira ectoiniformans 0.00 1 0 F 2690195 Elioraeaceae 0.00 1 0 G 457933 Elioraea 0.00 1 1 S 2843330 Elioraea tepida 0.00 1 0 F 2844601 Stellaceae 0.00 1 0 G 93 Stella 0.00 1 1 S 94 Stella humosa 0.00 1 0 F 3031143 Magnetovibrionaceae 0.00 1 0 G 1866954 Varunaivibrio 0.00 1 1 S 1773489 Varunaivibrio sulfuroxidans 7.26 4016 422 O 204455 Rhodobacterales 6.15 3405 2979 F 31989 Paracoccaceae 0.20 112 0 G 2937410 Gymnodinialimonas 0.20 112 112 S 2856823 Gymnodinialimonas ceratoperidinii 0.14 76 14 G 265 Paracoccus 0.04 23 23 S 659350 Paracoccus stylophorae 0.03 16 16 S 2259340 Paracoccus suum 0.02 9 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.01 8 8 S 2760307 Paracoccus sp. MC1862 0.00 1 1 S 3030011 Paracoccus sp. S3-43 0.01 6 6 S 266 Paracoccus denitrificans 0.01 5 0 S 34003 Paracoccus aminophilus 0.01 5 5 S1 1367847 Paracoccus aminophilus JCM 7686 0.00 2 2 S 1529068 Paracoccus tegillarcae 0.00 1 1 S 3017784 Paracoccus albus 0.09 49 0 G 285107 Thioclava 0.09 49 49 S 1549850 Thioclava electrotropha 0.04 22 0 G 204456 Gemmobacter 0.03 14 14 S 2169400 Gemmobacter aquarius 0.01 8 8 S 2840474 Gemmobacter fulvus 0.04 21 0 G 1060 Rhodobacter 0.03 18 18 S 1061 Rhodobacter capsulatus 0.00 2 0 G1 196779 unclassified Rhodobacter 0.00 2 2 S 2033869 Rhodobacter sp. CZR27 0.00 1 1 S 1850250 Rhodobacter xanthinilyticus 0.03 18 0 G 1209946 Roseicitreum 0.03 18 18 S 564137 Roseicitreum antarcticum 0.03 15 2 G 121820 Roseinatronobacter 0.02 13 0 G1 2641430 unclassified Roseinatronobacter 0.02 13 13 S 3035471 Roseinatronobacter sp. S2 0.03 15 0 G 2831955 Pikeienuella 0.03 15 15 S 2748098 Pikeienuella piscinae 0.02 13 0 G 2944826 Pontibrevibacter 0.02 13 13 S 2758038 Pontibrevibacter nitratireducens 0.02 12 0 G 1955420 Silicimonas 0.02 12 12 S 1826607 Silicimonas algicola 0.02 12 0 G 34008 Rhodovulum 0.02 12 0 G1 2631432 unclassified Rhodovulum 0.02 12 12 S 1564506 Rhodovulum sp. P5 0.02 11 0 G 3050722 Algicella 0.02 11 11 S 2683284 Algicella marina 0.02 10 4 G 2211641 Yoonia 0.01 6 0 G1 2629118 unclassified Yoonia 0.01 6 6 S 3137369 Yoonia sp. BS5-3 0.01 8 0 G 2818469 Fuscovulum 0.01 8 8 S 1075 Fuscovulum blasticum 0.01 5 0 F1 3020825 Marivivens group 0.01 5 0 G 1759396 Marivivens 0.01 5 0 G1 2622455 unclassified Marivivens 0.01 5 5 S 3051171 Marivivens sp. LCG002 0.01 4 2 G 1653176 Cereibacter 0.00 2 2 S 1063 Cereibacter sphaeroides 0.01 3 0 G 1097466 Defluviimonas 0.01 3 0 G1 2632198 unclassified Defluviimonas 0.01 3 3 S 3121287 Defluviimonas sp. SAOS-178_SWC 0.01 3 0 G 2946607 Neotabrizicola 0.01 3 3 S 2807096 Neotabrizicola shimadae 0.00 2 0 G 2211635 Cognatishimia 0.00 2 2 S 1715691 Cognatishimia activa 0.00 2 0 G 3029205 Abyssibius 0.00 2 2 S 2881234 Abyssibius alkaniclasticus 0.00 2 0 G 238783 Pseudorhodobacter 0.00 2 2 S 2500533 Pseudorhodobacter turbinis 0.00 2 0 G 1775705 Frigidibacter 0.00 2 2 S 1335048 Frigidibacter mobilis 0.00 1 0 G 1434002 Falsirhodobacter 0.00 1 1 S 2692330 Falsirhodobacter algicola 0.00 1 0 G 1844015 Pontivivens 0.00 1 1 S 2789856 Pontivivens ytuae 0.00 1 0 G 2211638 Limimaricola 0.00 1 1 S 1492771 Limimaricola variabilis 0.00 1 0 G 1679449 Pseudooceanicola 0.00 1 1 S 1537215 Pseudooceanicola algae 0.00 1 0 G 2680018 Rhodophyticola 0.00 1 0 G1 2680031 unclassified Rhodophyticola 0.00 1 1 S 2916397 Rhodophyticola sp. CCM32 0.00 1 0 G 2683599 Paroceanicella 0.00 1 1 S 2579971 Paroceanicella profunda 0.00 1 0 G 2778525 Profundibacter 0.00 1 1 S 2171755 Profundibacter amoris 0.00 1 0 G 366614 Haematobacter 0.00 1 1 S 195105 Haematobacter massiliensis 0.00 1 0 G 2831925 Pukyongiella 0.00 1 1 S 2605946 Pukyongiella litopenaei 0.34 189 13 F 2854170 Roseobacteraceae 0.13 72 0 G 2919626 Alloyangia 0.13 72 72 S 311180 Alloyangia pacifica 0.11 62 0 G 266808 Thalassobacter 0.11 62 62 S 266809 Thalassobacter stenotrophicus 0.03 19 0 G 74030 Roseovarius 0.03 16 0 G1 2614913 unclassified Roseovarius 0.03 16 16 S 2823043 Roseovarius sp. SCSIO 43702 0.00 2 2 S 74031 Roseovarius tolerans 0.00 1 1 S 337701 Roseovarius pacificus 0.01 8 1 G 60136 Sulfitobacter 0.01 6 0 G1 196795 unclassified Sulfitobacter 0.01 6 6 S 2070369 Sulfitobacter sp. JL08 0.00 1 1 S 60137 Sulfitobacter pontiacus 0.01 4 3 G 263377 Salipiger 0.00 1 0 G1 2640570 unclassified Salipiger 0.00 1 1 S 3029062 Salipiger sp. H15 0.01 4 0 G 97050 Ruegeria 0.01 4 4 S 89184 Ruegeria pomeroyi 0.01 3 0 G 875170 Celeribacter 0.01 3 0 G1 1188777 environmental samples 0.01 3 3 S 1303376 uncultured Celeribacter sp. 0.00 2 0 G 336277 Roseicyclus 0.00 2 2 S 2161673 Roseicyclus marinus 0.00 1 0 G 1433986 Actibacterium 0.00 1 0 G1 2649852 unclassified Actibacterium 0.00 1 1 S 1609966 Actibacterium sp. EMB200-NS6 0.00 1 0 G 191028 Leisingera 0.00 1 1 S 506591 Leisingera caerulea 4.27 2361 220 O 356 Hyphomicrobiales 1.23 682 3 F 255475 Aurantimonadaceae 1.12 617 614 G 414371 Aureimonas 0.01 3 3 S 370622 Aureimonas altamirensis 0.11 62 61 G 293088 Martelella 0.00 1 1 S 2583532 Martelella lutilitoris 0.85 473 43 F 335928 Xanthobacteraceae 0.66 367 340 G 279 Xanthobacter 0.05 27 27 S 2528964 Xanthobacter dioxanivorans 0.05 27 15 G 556257 Pseudolabrys 0.02 11 11 S 331696 Pseudolabrys taiwanensis 0.00 1 0 G1 2638514 unclassified Pseudolabrys 0.00 1 1 S 2562284 Pseudolabrys sp. FHR47 0.04 20 0 G 99 Ancylobacter 0.03 19 19 S 223390 Ancylobacter polymorphus 0.00 1 1 S 1745854 Ancylobacter pratisalsi 0.01 8 0 G 45402 Aquabacter 0.01 8 0 G1 2663263 unclassified Aquabacter 0.01 8 8 S 2820278 Aquabacter sp. L1I39 0.01 7 0 G 6 Azorhizobium 0.01 7 0 S 7 Azorhizobium caulinodans 0.01 7 7 S1 438753 Azorhizobium caulinodans ORS 571 0.00 1 0 G 204476 Labrys 0.00 1 0 G1 2688601 unclassified Labrys (in: a-proteobacteria) 0.00 1 1 S 2789216 Labrys sp. KNU-23 0.34 187 1 F 118882 Brucellaceae 0.34 186 167 F1 2826938 Brucella/Ochrobactrum group 0.03 19 7 G 234 Brucella 0.01 6 2 S 29459 Brucella melitensis 0.01 4 0 S1 645169 Brucella melitensis bv. 2 0.01 4 4 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.01 3 0 G1 2632610 unclassified Brucella 0.00 2 2 S 2986424 Brucella sp. MAB-22 0.00 1 1 S 3142977 Brucella sp. BE17 0.00 2 2 S 94625 Brucella intermedia 0.00 1 0 S 235 Brucella abortus 0.00 1 0 S1 1567505 Brucella abortus bv. 9 0.00 1 1 S2 520455 Brucella abortus bv. 9 str. C68 0.25 138 1 F 45401 Hyphomicrobiaceae 0.22 122 24 G 81 Hyphomicrobium 0.18 98 17 G1 2619925 unclassified Hyphomicrobium 0.09 49 49 S 2682968 Hyphomicrobium sp. ghe19 0.06 32 32 S 717785 Hyphomicrobium sp. MC1 0.02 9 0 G 29407 Rhodoplanes 0.02 9 0 G1 2619116 unclassified Rhodoplanes 0.02 9 9 S 674703 Rhodoplanes sp. Z2-YC6860 0.01 5 0 G 119044 Filomicrobium 0.01 5 5 S 1608628 Candidatus Filomicrobium marinum 0.00 1 0 G 1068 Rhodomicrobium 0.00 1 1 S 2498452 Rhodomicrobium lacus 0.24 131 7 F 69277 Phyllobacteriaceae 0.16 87 84 G 31988 Aminobacter 0.01 3 0 G1 2644704 unclassified Aminobacter 0.01 3 3 S 2774562 Aminobacter sp. SR38 0.07 36 3 G 68287 Mesorhizobium 0.05 29 7 G1 325217 unclassified Mesorhizobium 0.03 19 19 S 2082387 Mesorhizobium sp. Pch-S 0.00 2 2 S 2654249 Mesorhizobium sp. NBSH29 0.00 1 1 S 1854057 Mesorhizobium sp. AA22 0.01 4 4 S 2725666 Mesorhizobium terrae 0.00 1 1 G 245876 Nitratireductor 0.19 103 28 F 41294 Nitrobacteraceae 0.10 57 57 G 1033 Afipia 0.02 11 2 G 1073 Rhodopseudomonas 0.02 9 9 S 1076 Rhodopseudomonas palustris 0.01 5 3 G 374 Bradyrhizobium 0.00 2 0 S 2992140 Bradyrhizobium barranii 0.00 2 2 S1 2823807 Bradyrhizobium barranii subsp. barranii 0.00 1 0 G 911 Nitrobacter 0.00 1 0 S 912 Nitrobacter hamburgensis 0.00 1 1 S1 323097 Nitrobacter hamburgensis X14 0.00 1 0 G 1395974 Tardiphaga 0.00 1 1 S 340268 Tardiphaga alba 0.18 100 8 F 82115 Rhizobiaceae 0.12 66 20 F1 227290 Rhizobium/Agrobacterium group 0.06 33 20 G 379 Rhizobium 0.01 4 0 S 384 Rhizobium leguminosarum 0.01 4 4 S1 386 Rhizobium leguminosarum bv. trifolii 0.01 4 0 G1 2613769 unclassified Rhizobium 0.01 4 4 S 2775403 Rhizobium sp. TH2 0.01 3 0 S 56730 Rhizobium gallicum 0.01 3 0 S1 142627 Rhizobium gallicum bv. gallicum 0.01 3 3 S2 1041138 Rhizobium gallicum bv. gallicum R602sp 0.00 1 0 S 29449 Rhizobium etli 0.00 1 0 S1 323733 Rhizobium etli bv. mimosae 0.00 1 1 S2 1432050 Rhizobium etli bv. mimosae str. IE4771 0.00 1 1 S 2081791 Rhizobium ruizarguesonis 0.01 7 0 G 1612611 Pararhizobium 0.01 7 7 G1 2643050 unclassified Pararhizobium 0.01 5 0 G 357 Agrobacterium 0.01 4 0 G1 1183400 Agrobacterium tumefaciens complex 0.01 4 4 S 358 Agrobacterium tumefaciens 0.00 1 1 S 1183413 Agrobacterium salinitolerans 0.00 1 0 G 1525371 Neorhizobium 0.00 1 1 S 515361 Neorhizobium petrolearium 0.02 11 0 F1 227292 Sinorhizobium/Ensifer group 0.02 11 1 G 28105 Sinorhizobium 0.01 5 5 S 110322 Sinorhizobium terangae 0.01 3 1 S 382 Sinorhizobium meliloti 0.00 2 2 S1 693982 Sinorhizobium meliloti AK83 0.00 2 0 G1 663276 Sinorhizobium fredii group 0.00 2 0 S 380 Sinorhizobium fredii 0.00 2 2 S1 394 Sinorhizobium fredii NGR234 0.01 8 4 G 323620 Shinella 0.01 3 3 G1 2643062 unclassified Shinella 0.00 1 1 S 352475 Shinella zoogloeoides 0.01 7 1 G 34019 Liberibacter 0.01 3 0 S 309868 Candidatus Liberibacter americanus 0.01 3 3 S1 1261131 Candidatus Liberibacter americanus str. Sao Paulo 0.00 2 2 S 34021 Candidatus Liberibacter asiaticus 0.00 1 0 S 556287 Candidatus Liberibacter solanacearum 0.00 1 1 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.12 67 6 F 2831106 Devosiaceae 0.08 47 7 G 46913 Devosia 0.07 38 1 G1 196773 unclassified Devosia 0.05 27 27 S 1736675 Devosia sp. A16 0.02 10 10 S 3049774 Devosia sp. RR2S18 0.00 1 1 S 400770 Devosia ginsengisoli 0.00 1 1 S 2657486 Devosia beringensis 0.02 9 1 G 1082930 Pelagibacterium 0.01 7 7 S 531813 Pelagibacterium halotolerans 0.00 1 1 G1 2623280 unclassified Pelagibacterium 0.01 4 0 G 3064792 Mariluticola 0.01 4 4 S 2909283 Mariluticola halotolerans 0.00 1 0 G 623276 Maritalea 0.00 1 1 S 454601 Maritalea myrionectae 0.12 65 1 F 2813035 Parvibaculaceae 0.10 55 0 G 256616 Parvibaculum 0.10 55 0 S 256618 Parvibaculum lavamentivorans 0.10 55 55 S1 402881 Parvibaculum lavamentivorans DS-1 0.01 5 0 G 444432 Anderseniella 0.01 5 0 G1 2614933 unclassified Anderseniella 0.01 5 5 S 1922226 Anderseniella sp. Alg231-50 0.01 3 0 G 2838250 Kaustia 0.01 3 3 S 2593653 Kaustia mangrovi 0.00 1 0 G 1541445 Candidatus Phaeomarinobacter 0.00 1 1 S 1458461 Candidatus Phaeomarinobacter ectocarpi 0.07 39 0 F 2831100 Boseaceae 0.07 39 35 G 85413 Bosea 0.00 2 2 G1 2653178 unclassified Bosea (in: a-proteobacteria) 0.00 2 2 S 3068632 Bosea beijingensis 0.07 38 0 O1 119042 Hyphomicrobiales incertae sedis 0.05 25 0 G 169055 Nordella 0.05 25 0 G1 2623691 unclassified Nordella 0.05 25 25 S 2712222 Nordella sp. HKS 07 0.02 11 0 G 212791 Enhydrobacter 0.02 11 0 G1 2632691 unclassified Enhydrobacter 0.02 11 11 S 1894999 Enhydrobacter sp. 0.00 2 0 G 1734920 Pseudorhodoplanes 0.00 2 2 S 1235591 Pseudorhodoplanes sinuspersici 0.04 20 0 F 772 Bartonellaceae 0.04 20 5 G 773 Bartonella 0.02 9 1 G1 2645622 unclassified Bartonella 0.01 5 5 S 2759660 Bartonella sp. HY038 0.00 2 2 S 3057550 Bartonella sp. TP 0.00 1 1 S 1933904 Bartonella sp. WD16.2 0.01 5 5 S 803 Bartonella quintana 0.00 1 1 S 774 Bartonella bacilliformis 0.03 19 1 F 119045 Methylobacteriaceae 0.03 18 12 G 407 Methylobacterium 0.01 4 4 S 270351 Methylobacterium aquaticum 0.00 2 2 G1 2615210 unclassified Methylobacterium 0.03 16 2 F 2821832 Stappiaceae 0.02 12 0 G 150830 Roseibium 0.02 12 0 G1 1936170 environmental samples 0.02 12 12 S 1936171 uncultured Roseibium sp. 0.00 1 1 G 258255 Pseudovibrio 0.00 1 0 G 1406135 Breoghania 0.00 1 0 G1 2624130 unclassified Breoghania 0.00 1 1 S 2065378 Breoghania sp. 0.02 13 2 F 45404 Beijerinckiaceae 0.01 5 0 G 184923 Methylocapsa 0.01 5 0 G1 2639413 unclassified Methylocapsa 0.01 5 5 S 3041435 Methylocapsa sp. D3K7 0.00 2 0 G 532 Beijerinckia 0.00 2 0 S 533 Beijerinckia indica 0.00 2 0 S1 31994 Beijerinckia indica subsp. indica 0.00 2 2 S2 395963 Beijerinckia indica subsp. indica ATCC 9039 0.00 2 2 G 120652 Methylocella 0.00 2 0 G 1156568 Methylovirgula 0.00 2 0 G1 2640612 unclassified Methylovirgula 0.00 2 2 S 2293567 Methylovirgula sp. 4M-Z18 0.02 11 0 F 2843308 Pleomorphomonadaceae 0.01 7 0 G 261933 Pleomorphomonas 0.01 7 0 G1 442120 environmental samples 0.01 7 7 S 442121 uncultured Pleomorphomonas sp. 0.01 4 0 G 1572860 Hartmannibacter 0.01 4 4 S 1482074 Hartmannibacter diazotrophicus 0.02 10 4 F 31993 Methylocystaceae 0.01 5 4 G 133 Methylocystis 0.00 1 1 S 391905 Methylocystis heyeri 0.00 1 0 G 425 Methylosinus 0.00 1 0 S 426 Methylosinus trichosporium 0.00 1 1 S1 595536 Methylosinus trichosporium OB3b 0.01 8 0 F 3149309 Methylopilaceae 0.01 8 0 G 2041902 Chenggangzhangella 0.01 8 8 S 1437009 Chenggangzhangella methanolivorans 0.01 6 0 F 2685818 Amorphaceae 0.01 6 0 G 1904377 Acuticoccus 0.01 6 4 G1 2631034 unclassified Acuticoccus 0.00 2 2 S 3072793 Acuticoccus sp. MNP-M23 0.01 5 0 F 3149308 Rhodoligotrophaceae 0.01 5 0 G 987053 Rhodoligotrophos 0.01 5 0 G1 2635862 unclassified Rhodoligotrophos 0.01 5 5 S 3069264 Rhodoligotrophos sp. CJ14 0.00 2 0 F 2829814 Ahrensiaceae 0.00 2 0 G 1594166 Oricola 0.00 2 2 S 2742145 Oricola thermophila 0.00 2 0 F 2137278 Salinarimonadaceae 0.00 2 0 G 690086 Salinarimonas 0.00 2 0 G1 2646111 unclassified Salinarimonas 0.00 2 2 S 2766526 Salinarimonas sp. 0.00 2 0 F 2843305 Phreatobacteraceae 0.00 2 0 G 1632780 Phreatobacter 0.00 1 1 S 1868589 Phreatobacter cathodiphilus 0.00 1 1 S 1940610 Phreatobacter stygius 0.00 2 0 F 2036754 Chelatococcaceae 0.00 2 2 G 28209 Chelatococcus 0.00 1 0 F 2831090 Blastochloridaceae 0.00 1 1 G 59282 Blastochloris 0.00 1 0 F 2723775 Lichenihabitantaceae 0.00 1 1 G 2723776 Lichenihabitans 2.13 1177 18 O 204457 Sphingomonadales 1.09 601 83 F 335929 Erythrobacteraceae 0.86 474 2 G 2676755 Croceibacterium 0.85 470 470 S 1267766 Croceibacterium atlanticum 0.00 1 0 G1 2676756 unclassified Croceibacterium 0.00 1 1 S 3121290 Croceibacterium sp. TMG7-5b_MA50 0.00 1 1 S 3064139 Croceibacterium aestuarii 0.03 17 9 F1 2800788 Erythrobacter/Porphyrobacter group 0.01 5 0 G 1111 Porphyrobacter 0.01 5 0 G1 2683265 unclassified Porphyrobacter 0.01 4 4 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.00 1 1 S 2023229 Porphyrobacter sp. HT-58-2 0.01 3 0 G 1041 Erythrobacter 0.01 3 1 G1 2633097 unclassified Erythrobacter 0.00 1 1 S 1042 Erythrobacter sp. 0.00 1 1 S 2829500 Erythrobacter sp. JK5 0.01 7 0 G 2800682 Paraurantiacibacter 0.01 7 7 S 645517 Paraurantiacibacter namhicola 0.01 6 0 G 2800680 Alteriqipengyuania 0.01 6 6 S 3053610 Alteriqipengyuania flavescens 0.01 5 1 G 2800681 Aurantiacibacter 0.01 3 0 G1 2800693 unclassified Aurantiacibacter 0.01 3 3 S 3009083 Aurantiacibacter sp. MUD61 0.00 1 1 S 1648404 Aurantiacibacter atlanticus 0.01 4 0 G 1295327 Croceicoccus 0.01 3 3 S 450378 Croceicoccus marinus 0.00 1 1 G1 2629967 unclassified Croceicoccus 0.01 3 0 G 2800686 Tsuneonella 0.00 2 2 S 2338327 Tsuneonella amylolytica 0.00 1 0 G1 2800703 unclassified Tsuneonella 0.00 1 1 S 3042152 Tsuneonella sp. CC-YZS046 0.00 2 0 G 361177 Altererythrobacter 0.00 2 0 G1 2614945 unclassified Altererythrobacter 0.00 1 1 S 2060312 Altererythrobacter sp. B11 0.00 1 1 S 2067415 Altererythrobacter sp. TH136 1.00 551 163 F 41297 Sphingomonadaceae 0.49 269 225 G 13687 Sphingomonas 0.01 7 7 S 1541170 Sphingomonas morindae 0.01 6 0 G1 196159 unclassified Sphingomonas 0.01 3 3 S 2937787 Sphingomonas sp. SUN039 0.00 1 1 S 2714942 Sphingomonas sp. HDW15A 0.00 1 1 S 2653203 Sphingomonas sp. CL5.1 0.00 1 1 S 2596913 Sphingomonas sp. NBWT7 0.01 5 5 S 386874 Sphingomonas sediminicola 0.01 4 4 S 2594473 Sphingomonas xanthus 0.01 4 4 S 2071607 Sphingomonas rhizophila 0.01 3 3 S 2698828 Sphingomonas lacunae 0.01 3 3 S 2714943 Sphingomonas piscis 0.01 3 3 S 2872652 Sphingomonas nostoxanthinifaciens 0.00 2 2 S 2681549 Sphingomonas profundi 0.00 2 2 S 298708 Sphingomonas kaistensis 0.00 2 2 S 2714944 Sphingomonas sinipercae 0.00 1 1 S 2764186 Sphingomonas sabuli 0.00 1 1 S 1813468 Sphingomonas naphthae 0.00 1 1 S 1176646 Sphingomonas daechungensis 0.11 62 22 G 165696 Novosphingobium 0.07 36 11 G1 2644732 unclassified Novosphingobium 0.02 13 13 S 3079861 Novosphingobium sp. ZN18A2 0.02 12 12 S 2675225 Novosphingobium sp. Gsoil 351 0.01 3 3 S 158500 Novosphingobium resinovorum 0.00 1 1 S 2728851 Novosphingobium olei 0.04 21 0 G 1434046 Sphingorhabdus 0.03 14 14 S 1913578 Sphingorhabdus lutea 0.01 7 7 S 392610 Sphingorhabdus lacus 0.02 9 7 G 165697 Sphingopyxis 0.00 2 0 G1 2614943 unclassified Sphingopyxis 0.00 2 2 S 2482763 Sphingopyxis sp. YF1 0.01 8 0 G 2676781 Aquisediminimonas 0.01 8 8 S 1550733 Aquisediminimonas profunda 0.01 7 2 G 165695 Sphingobium 0.01 5 0 G1 2611147 unclassified Sphingobium 0.01 5 5 S 627192 Sphingobium sp. SYK-6 0.01 5 4 G 1227948 Sphingomicrobium 0.00 1 0 G1 2627843 unclassified Sphingomicrobium 0.00 1 1 S 3133972 Sphingomicrobium sp. XHP0239 0.01 4 0 G 1763827 Hankyongella 0.01 4 4 S 1763828 Hankyongella ginsenosidimutans 0.00 2 0 G 2709685 Parasphingorhabdus 0.00 2 0 G1 2709687 unclassified Parasphingorhabdus 0.00 2 2 S 3071408 Parasphingorhabdus sp. SCSIO 66989 0.00 1 0 G 1649486 Rhizorhabdus 0.00 1 1 S 1850238 Rhizorhabdus dicambivorans 0.01 7 0 F 2820280 Sphingosinicellaceae 0.01 5 0 G 335405 Sphingosinicella 0.01 4 4 S 335406 Sphingosinicella microcystinivorans 0.00 1 0 G1 2644549 unclassified Sphingosinicella 0.00 1 1 S 1892855 Sphingosinicella sp. BN140058 0.00 1 1 G 1508451 Polymorphobacter 0.00 1 0 G 2883109 Sandaracinobacteroides 0.00 1 1 S 2759707 Sandaracinobacteroides saxicola 0.07 39 0 O 204458 Caulobacterales 0.07 39 17 F 76892 Caulobacteraceae 0.01 8 1 G 75 Caulobacter 0.01 6 6 S 69666 Caulobacter mirabilis 0.00 1 0 G1 2648921 unclassified Caulobacter 0.00 1 1 S 3016000 Caulobacter sp. NIBR1757 0.01 7 0 G 20 Phenylobacterium 0.00 2 2 S 2201350 Phenylobacterium parvum 0.00 2 0 G1 2640670 unclassified Phenylobacterium 0.00 1 1 S 2903901 Phenylobacterium sp. LH3H17 0.00 1 1 S 3015177 Phenylobacterium sp. NIBR 498073 0.00 2 2 S 2823693 Phenylobacterium montanum 0.00 1 0 S 284016 Phenylobacterium zucineum 0.00 1 1 S1 450851 Phenylobacterium zucineum HLK1 0.01 5 1 G 41275 Brevundimonas 0.00 2 2 S 172043 Brevundimonas nasdae 0.00 2 0 G1 2622653 unclassified Brevundimonas 0.00 2 2 S 2995143 Brevundimonas sp. SL130 0.00 1 0 G 76890 Asticcacaulis 0.00 1 1 G1 2628350 unclassified Asticcacaulis 0.00 1 0 G 2768684 Terricaulis 0.00 1 1 S 2686094 Terricaulis silvestris 0.04 24 0 O 1921002 Holosporales 0.03 17 0 F 1777752 Candidatus Paracaedibacteraceae 0.03 15 0 G 1521255 Candidatus Paracaedibacter 0.03 15 15 S 91604 Candidatus Paracaedibacter acanthamoebae 0.00 2 0 G 3163645 Candidatus Bodocaedibacter 0.00 2 2 S 2741701 Candidatus Bodocaedibacter vickermanii 0.01 6 0 F 2100208 Caedimonadaceae 0.01 6 0 G 1509243 Candidatus Nucleicultrix 0.01 6 0 S 1509244 Candidatus Nucleicultrix amoebiphila 0.01 6 6 S1 1414854 Candidatus Nucleicultrix amoebiphila FS5 0.00 1 0 F 44746 Holosporaceae 0.00 1 0 G 2601651 Candidatus Nesciobacter 0.00 1 1 S 2601668 Candidatus Nesciobacter abundans 0.03 18 6 O 766 Rickettsiales 0.01 8 1 F 775 Rickettsiaceae 0.01 6 3 F1 33988 Rickettsieae 0.00 2 0 G 780 Rickettsia 0.00 1 1 G1 114277 spotted fever group 0.00 1 0 G1 114295 unclassified Rickettsia 0.00 1 1 S 3066252 Rickettsia endosymbiont of Rhinocyllus conicus 0.00 1 0 G 69474 Orientia 0.00 1 1 S 784 Orientia tsutsugamushi 0.00 1 0 G 2115980 Candidatus Phycorickettsia 0.00 1 1 S 2115978 Candidatus Phycorickettsia trachydisci 0.00 2 0 F 942 Anaplasmataceae 0.00 2 2 G 768 Anaplasma 0.00 2 0 F 1328881 Candidatus Midichloriaceae 0.00 1 0 G 411566 Candidatus Midichloria 0.00 1 0 S 234827 Candidatus Midichloria mitochondrii 0.00 1 1 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.00 1 0 G 1175554 Candidatus Lariskella 0.00 1 1 G1 2632605 unclassified Candidatus Lariskella 0.03 18 0 O 362534 Kordiimonadales 0.03 17 0 F 1549128 Temperatibacteraceae 0.03 16 0 G 1549129 Temperatibacter 0.03 16 16 S 1456591 Temperatibacter marinus 0.00 1 0 G 3058346 Gimibacter 0.00 1 1 S 3024400 Gimibacter soli 0.00 1 0 F 1331809 Kordiimonadaceae 0.00 1 0 G 288021 Kordiimonas 0.00 1 0 G1 2618732 unclassified Kordiimonas 0.00 1 1 S 2829597 Kordiimonas sp. SCSIO 12610 0.03 14 0 O 2800060 Hyphomonadales 0.03 14 0 F 69657 Hyphomonadaceae 0.01 7 3 G 85 Hyphomonas 0.01 4 0 G1 2630699 unclassified Hyphomonas 0.01 4 4 S 1873716 Hyphomonas sp. CACIAM 19H1 0.01 6 0 G 2892997 Candidatus Viadribacter 0.01 6 6 S 1759059 Candidatus Viadribacter manganicus 0.00 1 0 G 2723 Hirschia 0.00 1 0 S 2724 Hirschia baltica 0.00 1 1 S1 582402 Hirschia baltica ATCC 49814 0.02 11 0 O 2066490 Emcibacterales 0.02 11 0 F 2066491 Emcibacteraceae 0.02 11 0 G 2943291 Pseudemcibacter 0.02 11 11 S 2857064 Pseudemcibacter aquimaris 0.01 3 0 O 3108222 Geminicoccales 0.01 3 0 F 2066434 Geminicoccaceae 0.01 3 0 G 171436 Tistrella 0.01 3 0 S 171437 Tistrella mobilis 0.01 3 3 S1 1110502 Tistrella mobilis KA081020-065 0.00 2 0 O 54526 Candidatus Pelagibacterales 0.00 2 0 F 1655514 Candidatus Pelagibacteraceae 0.00 2 1 G 198251 Candidatus Pelagibacter 0.00 1 0 G1 2647897 unclassified Candidatus Pelagibacter 0.00 1 1 S 1977865 Candidatus Pelagibacter sp. RS40 0.00 1 0 O 255473 Parvularculales 0.00 1 0 F 255474 Parvularculaceae 0.00 1 0 G 1795639 Aquisalinus 0.00 1 1 S 1526572 Aquisalinus flavus 0.00 1 0 O 510684 Sneathiellales 0.00 1 0 F 510685 Sneathiellaceae 0.00 1 0 G 510690 Sneathiella 0.00 1 1 S 2950108 Sneathiella marina 0.00 1 0 O 1191478 Magnetococcales 0.00 1 0 F 1191479 Magnetococcaceae 0.00 1 0 G 162171 Magnetococcus 0.00 1 0 S 1124597 Magnetococcus marinus 0.00 1 1 S1 156889 Magnetococcus marinus MC-1 0.00 1 0 O 2800059 Maricaulales 0.00 1 1 F 2800061 Maricaulaceae 4.16 2301 49 C 28216 Betaproteobacteria 3.40 1882 46 O 80840 Burkholderiales 1.79 992 337 F 119060 Burkholderiaceae 0.48 267 172 G 32008 Burkholderia 0.10 58 0 G1 111527 pseudomallei group 0.08 45 14 S 28450 Burkholderia pseudomallei 0.03 14 14 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.02 10 10 S1 1249470 Burkholderia pseudomallei MSHR1079 0.01 3 3 S1 1437000 Burkholderia pseudomallei MSHR1153 0.00 2 2 S1 1249473 Burkholderia pseudomallei MSHR491 0.00 2 2 S1 557724 Burkholderia pseudomallei 576 0.01 8 4 S 57975 Burkholderia thailandensis 0.00 2 2 S1 271848 Burkholderia thailandensis E264 0.00 1 1 S1 1249663 Burkholderia thailandensis H0587 0.00 1 1 S1 1249664 Burkholderia thailandensis 34 0.01 4 4 S 13373 Burkholderia mallei 0.00 1 1 S 342113 Burkholderia oklahomensis 0.05 30 5 G1 87882 Burkholderia cepacia complex 0.01 6 6 S 87883 Burkholderia multivorans 0.01 5 5 S 152480 Burkholderia ambifaria 0.01 4 4 S 179879 Burkholderia anthina 0.01 3 0 S 95486 Burkholderia cenocepacia 0.01 3 3 S1 1055524 Burkholderia cenocepacia H111 0.01 3 0 S 101571 Burkholderia ubonensis 0.00 2 2 S1 1249668 Burkholderia ubonensis MSMB22 0.00 1 1 S1 265293 Burkholderia ubonensis subsp. mesacidophila 0.00 1 1 S 60552 Burkholderia vietnamiensis 0.00 1 1 S 95485 Burkholderia stabilis 0.00 1 1 S 152500 Burkholderia dolosa 0.00 1 1 S 488447 Burkholderia contaminans 0.01 6 0 G1 2613784 unclassified Burkholderia 0.01 3 3 S 2906514 Burkholderia sp. S-53 0.01 3 3 S 1494466 Burkholderia sp. FERM BP-3421 0.00 1 1 S 28095 Burkholderia gladioli 0.18 99 0 G 2571160 Trinickia 0.18 99 99 S 28094 Trinickia caryophylli 0.17 95 95 G 131079 Limnobacter 0.17 92 2 G 48736 Ralstonia 0.15 81 0 G1 3116862 Ralstonia solanacearum species complex 0.14 78 78 S 305 Ralstonia solanacearum 0.01 3 3 S 1310165 Ralstonia pseudosolanacearum 0.02 9 0 G1 209769 unclassified Ralstonia 0.01 8 8 S 2880990 Ralstonia sp. RS650 0.00 1 1 S 2880988 Ralstonia sp. RS642 0.08 44 44 G 2571159 Mycetohabitans 0.03 18 14 G 106589 Cupriavidus 0.01 3 3 S 367825 Cupriavidus malaysiensis 0.00 1 1 S 119219 Cupriavidus metallidurans 0.03 15 15 G 44013 Polynucleobacter 0.02 11 6 G 1822464 Paraburkholderia 0.01 3 3 S 2571748 Paraburkholderia acidisoli 0.00 2 2 S 75105 Paraburkholderia caribensis 0.01 5 0 G 47670 Lautropia 0.01 5 5 S 47671 Lautropia mirabilis 0.01 3 3 G 2018044 Candidatus Vallotia 0.00 2 0 G 2038280 Robbsia 0.00 1 1 S 28092 Robbsia andropogonis 0.00 1 0 G1 2636574 unclassified Robbsia 0.00 1 1 S 3149231 Robbsia sp. KACC 23696 0.00 2 0 G 2680021 Ephemeroptericola 0.00 2 2 S 2268024 Ephemeroptericola cinctiostellae 0.00 1 1 G 1810868 Mycoavidus 0.00 1 1 G 1827195 Caballeronia 0.90 497 1 O1 224471 Burkholderiales genera incertae sedis 0.87 479 108 G 32012 Thiomonas 0.67 368 368 S 926 Thiomonas intermedia 0.01 3 0 G1 2625466 unclassified Thiomonas 0.01 3 3 S 2493107 Thiomonas sp. OC7 0.02 13 0 G 114248 Tepidimonas 0.02 13 13 S 307486 Tepidimonas taiwanensis 0.00 2 0 G 92793 Aquabacterium 0.00 1 1 S 1296669 Aquabacterium olei 0.00 1 0 G1 2620789 unclassified Aquabacterium 0.00 1 1 S 2898431 Aquabacterium sp. J223 0.00 1 0 G 212743 Rhizobacter 0.00 1 0 G1 2640088 unclassified Rhizobacter 0.00 1 1 S 2753607 Rhizobacter sp. AJA081-3 0.00 1 0 G 2929841 Candidatus Ichthyocystis 0.00 1 1 S 1561003 Candidatus Ichthyocystis hellenicum 0.27 152 20 F 80864 Comamonadaceae 0.11 61 42 G 47420 Hydrogenophaga 0.03 14 3 G1 2610897 unclassified Hydrogenophaga 0.01 8 8 S 2806347 Hydrogenophaga sp. SL48 0.00 2 2 S 2565558 Hydrogenophaga sp. PAMC20947 0.00 1 1 S 795665 Hydrogenophaga sp. PBC 0.01 3 3 S 65656 Hydrogenophaga taeniospiralis 0.00 1 0 G1 199682 environmental samples 0.00 1 1 S 199683 uncultured Hydrogenophaga sp. 0.00 1 1 S 2716225 Hydrogenophaga crocea 0.03 18 18 G 28065 Rhodoferax 0.03 18 8 G 283 Comamonas 0.01 5 5 S 2743470 Comamonas antarctica 0.00 1 1 S 285 Comamonas testosteroni 0.00 1 0 S 32013 Comamonas terrigena 0.00 1 1 S1 1219032 Comamonas terrigena NBRC 13299 0.00 1 1 S 225992 Comamonas kerstersii 0.00 1 1 S 363952 Comamonas thiooxydans 0.00 1 0 G1 2638500 unclassified Comamonas 0.00 1 1 S 2853257 Comamonas sp. Y33R10-2 0.01 6 0 G 352450 Simplicispira 0.01 6 6 S 2109915 Simplicispira suum 0.01 4 2 G 52972 Polaromonas 0.00 2 1 G1 2638319 unclassified Polaromonas 0.00 1 1 S 296591 Polaromonas sp. JS666 0.01 4 0 G 1436289 Candidatus Symbiobacter 0.01 4 0 S 1436290 Candidatus Symbiobacter mobilis 0.01 4 4 S1 946483 Candidatus Symbiobacter mobilis CR 0.01 4 0 G 174951 Ramlibacter 0.01 4 4 S 94132 Ramlibacter tataouinensis 0.01 3 3 G 12916 Acidovorax 0.01 3 0 G 665874 Limnohabitans 0.01 3 2 G1 2626134 unclassified Limnohabitans 0.00 1 1 S 1678129 Limnohabitans sp. 103DPR2 0.01 3 3 G 238749 Diaphorobacter 0.00 2 1 G 34072 Variovorax 0.00 1 1 G1 663243 unclassified Variovorax 0.00 2 0 G 232523 Hylemonella 0.00 2 2 S 80880 Hylemonella gracilis 0.00 1 1 G 2490452 Serpentinimonas 0.00 1 0 G 364316 Verminephrobacter 0.00 1 0 S 364317 Verminephrobacter eiseniae 0.00 1 1 S1 391735 Verminephrobacter eiseniae EF01-2 0.00 1 0 G 2919468 Vandammella 0.00 1 1 S 2029117 Vandammella animalimorsus 0.00 1 0 G 80865 Delftia 0.00 1 1 S 180282 Delftia tsuruhatensis 0.17 94 21 F 506 Alcaligenaceae 0.04 23 2 G 359336 Castellaniella 0.03 18 0 S 75697 Castellaniella defragrans 0.03 18 18 S1 1437824 Castellaniella defragrans 65Phen 0.01 3 0 G1 2617606 unclassified Castellaniella 0.01 3 3 S 3140381 Castellaniella sp. MT123 0.03 14 0 G 517 Bordetella 0.02 11 11 S 94624 Bordetella petrii 0.00 2 0 G1 2630031 unclassified Bordetella 0.00 2 2 S 1746199 Bordetella sp. N 0.00 1 1 S 123899 Bordetella trematum 0.02 10 7 G 222 Achromobacter 0.01 3 3 S 217204 Achromobacter insolitus 0.02 9 0 G 1921582 Orrella 0.01 6 6 S 1851544 Orrella dioscoreae 0.01 3 3 S 2782176 Orrella daihaiensis 0.01 5 0 G 2987605 Neopusillimonas 0.01 5 5 S 2979868 Neopusillimonas aromaticivorans 0.01 3 0 G 305976 Pusillimonas 0.01 3 0 G1 2640016 unclassified Pusillimonas 0.01 3 3 S 2716226 Pusillimonas sp. DMV24BSW_D 0.00 2 1 G 29574 Taylorella 0.00 1 1 S 29575 Taylorella equigenitalis 0.00 1 0 G 290425 Advenella 0.00 1 1 S 1481665 Advenella alkanexedens 0.00 1 0 G 1472344 Basilea 0.00 1 0 S 1472345 Basilea psittacipulmonis 0.00 1 1 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 1 0 G 1148163 Paralcaligenes 0.00 1 0 G1 2631622 unclassified Paralcaligenes 0.00 1 1 S 2901142 Paralcaligenes sp. KSB-10 0.00 1 0 G 152267 Pigmentiphaga 0.00 1 1 S 1940612 Pigmentiphaga aceris 0.00 1 0 G 106146 Pelistega 0.00 1 1 S 2652177 Pelistega ratti 0.00 1 0 G 90243 Oligella 0.00 1 1 S 90244 Oligella ureolytica 0.00 1 0 G 507 Alcaligenes 0.00 1 1 S 511 Alcaligenes faecalis 0.13 74 2 F 75682 Oxalobacteraceae 0.08 46 31 G 963 Herbaspirillum 0.03 15 15 S 92645 Herbaspirillum frisingense 0.03 15 2 F1 2895353 Telluria group 0.02 13 11 G 149698 Massilia 0.00 1 1 S 945844 Massilia oculi 0.00 1 0 G1 2609279 unclassified Massilia 0.00 1 1 S 1707785 Massilia sp. WG5 0.01 4 2 G 29580 Janthinobacterium 0.00 2 0 G1 2610881 unclassified Janthinobacterium 0.00 1 1 S 2497863 Janthinobacterium sp. 17J80-10 0.00 1 1 S 3065910 Janthinobacterium sp. J1-1 0.01 3 0 G 1344552 Noviherbaspirillum 0.01 3 0 G1 2617509 unclassified Noviherbaspirillum 0.01 3 3 S 2601898 Noviherbaspirillum sp. UKPF54 0.00 2 0 G 884214 Candidatus Zinderia 0.00 2 0 G1 3077950 unclassified Candidatus Zinderia 0.00 2 2 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.00 1 0 G 401469 Undibacterium 0.00 1 1 G1 2630295 unclassified Undibacterium 0.00 1 0 G 1051898 Actimicrobium 0.00 1 0 G1 2624959 unclassified Actimicrobium 0.00 1 1 S 3048606 Actimicrobium sp. CCC2.4 0.05 27 2 F 2975441 Sphaerotilaceae 0.01 7 4 G 196013 Caldimonas 0.01 3 3 S 376175 Schlegelella aquatica 0.01 6 1 G 34102 Sphaerotilus 0.01 3 3 S 639200 Sphaerotilus sulfidivorans 0.00 2 2 S 2914710 Sphaerotilus microaerophilus 0.01 5 0 G 1114981 Piscinibacter 0.01 3 0 G1 2627988 unclassified Piscinibacter 0.01 3 3 S 3037797 Piscinibacter sp. XHJ-5 0.00 2 2 S 946333 Piscinibacter gummiphilus 0.01 3 0 G 88 Leptothrix 0.01 3 0 S 34029 Leptothrix cholodnii 0.01 3 3 S1 395495 Leptothrix cholodnii SP-6 0.00 2 0 G 93681 Roseateles 0.00 1 0 G1 2626991 unclassified Roseateles 0.00 1 1 S 2995138 Roseateles sp. SL47 0.00 1 1 S 2978473 Roseateles amylovorans 0.00 1 0 G 391952 Aquincola 0.00 1 1 S 391953 Aquincola tertiaricarbonis 0.00 1 0 G 644355 Inhella 0.00 1 1 S 392593 Inhella inkyongensis 0.31 174 5 O 206389 Rhodocyclales 0.23 125 9 F 2008795 Azonexaceae 0.11 62 0 G 146936 Azonexus 0.11 62 62 S 418702 Azonexus hydrophilus 0.09 50 4 G 73029 Dechloromonas 0.06 32 32 S 281362 Dechloromonas denitrificans 0.03 14 0 G1 2633351 unclassified Dechloromonas 0.03 14 14 S 447588 Dechloromonas sp. A34 0.01 3 0 G 88875 Ferribacterium 0.01 3 3 S 76259 Ferribacterium limneticum 0.00 1 0 G 138117 Quatrionicoccus 0.00 1 1 S 138118 Quatrionicoccus australiensis 0.04 24 0 F 75787 Rhodocyclaceae 0.03 15 0 G 551759 Aromatoleum 0.03 15 15 S 76116 Aromatoleum petrolei 0.01 5 1 G 146937 Azospira 0.00 2 2 S 404405 Azospira restricta 0.00 2 2 S 2785627 Azospira inquinata 0.01 3 0 G 1911577 Oryzomicrobium 0.01 3 3 S 1735038 Oryzomicrobium terrae 0.00 1 0 G 1769726 Niveibacterium 0.00 1 1 S 2811415 Niveibacterium microcysteis 0.03 18 0 F 2808923 Fluviibacteraceae 0.03 18 0 G 2808942 Fluviibacter 0.03 18 18 S 1751046 Fluviibacter phosphoraccumulans 0.00 2 0 F 2008794 Zoogloeaceae 0.00 1 1 G 12960 Azoarcus 0.00 1 1 G 2891294 Nitrogeniibacter 0.26 143 12 O 32003 Nitrosomonadales 0.07 39 19 F 32011 Methylophilaceae 0.01 8 0 G 2872156 Methyloradius 0.01 8 8 S 2778876 Methyloradius palustris 0.01 7 0 G 1679002 Candidatus Methylopumilus 0.01 7 7 S 1581680 Candidatus Methylopumilus turicensis 0.01 3 1 G 16 Methylophilus 0.00 2 2 S 17 Methylophilus methylotrophus 0.00 1 1 G 81682 Methylovorus 0.00 1 0 G 359407 Methylotenera 0.00 1 0 S 359408 Methylotenera mobilis 0.00 1 1 S1 583345 Methylotenera mobilis JLW8 0.06 31 12 F 206379 Nitrosomonadaceae 0.03 18 16 G 914 Nitrosomonas 0.00 2 0 G1 2609265 unclassified Nitrosomonas 0.00 1 1 S 261292 Nitrosomonas sp. Is79A3 0.00 1 1 S 3070658 Nitrosomonas sp. sh817 0.00 1 1 G 35798 Nitrosospira 0.04 21 0 F 2008790 Thiobacillaceae 0.02 12 8 G 919 Thiobacillus 0.01 4 0 G1 2646513 unclassified Thiobacillus 0.01 3 3 S 3110231 Thiobacillus sp. SCUT-2 0.00 1 1 S 924 Thiobacillus sp. 0.02 9 0 G 1938335 Sulfuritortus 0.02 9 9 S 1914471 Sulfuritortus calidifontis 0.03 18 1 F 2008793 Sterolibacteriaceae 0.01 7 6 G 3050898 Sulfuricystis 0.00 1 1 S 2211108 Sulfuricystis multivorans 0.01 3 0 G 157591 Sterolibacterium 0.01 3 3 S 157592 Sterolibacterium denitrificans 0.01 3 0 G 1054211 Sulfuritalea 0.01 3 0 S 748811 Sulfuritalea hydrogenivorans 0.01 3 3 S1 1223802 Sulfuritalea hydrogenivorans sk43H 0.00 2 0 G 378210 Methyloversatilis 0.00 2 0 G1 2639971 unclassified Methyloversatilis 0.00 2 2 S 1842540 Methyloversatilis sp. RAC08 0.00 1 1 G 311181 Denitratisoma 0.00 1 0 G 1914449 Rugosibacter 0.00 1 1 S 1565605 Rugosibacter aromaticivorans 0.02 10 0 F 2772226 Sulfuricellaceae 0.02 9 6 G 1778653 Sulfuriferula 0.01 3 3 S 171865 Sulfuriferula plumbiphila 0.00 1 0 G 2772198 Sulfurimicrobium 0.00 1 1 S 2715678 Sulfurimicrobium lacus 0.01 8 1 F 90627 Gallionellaceae 0.01 3 0 G 2249462 Ferrigenium 0.01 3 3 S 1682490 Ferrigenium kumadai 0.00 2 2 G 453161 Candidatus Nitrotoga 0.00 2 0 G 1443590 Ferriphaselus 0.00 2 2 S 1188319 Ferriphaselus amnicola 0.01 4 0 F 2803844 Usitatibacteraceae 0.01 4 3 G 2803845 Usitatibacter 0.00 1 1 S 2732487 Usitatibacter palustris 0.07 38 3 O 206351 Neisseriales 0.04 24 5 F 481 Neisseriaceae 0.02 13 1 G 482 Neisseria 0.01 5 0 G1 2623750 unclassified Neisseria 0.01 5 5 S 2912675 Neisseria sp. Dent CA1/247 0.01 3 3 S 485 Neisseria gonorrhoeae 0.01 3 3 S 487 Neisseria meningitidis 0.00 1 1 S 486 Neisseria lactamica 0.01 4 0 G 2593687 Aquella 0.01 4 4 S 2067065 Aquella oligotrophica 0.00 2 0 G 59 Vitreoscilla 0.00 2 2 S 63 Vitreoscilla filiformis 0.01 5 0 F 2897176 Aquaspirillaceae 0.00 2 0 G 187 Aquaspirillum 0.00 2 0 G1 2620219 unclassified Aquaspirillum 0.00 2 2 S 1938604 Aquaspirillum sp. LM1 0.00 2 0 G 168470 Laribacter 0.00 2 2 S 168471 Laribacter hongkongensis 0.00 1 0 G 57479 Microvirgula 0.00 1 1 S 57480 Microvirgula aerodenitrificans 0.01 5 0 F 2897177 Chitinibacteraceae 0.00 2 0 G 240411 Chitinimonas 0.00 2 2 S 2594795 Chitinimonas arctica 0.00 2 2 G 400947 Deefgea 0.00 1 0 G 885864 Jeongeupia 0.00 1 1 G1 2619593 unclassified Jeongeupia 0.00 1 0 F 1499392 Chromobacteriaceae 0.00 1 1 G 400060 Paludibacterium 0.03 15 0 C1 119066 Betaproteobacteria incertae sedis 0.02 11 0 F 2705999 Casimicrobiaceae 0.02 11 0 G 2706000 Casimicrobium 0.02 11 11 S 2591109 Casimicrobium huifangae 0.01 4 3 G 33055 Candidatus Kinetoplastibacterium 0.00 1 1 S 33056 Candidatus Kinetoplastibacterium crithidii 0.00 1 0 C 1807140 Acidithiobacillia 0.00 1 0 O 225057 Acidithiobacillales 0.00 1 0 F 225058 Acidithiobacillaceae 0.00 1 1 G 119977 Acidithiobacillus 6.35 3516 0 P 57723 Acidobacteriota 6.34 3510 0 C 204432 Terriglobia 6.34 3506 4 O 204433 Terriglobales 6.32 3495 752 F 204434 Acidobacteriaceae 4.72 2614 39 G 392733 Terriglobus 4.50 2487 3 S 392734 Terriglobus roseus 4.49 2484 2484 S1 926566 Terriglobus roseus DSM 18391 0.16 88 0 S 870903 Terriglobus saanensis 0.16 88 88 S1 401053 Terriglobus saanensis SP1PR4 0.11 60 0 G 1742983 Occallatibacter 0.11 60 60 S 1002689 Occallatibacter riparius 0.06 33 1 G 940557 Granulicella 0.03 19 0 G1 2621151 unclassified Granulicella 0.02 12 12 S 2602070 Granulicella sp. WH15 0.01 7 7 S 1617967 Granulicella sp. 5B5 0.02 13 0 S 940615 Granulicella tundricola 0.02 13 13 S1 1198114 Granulicella tundricola MP5ACTX9 0.03 18 0 G 33973 Acidobacterium 0.03 18 0 S 33075 Acidobacterium capsulatum 0.03 18 18 S1 240015 Acidobacterium capsulatum ATCC 51196 0.01 8 0 G 3154218 Tunturibacter 0.01 8 8 S 3069689 Tunturibacter gelidoferens 0.01 5 0 G 1078829 Telmatobacter 0.01 5 0 G1 2634852 unclassified Telmatobacter 0.01 5 5 S 3036704 Telmatobacter sp. DSM 110680 0.00 2 0 G 388463 Edaphobacter 0.00 2 2 G1 2637509 unclassified Edaphobacter 0.00 2 0 G 2608728 Acidisarcina 0.00 2 2 S 2211140 Acidisarcina polymorpha 0.00 1 0 G 2951993 Alloacidobacterium 0.00 1 1 S 2763107 Alloacidobacterium dinghuense 0.01 7 0 F 3121618 Candidatus Korobacteraceae 0.01 7 0 G 658061 Candidatus Korobacter 0.01 7 0 S 658062 Candidatus Korobacter versatilis 0.01 7 7 S1 204669 Candidatus Koribacter versatilis Ellin345 0.01 4 0 O 332160 Bryobacterales 0.01 4 0 F 1962910 Bryobacteraceae 0.01 4 4 G 1649475 Paludibaculum 0.01 3 0 C 533205 Holophagae 0.01 3 0 O 574975 Holophagales 0.01 3 0 F 574976 Holophagaceae 0.00 2 1 G 44675 Geothrix 0.00 1 1 G1 2647902 unclassified Geothrix 0.00 1 0 G 35838 Holophaga 0.00 1 0 G1 89282 environmental samples 0.00 1 1 S 188475 uncultured Holophaga sp. 0.01 3 0 C 1813735 Vicinamibacteria 0.01 3 0 O 2910145 Vicinamibacterales 0.01 3 0 F 2211325 Vicinamibacteraceae 0.01 3 2 G 2004797 Luteitalea 0.00 1 0 G1 2626009 unclassified Luteitalea 0.00 1 1 S 2802971 Luteitalea sp. TBR-22 0.86 476 10 D1 1783272 Terrabacteria group 0.43 240 2 P 1239 Bacillota 0.36 199 1 C 91061 Bacilli 0.29 162 8 O 1385 Bacillales 0.09 50 1 F 186822 Paenibacillaceae 0.08 43 14 G 44249 Paenibacillus 0.02 9 9 S 1178515 Paenibacillus swuensis 0.01 8 0 G1 185978 unclassified Paenibacillus 0.01 4 4 S 2996034 Paenibacillus sp. SYP-B4298 0.00 2 2 S 1306526 Paenibacillus sp. HWE-109 0.00 1 1 S 2918901 Paenibacillus sp. MBLB1832 0.00 1 1 S 2954512 Paenibacillus sp. FSL K6-1122 0.01 6 6 S 2918900 Paenibacillus aurantius 0.00 2 2 S 682956 Paenibacillus jilunlii 0.00 2 2 S 61624 Paenibacillus mucilaginosus 0.00 1 1 S 1712516 Paenibacillus baekrokdamisoli 0.00 1 1 S 2704463 Paenibacillus rhizovicinus 0.01 4 1 G 329857 Cohnella 0.00 2 2 S 2598458 Cohnella cholangitidis 0.00 1 0 G1 2636738 unclassified Cohnella 0.00 1 1 S 1619153 Cohnella sp. LGH 0.00 1 0 G 55080 Brevibacillus 0.00 1 0 G1 2684853 unclassified Brevibacillus 0.00 1 1 S 319501 Brevibacillus sp. WF146 0.00 1 0 F1 85151 Aneurinibacillus group 0.00 1 1 G 55079 Aneurinibacillus 0.08 46 0 F 186823 Alicyclobacillaceae 0.08 46 0 G 29330 Alicyclobacillus 0.04 22 22 S 2931921 Alicyclobacillus mengziensis 0.04 20 0 G1 2622400 unclassified Alicyclobacillus 0.03 18 18 S 2665646 Alicyclobacillus sp. SO9 0.00 1 1 S 2606450 Alicyclobacillus sp. TC 0.00 1 1 S 2796143 Alicyclobacillus sp. ALC3 0.01 4 4 S 1457 Alicyclobacillus cycloheptanicus 0.08 42 1 F 186817 Bacillaceae 0.05 26 15 G 150247 Anoxybacillus 0.02 9 0 S 33934 Anoxybacillus flavithermus 0.02 9 9 S1 491915 Anoxybacillus flavithermus WK1 0.00 2 2 G1 2639704 unclassified Anoxybacillus 0.01 5 1 G 1386 Bacillus 0.00 2 0 G1 86661 Bacillus cereus group 0.00 1 0 S 1405 Bacillus mycoides 0.00 1 1 S1 315730 Bacillus mycoides KBAB4 0.00 1 0 S 1428 Bacillus thuringiensis 0.00 1 0 S1 29339 Bacillus thuringiensis serovar kurstaki 0.00 1 1 S2 1279365 Bacillus thuringiensis serovar kurstaki str. HD73 0.00 1 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.00 1 1 S 2874284 Bacillus sp. CRB-7 0.00 1 0 G1 653685 Bacillus subtilis group 0.00 1 0 G2 1938374 Bacillus amyloliquefaciens group 0.00 1 1 S 492670 Bacillus velezensis 0.01 5 5 G 129337 Geobacillus 0.00 2 0 G 2675229 Peribacillus 0.00 2 2 S 228899 Peribacillus asahii 0.00 2 1 G 2800373 Priestia 0.00 1 1 S 412384 Priestia aryabhattai 0.00 1 0 G 2675232 Neobacillus 0.00 1 0 G1 2675272 unclassified Neobacillus 0.00 1 1 S 3070676 Neobacillus sp. PS2-9 0.02 10 0 F 90964 Staphylococcaceae 0.01 8 0 G 1279 Staphylococcus 0.01 3 3 S 1280 Staphylococcus aureus 0.00 2 2 S 1290 Staphylococcus hominis 0.00 1 1 S 1283 Staphylococcus haemolyticus 0.00 1 1 S 29378 Staphylococcus arlettae 0.00 1 1 S 985002 Staphylococcus argenteus 0.00 2 0 G 45669 Salinicoccus 0.00 2 0 G1 2628837 unclassified Salinicoccus 0.00 2 2 S 3136731 Salinicoccus sp. Bachu38 0.01 3 0 F 186820 Listeriaceae 0.01 3 3 G 1637 Listeria 0.01 3 0 O1 539002 Bacillales incertae sedis 0.01 3 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.01 3 3 G 33986 Exiguobacterium 0.07 36 0 O 186826 Lactobacillales 0.05 28 0 F 81852 Enterococcaceae 0.05 28 0 G 1350 Enterococcus 0.05 28 26 S 1351 Enterococcus faecalis 0.00 2 2 S1 1201292 Enterococcus faecalis ATCC 29212 0.01 6 1 F 33958 Lactobacillaceae 0.00 2 1 G 2767887 Ligilactobacillus 0.00 1 1 S 89059 Ligilactobacillus acidipiscis 0.00 1 0 G 1253 Pediococcus 0.00 1 0 G1 1670797 Pediococcus acidilactici group 0.00 1 1 S 1254 Pediococcus acidilactici 0.00 1 1 G 1243 Leuconostoc 0.00 1 0 G 2759736 Lacticaseibacillus 0.00 1 1 S 47715 Lacticaseibacillus rhamnosus 0.00 1 0 F 1300 Streptococcaceae 0.00 1 1 G 1301 Streptococcus 0.00 1 0 F 186827 Aerococcaceae 0.00 1 0 G 2862144 Ruoffia 0.00 1 1 S 87458 Ruoffia tabacinasalis 0.06 33 4 C 186801 Clostridia 0.03 18 0 O 186802 Eubacteriales 0.01 7 0 F 31979 Clostridiaceae 0.01 7 2 G 1485 Clostridium 0.00 1 0 G1 2614128 unclassified Clostridium 0.00 1 1 S 2930219 Clostridium sp. BJN0001 0.00 1 1 S 46867 Clostridium chauvoei 0.00 1 1 S 29341 Clostridium argentinense 0.00 1 1 S 1561 Clostridium baratii 0.00 1 1 S 1520 Clostridium beijerinckii 0.01 5 0 F 216572 Oscillospiraceae 0.01 3 0 G 1263 Ruminococcus 0.00 2 2 G1 2608920 unclassified Ruminococcus 0.00 1 1 S 2564099 Ruminococcus bovis 0.00 1 0 G 2304687 Petroclostridium 0.00 1 0 G1 2619260 unclassified Petroclostridium 0.00 1 1 S 3045146 Petroclostridium sp. X23 0.00 1 0 G 1637257 Mageeibacillus 0.00 1 0 S 884684 Mageeibacillus indolicus 0.00 1 1 S1 699246 Mageeibacillus indolicus UPII9-5 0.00 2 0 F 186807 Peptococcaceae 0.00 1 0 G 2282741 Desulfofundulus 0.00 1 0 S 58135 Desulfofundulus kuznetsovii 0.00 1 1 S1 760568 Desulfofundulus kuznetsovii DSM 6115 0.00 1 1 G 2916693 Desulforamulus 0.00 1 1 F 31984 Heliobacteriaceae 0.00 1 0 F 68298 Syntrophomonadaceae 0.00 1 0 G 129001 Syntrophothermus 0.00 1 0 S 86170 Syntrophothermus lipocalidus 0.00 1 1 S1 643648 Syntrophothermus lipocalidus DSM 12680 0.00 1 1 F 186806 Eubacteriaceae 0.00 1 0 F 3046368 Aristaeellaceae 0.00 1 0 G 3046369 Aristaeella 0.00 1 1 S 3046382 Aristaeella hokkaidonensis 0.01 6 0 O 3082720 Peptostreptococcales 0.01 3 0 F 186804 Peptostreptococcaceae 0.01 3 0 G 1870884 Clostridioides 0.01 3 3 S 1496 Clostridioides difficile 0.00 2 0 F 3118656 Natronincolaceae 0.00 1 0 G 114627 Alkaliphilus 0.00 1 0 S 208226 Alkaliphilus metalliredigens 0.00 1 1 S1 293826 Alkaliphilus metalliredigens QYMF 0.00 1 0 G 1890059 Serpentinicella 0.00 1 1 S 1734049 Serpentinicella alkaliphila 0.00 1 0 F 3030910 Anaerovoracaceae 0.00 1 0 G 2060094 Aminipila 0.00 1 1 S 433296 Aminipila butyrica 0.01 4 0 O 3085636 Lachnospirales 0.01 4 1 F 186803 Lachnospiraceae 0.00 1 0 G 2163168 Kineothrix 0.00 1 0 G1 2625420 unclassified Kineothrix 0.00 1 1 S 3070215 Kineothrix sp. MB12-C1 0.00 1 0 G 2316020 Mediterraneibacter 0.00 1 1 S 33038 Mediterraneibacter gnavus 0.00 1 0 G 572511 Blautia 0.00 1 0 S 53443 Blautia hydrogenotrophica 0.00 1 1 S1 476272 Blautia hydrogenotrophica DSM 10507 0.00 1 0 O 53433 Halanaerobiales 0.00 1 0 F 53434 Halobacteroidaceae 0.00 1 0 G 42417 Halobacteroides 0.00 1 0 S 42422 Halobacteroides halobius 0.00 1 1 S1 748449 Halobacteroides halobius DSM 5150 0.01 4 0 C 1737404 Tissierellia 0.01 4 0 O 1737405 Tissierellales 0.01 3 0 F 1570339 Peptoniphilaceae 0.00 2 0 G 165779 Anaerococcus 0.00 2 2 S 1755241 Anaerococcus nagyae 0.00 1 0 G 1161127 Murdochiella 0.00 1 1 S 1852373 Murdochiella vaginalis 0.00 1 0 F 1737406 Tissierellaceae 0.00 1 0 G 2692382 Gudongella 0.00 1 1 S 1582259 Gudongella oleilytica 0.00 2 0 C 909932 Negativicutes 0.00 2 0 O 909929 Selenomonadales 0.00 2 0 F 1843490 Sporomusaceae 0.00 1 0 G 81463 Anaeromusa 0.00 1 0 G1 673272 environmental samples 0.00 1 1 S 673273 uncultured Anaeromusa sp. 0.00 1 1 G 365348 Pelosinus 0.29 163 0 P 201174 Actinomycetota 0.26 145 7 C 1760 Actinomycetes 0.14 79 2 O 85006 Micrococcales 0.13 70 48 F 85023 Microbacteriaceae 0.01 4 2 G 33877 Agromyces 0.00 2 2 S 1858653 Agromyces mangrovi 0.01 4 0 F1 1655488 Luna cluster 0.01 4 0 F2 1655489 Luna-1 subcluster 0.00 2 0 G 529881 Aquiluna 0.00 2 2 S 2499157 Aquiluna borgnonia 0.00 2 0 G 529883 Rhodoluna 0.00 2 2 S 535712 Candidatus Rhodoluna planktonica 0.01 3 3 G 33882 Microbacterium 0.01 3 0 G 1759331 Cnuibacter 0.01 3 3 S 1619308 Cnuibacter physcomitrellae 0.01 3 3 G 1705353 Aurantimicrobium 0.00 2 0 G 3108736 Antiquaquibacter 0.00 2 2 S 2880260 Antiquaquibacter oligotrophicus 0.00 2 0 G 120212 Subtercola 0.00 2 2 S 2895559 Subtercola endophyticus 0.00 1 0 G 1857011 Lysinibacter 0.00 1 0 G1 2619652 unclassified Lysinibacter 0.00 1 1 S 3031408 Lysinibacter sp. HNR 0.01 3 1 F 85021 Intrasporangiaceae 0.00 2 0 G 267408 Arsenicicoccus 0.00 2 0 G1 2663846 unclassified Arsenicicoccus 0.00 2 2 S 1658671 Arsenicicoccus sp. oral taxon 190 0.01 3 2 F 1268 Micrococcaceae 0.00 1 0 G 1663 Arthrobacter 0.00 1 0 G1 235627 unclassified Arthrobacter 0.00 1 1 S 2828862 Arthrobacter sp. Helios 0.00 1 0 F 85019 Brevibacteriaceae 0.00 1 1 G 1696 Brevibacterium 0.06 35 0 O 85007 Mycobacteriales 0.03 15 0 F 85026 Gordoniaceae 0.03 15 15 G 2053 Gordonia 0.02 13 0 F 1653 Corynebacteriaceae 0.02 13 5 G 1716 Corynebacterium 0.01 6 6 S 679663 Corynebacterium canis 0.00 1 1 S 322009 Corynebacterium cyclohexanicum 0.00 1 1 S 2080740 Corynebacterium yudongzhengii 0.01 7 5 F 1762 Mycobacteriaceae 0.00 1 0 G 1763 Mycobacterium 0.00 1 0 G1 77643 Mycobacterium tuberculosis complex 0.00 1 1 S 1773 Mycobacterium tuberculosis 0.00 1 1 G 1866885 Mycolicibacterium 0.01 6 0 O 1643682 Geodermatophilales 0.01 6 0 F 85030 Geodermatophilaceae 0.01 6 0 G 38501 Blastococcus 0.01 5 0 G1 2619396 unclassified Blastococcus 0.01 4 4 S 3144973 Blastococcus sp. HT6-4 0.00 1 1 S 3144843 Blastococcus sp. HT6-30 0.00 1 1 S 1564165 Blastococcus brunescens 0.01 5 0 O 85011 Kitasatosporales 0.01 5 0 F 2062 Streptomycetaceae 0.01 5 0 G 1883 Streptomyces 0.01 3 0 G1 2839105 Streptomyces violaceusniger group 0.01 3 3 S 1226757 Streptomyces rapamycinicus 0.00 1 1 S 249567 Streptomyces decoyicus 0.00 1 0 G1 1477431 Streptomyces albidoflavus group 0.00 1 1 S 1886 Streptomyces albidoflavus 0.01 4 1 O 85009 Propionibacteriales 0.01 3 2 F 85015 Nocardioidaceae 0.00 1 0 G 116071 Micropruina 0.00 1 1 S 75385 Micropruina glycogenica 0.01 3 1 O 85012 Streptosporangiales 0.00 2 0 F 2012 Thermomonosporaceae 0.00 1 0 G 2019 Thermomonospora 0.00 1 0 S 2020 Thermomonospora curvata 0.00 1 1 S1 471852 Thermomonospora curvata DSM 43183 0.00 1 0 G 667113 Actinoallomurus 0.00 1 0 G1 2624323 unclassified Actinoallomurus 0.00 1 1 S 2903557 Actinoallomurus sp. NBC_01490 0.00 2 0 O 85004 Bifidobacteriales 0.00 2 0 F 31953 Bifidobacteriaceae 0.00 2 1 G 1678 Bifidobacterium 0.00 1 1 S 28026 Bifidobacterium pseudocatenulatum 0.00 2 0 O 85008 Micromonosporales 0.00 2 1 F 28056 Micromonosporaceae 0.00 1 1 G 1873 Micromonospora 0.00 2 0 O 85010 Pseudonocardiales 0.00 2 0 F 2070 Pseudonocardiaceae 0.00 2 2 G 65496 Actinoalloteichus 0.01 8 0 C 84992 Acidimicrobiia 0.01 8 0 O 84993 Acidimicrobiales 0.01 4 0 F 633392 Iamiaceae 0.00 2 0 G 3075137 Dermatobacter 0.00 2 2 S 2884263 Dermatobacter hominis 0.00 1 0 G 467975 Iamia 0.00 1 1 S 467976 Iamia majanohamensis 0.00 1 0 G 1648491 Aquihabitans 0.00 1 0 G1 2633173 unclassified Aquihabitans 0.00 1 1 S 2849779 Aquihabitans sp. G128 0.01 3 0 F 2448023 Ilumatobacteraceae 0.01 3 0 G 682522 Ilumatobacter 0.01 3 0 S 467094 Ilumatobacter coccineus 0.01 3 3 S1 1313172 Ilumatobacter coccineus YM16-304 0.00 1 0 F 84994 Acidimicrobiaceae 0.00 1 0 G 53634 Acidimicrobium 0.00 1 0 S 53635 Acidimicrobium ferrooxidans 0.00 1 1 S1 525909 Acidimicrobium ferrooxidans DSM 10331 0.01 5 0 C 84998 Coriobacteriia 0.01 4 0 O 84999 Coriobacteriales 0.01 3 0 F 1643824 Atopobiaceae 0.01 3 0 G 1380 Atopobium 0.01 3 0 G1 2643817 unclassified Atopobium 0.01 3 3 S 712157 Atopobium sp. oral taxon 416 0.00 1 0 F 84107 Coriobacteriaceae 0.00 1 0 G 33870 Coriobacterium 0.00 1 0 S 33871 Coriobacterium glomerans 0.00 1 1 S1 700015 Coriobacterium glomerans PW2 0.00 1 0 O 1643822 Eggerthellales 0.00 1 0 F 1643826 Eggerthellaceae 0.00 1 0 G 84108 Slackia 0.00 1 1 S 84110 Slackia heliotrinireducens 0.01 4 0 C 1497346 Thermoleophilia 0.00 2 0 O 588673 Solirubrobacterales 0.00 1 0 F 320583 Conexibacteraceae 0.00 1 0 G 191494 Conexibacter 0.00 1 0 G1 2627773 unclassified Conexibacter 0.00 1 1 S 2937801 Conexibacter sp. DBS9H8 0.00 1 0 F 2600303 Baekduiaceae 0.00 1 1 G 2600304 Baekduia 0.00 2 0 O 2843198 Miltoncostaeales 0.00 2 0 F 2843199 Miltoncostaeaceae 0.00 2 0 G 2843200 Miltoncostaea 0.00 2 2 S 2843215 Miltoncostaea marina 0.00 1 0 C 908620 Nitriliruptoria 0.00 1 0 O 1755823 Egicoccales 0.00 1 0 F 1755824 Egicoccaceae 0.00 1 0 G 1755825 Egicoccus 0.00 1 1 S 1670830 Egicoccus halophilus 0.07 36 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.07 36 1 P 1117 Cyanobacteriota 0.06 35 2 C 3028117 Cyanophyceae 0.03 19 0 O 3079749 Leptolyngbyales 0.03 19 0 F 1890438 Leptolyngbyaceae 0.03 18 0 F1 3081713 Leptolyngbya group 0.03 18 0 G 47251 Leptolyngbya 0.03 16 0 G1 2650499 unclassified Leptolyngbya 0.03 16 16 S 2812896 Leptolyngbya sp. 7M 0.00 2 2 S 1184 Leptolyngbya boryana 0.00 1 0 G 2917830 Leptothermofonsia 0.00 1 0 S 2917832 Leptothermofonsia sichuanensis 0.00 1 1 S1 2016068 Leptothermofonsia sichuanensis E412 0.02 9 0 C1 1301283 Oscillatoriophycideae 0.01 5 0 O 1150 Oscillatoriales 0.01 4 0 F 1892254 Oscillatoriaceae 0.01 4 0 G 1158 Oscillatoria 0.01 3 0 S 482564 Oscillatoria nigro-viridis 0.01 3 3 S1 179408 Oscillatoria nigro-viridis PCC 7112 0.00 1 0 S 118323 Oscillatoria acuminata 0.00 1 1 S1 56110 Oscillatoria acuminata PCC 6304 0.00 1 0 F 1892252 Microcoleaceae 0.00 1 0 G 54304 Planktothrix 0.00 1 0 S 1160 Planktothrix agardhii 0.00 1 1 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 0.01 4 0 O 1118 Chroococcales 0.01 4 0 F 2815910 Geminocystaceae 0.00 2 2 G 102234 Cyanobacterium 0.00 2 1 G 669357 Geminocystis 0.00 1 0 G1 2625037 unclassified Geminocystis 0.00 1 1 S 1617448 Geminocystis sp. NIES-3709 0.01 5 1 O 1890424 Synechococcales 0.01 4 0 F 2881426 Prochlorococcaceae 0.01 4 0 G 167375 Cyanobium 0.01 3 0 S 59930 Cyanobium gracile 0.01 3 3 S1 292564 Cyanobium gracile PCC 6307 0.00 1 0 S 2304190 Cyanobium usitatum 0.00 1 1 S1 2116684 Cyanobium usitatum str. Tous 0.04 21 2 P 200795 Chloroflexota 0.03 14 0 C 292625 Anaerolineae 0.03 14 0 O 292629 Anaerolineales 0.03 14 0 F 292628 Anaerolineaceae 0.01 6 0 G 1649478 Pelolinea 0.01 6 6 S 913107 Pelolinea submarina 0.01 5 0 G 233189 Anaerolinea 0.01 5 0 S 167964 Anaerolinea thermophila 0.01 5 5 S1 926569 Anaerolinea thermophila UNI-1 0.01 3 0 G 2019482 Brevefilum 0.01 3 3 S 1986204 Brevefilum fermentans 0.00 2 0 C 32061 Chloroflexia 0.00 1 0 O 32064 Chloroflexales 0.00 1 0 O1 1508595 Roseiflexineae 0.00 1 0 F 1508635 Roseiflexaceae 0.00 1 1 G 120961 Roseiflexus 0.00 1 0 O 3139175 Candidatus Chloroheliales 0.00 1 0 F 3139177 Candidatus Chloroheliaceae 0.00 1 0 G 3139173 Candidatus Chlorohelix 0.00 1 1 S 3003348 Candidatus Chlorohelix allophototropha 0.00 2 0 C 2682225 Tepidiformia 0.00 2 0 O 2682226 Tepidiformales 0.00 2 0 F 2682227 Tepidiformaceae 0.00 2 1 G 2682228 Tepidiforma 0.00 1 1 S 3004094 Tepidiforma flava 0.00 1 0 C 2364196 Candidatus Thermofonsia 0.00 1 0 O 2364208 Phototrophicales 0.00 1 0 F 2922432 Phototrophicaceae 0.00 1 0 G 2922426 Phototrophicus 0.00 1 1 S 2710758 Phototrophicus methaneseepsis 0.01 5 0 P 544448 Mycoplasmatota 0.01 5 0 C 31969 Mollicutes 0.01 4 0 O 2085 Mycoplasmatales 0.01 3 0 F 2092 Mycoplasmataceae 0.01 3 3 G 2093 Mycoplasma 0.00 1 0 F 3132029 Candidatus Hepatoplasmataceae 0.00 1 0 G 295595 Candidatus Hepatoplasma 0.00 1 0 S 295596 Candidatus Hepatoplasma crinochetorum 0.00 1 1 S1 1427984 Candidatus Hepatoplasma crinochetorum Av 0.00 1 0 O 186329 Acholeplasmatales 0.00 1 0 F 2146 Acholeplasmataceae 0.00 1 0 G 2903106 Haploplasma 0.00 1 1 S 29552 Haploplasma axanthum 0.00 1 0 P 1297 Deinococcota 0.00 1 0 C 188787 Deinococci 0.00 1 0 O 118964 Deinococcales 0.00 1 0 F 183710 Deinococcaceae 0.00 1 0 G 1298 Deinococcus 0.00 1 0 S 432329 Deinococcus peraridilitoris 0.00 1 1 S1 937777 Deinococcus peraridilitoris DSM 19664 0.48 264 0 D1 1783270 FCB group 0.47 259 0 D2 68336 Bacteroidota/Chlorobiota group 0.45 249 3 P 976 Bacteroidota 0.14 78 0 C 1853228 Chitinophagia 0.14 78 0 O 1853229 Chitinophagales 0.14 78 5 F 563835 Chitinophagaceae 0.04 21 4 G 2698688 Paraflavitalea 0.03 17 17 S 2315862 Paraflavitalea soli 0.02 13 7 G 1004301 Flavihumibacter 0.01 6 6 S 2838157 Flavihumibacter fluvii 0.02 9 2 G 379899 Niabella 0.01 3 3 S 577386 Niabella yanshanensis 0.01 3 3 S 1176587 Niabella ginsenosidivorans 0.00 1 0 S 446683 Niabella soli 0.00 1 1 S1 929713 Niabella soli DSM 19437 0.01 6 0 G 504481 Sediminibacterium 0.01 6 1 G1 2635961 unclassified Sediminibacterium 0.01 4 4 S 575378 Sediminibacterium sp. TEGAF015 0.00 1 1 S 1751071 Sediminibacterium sp. KACHI17 0.01 6 0 G 1860196 Pseudobacter 0.01 6 6 S 661488 Pseudobacter ginsenosidimutans 0.01 5 4 G 1004303 Ferruginibacter 0.00 1 1 S 563172 Ferruginibacter lapsinanis 0.01 4 0 G 649461 Lacibacter 0.01 4 4 S 2760713 Lacibacter sediminis 0.01 3 0 G 398041 Flavisolibacter 0.01 3 3 S 661481 Flavisolibacter ginsenosidimutans 0.01 3 0 G 1649506 Thermoflavifilum 0.01 3 0 G1 3099314 unclassified Thermoflavifilum 0.01 3 3 S 1968839 Thermoflavifilum sp. 0.00 2 0 G 79328 Chitinophaga 0.00 2 2 G1 2619133 unclassified Chitinophaga 0.00 1 0 G 2812019 Pseudocnuella 0.00 1 1 S 2502779 Pseudocnuella soli 0.10 55 0 C 117747 Sphingobacteriia 0.10 55 0 O 200666 Sphingobacteriales 0.10 55 2 F 84566 Sphingobacteriaceae 0.07 39 23 G 28453 Sphingobacterium 0.02 11 11 G1 2609468 unclassified Sphingobacterium 0.01 3 3 S 1010 Sphingobacterium mizutaii 0.00 1 1 S 259 Sphingobacterium thalpophilum 0.00 1 1 S 28454 Sphingobacterium multivorum 0.02 9 4 G 84567 Pedobacter 0.01 4 4 S 2605747 Pedobacter aquae 0.00 1 1 S 188932 Pedobacter cryoconitis 0.01 5 0 G 423349 Mucilaginibacter 0.01 3 3 S 2740462 Mucilaginibacter mali 0.00 1 1 S 1173583 Mucilaginibacter sabulilitoris 0.00 1 1 S 2027860 Mucilaginibacter rubeus 0.08 45 0 C 117743 Flavobacteriia 0.08 45 1 O 200644 Flavobacteriales 0.05 29 3 F 49546 Flavobacteriaceae 0.03 15 5 G 237 Flavobacterium 0.01 3 1 G1 196869 unclassified Flavobacterium 0.00 1 1 S 2885633 Flavobacterium sp. N1719 0.00 1 1 S 2986838 Flavobacterium sp. N502540 0.00 2 2 S 2897181 Flavobacterium channae 0.00 2 2 S 683124 Flavobacterium haoranii 0.00 1 1 S 3003262 Flavobacterium limnophilum 0.00 1 1 S 2602769 Flavobacterium alkalisoli 0.00 1 1 S 1871076 Flavobacterium azooxidireducens 0.01 5 0 G 363408 Nonlabens 0.01 4 0 S 328515 Nonlabens dokdonensis 0.01 4 4 S1 592029 Nonlabens dokdonensis DSW-6 0.00 1 0 G1 2615035 unclassified Nonlabens 0.00 1 1 S 1336802 Nonlabens sp. Hel1_33_55 0.01 3 0 G 252356 Maribacter 0.01 3 3 S 1178778 Maribacter cobaltidurans 0.00 2 2 G 283735 Leeuwenhoekiella 0.00 1 0 G 326319 Dokdonia 0.00 1 0 G1 2615033 unclassified Dokdonia 0.00 1 1 S 983548 Dokdonia sp. 4H-3-7-5 0.02 13 1 F 2762318 Weeksellaceae 0.02 11 0 F1 2782232 Chryseobacterium group 0.01 8 0 G 59732 Chryseobacterium 0.01 4 4 S 1493872 Chryseobacterium shandongense 0.01 3 3 S 192389 Chryseobacterium daecheongense 0.00 1 1 S 2929800 Chryseobacterium suipulveris 0.01 3 0 G 2782231 Kaistella 0.01 3 3 S 2820270 Candidatus Kaistella beijingensis 0.00 1 1 G 501783 Cloacibacterium 0.00 2 0 F 39782 Blattabacteriaceae 0.00 2 2 G 34098 Blattabacterium 0.05 29 0 C 768503 Cytophagia 0.05 29 1 O 768507 Cytophagales 0.01 7 0 F 89373 Cytophagaceae 0.01 7 0 G 107 Spirosoma 0.01 5 5 S 2666025 Spirosoma endbachense 0.00 2 0 G1 2621999 unclassified Spirosoma 0.00 2 2 S 3128900 Spirosoma sp. SC4-14 0.01 5 0 F 563798 Cyclobacteriaceae 0.01 5 0 G 246875 Algoriphagus 0.01 5 1 G1 2641541 unclassified Algoriphagus 0.00 2 2 S 2705473 Algoriphagus sp. NBT04N3 0.00 2 2 S 2772483 Algoriphagus sp. Y33 0.01 4 0 F 2896860 Spirosomataceae 0.01 4 1 G 120831 Dyadobacter 0.00 2 2 S 2906456 Dyadobacter chenwenxiniae 0.00 1 0 S 94254 Dyadobacter fermentans 0.00 1 1 S1 471854 Dyadobacter fermentans DSM 18053 0.01 3 0 F 1853232 Hymenobacteraceae 0.01 3 2 G 89966 Hymenobacter 0.00 1 1 S 1411621 Hymenobacter sedentarius 0.01 3 0 F 3141701 Flectobacillaceae 0.01 3 2 G 2676247 Aquirufa 0.00 1 1 S 2516557 Aquirufa nivalisilvae 0.01 3 0 F 3141702 Leadbetterellaceae 0.00 2 0 G 312278 Emticicia 0.00 2 0 S 312279 Emticicia oligotrophica 0.00 2 2 S1 929562 Emticicia oligotrophica DSM 17448 0.00 1 0 G 2975149 Marinilongibacter 0.00 1 1 S 2975157 Marinilongibacter aquaticus 0.00 2 0 F 2762286 Fulvivirgaceae 0.00 2 0 G 1433993 Chryseolinea 0.00 2 2 S 2321403 Chryseolinea soli 0.00 1 0 F 1501348 Amoebophilaceae 0.00 1 0 G 281119 Candidatus Amoebophilus 0.00 1 0 S 281120 Candidatus Amoebophilus asiaticus 0.00 1 1 S1 452471 Candidatus Amoebophilus asiaticus 5a2 0.03 18 0 C 200643 Bacteroidia 0.03 17 0 O 171549 Bacteroidales 0.01 6 0 F 171551 Porphyromonadaceae 0.01 6 0 G 1159323 Macellibacteroides 0.01 6 0 G1 1243006 environmental samples 0.01 6 6 S 1243007 uncultured Macellibacteroides sp. 0.01 5 0 F 815 Bacteroidaceae 0.01 5 0 G 816 Bacteroides 0.01 4 4 S 818 Bacteroides thetaiotaomicron 0.00 1 1 S 817 Bacteroides fragilis 0.00 2 0 F 171552 Prevotellaceae 0.00 2 0 G 838 Prevotella 0.00 2 2 S 2801997 Prevotella herbatica 0.00 2 0 F 2005523 Paludibacteraceae 0.00 2 0 G 346096 Paludibacter 0.00 2 0 S 185300 Paludibacter propionicigenes 0.00 2 2 S1 694427 Paludibacter propionicigenes WB4 0.00 1 0 F 2005473 Muribaculaceae 0.00 1 1 G 2518495 Duncaniella 0.00 1 0 F 2005520 Dysgonomonadaceae 0.00 1 0 G 307628 Petrimonas 0.00 1 1 S 1642646 Petrimonas mucosa 0.00 1 0 O 1970189 Marinilabiliales 0.00 1 1 F 1471398 Prolixibacteraceae 0.03 15 0 P1 171558 Bacteroidetes incertae sedis 0.03 15 0 O 2923288 Candidatus Sulfidibacteriales 0.03 15 0 G 2923290 Candidatus Sulfidibacterium 0.03 15 15 S 2875962 Candidatus Sulfidibacterium hydrothermale 0.01 6 0 C 1937959 Saprospiria 0.01 6 0 O 1936988 Saprospirales 0.01 6 0 F 1937961 Haliscomenobacteraceae 0.01 6 0 G 2349 Haliscomenobacter 0.01 6 0 S 2350 Haliscomenobacter hydrossis 0.01 6 6 S1 760192 Haliscomenobacter hydrossis DSM 1100 0.01 8 0 P 1090 Chlorobiota 0.01 8 0 C 191410 Chlorobiia 0.01 8 0 O 191411 Chlorobiales 0.01 8 1 F 191412 Chlorobiaceae 0.01 7 0 F1 274493 Chlorobium/Pelodictyon group 0.01 7 0 G 1099 Pelodictyon 0.01 7 0 S 34090 Pelodictyon phaeoclathratiforme 0.01 7 7 S1 324925 Pelodictyon phaeoclathratiforme BU-1 0.00 1 0 P 1134404 Ignavibacteriota 0.00 1 0 C 795747 Ignavibacteria 0.00 1 0 O 795748 Ignavibacteriales 0.00 1 0 F 1334117 Melioribacteraceae 0.00 1 0 G 1134403 Melioribacter 0.00 1 0 S 1134405 Melioribacter roseus 0.00 1 1 S1 1191523 Melioribacter roseus P3M-2 0.00 1 0 P 1853220 Rhodothermota 0.00 1 0 C 1853222 Rhodothermia 0.00 1 1 O 1853224 Rhodothermales 0.01 5 0 P 142182 Gemmatimonadota 0.01 5 0 C 219685 Gemmatimonadia 0.01 5 0 O 219686 Gemmatimonadales 0.01 5 0 F 219687 Gemmatimonadaceae 0.01 4 0 G 173479 Gemmatimonas 0.00 2 2 S 1379270 Gemmatimonas phototrophica 0.00 2 2 S 2732249 Gemmatimonas groenlandica 0.00 1 0 G 1706036 Gemmatirosa 0.00 1 1 S 861299 Gemmatirosa kalamazoonensis 0.33 185 0 D1 1783257 PVC group 0.26 146 2 P 74201 Verrucomicrobiota 0.24 133 2 C 203494 Verrucomicrobiia 0.17 94 0 O 134621 Limisphaerales 0.17 94 0 F 3050006 Fontisphaeraceae 0.17 94 0 G 3050007 Fontisphaera 0.17 94 94 S 2974023 Fontisphaera persica 0.07 37 0 O 48461 Verrucomicrobiales 0.07 37 0 F 203557 Verrucomicrobiaceae 0.06 35 2 G 518753 Luteolibacter 0.06 32 0 G1 2637149 unclassified Luteolibacter 0.06 32 32 S 2995170 Luteolibacter sp. SL250 0.00 1 1 S 2728835 Luteolibacter luteus 0.00 2 0 G 2735 Verrucomicrobium 0.00 1 0 S 2736 Verrucomicrobium spinosum 0.00 1 1 S1 240016 Verrucomicrobium spinosum DSM 4136 = JCM 18804 0.00 1 0 G1 2625155 unclassified Verrucomicrobium 0.00 1 1 S 1882831 Verrucomicrobium sp. GAS474 0.02 10 0 C 414999 Opitutia 0.02 10 0 O 415000 Opitutales 0.02 10 9 F 134623 Opitutaceae 0.00 1 0 G 2892920 Synoicihabitans 0.00 1 1 S 2909285 Synoicihabitans lomoniglobus 0.00 1 0 C 1955630 Methylacidiphilae 0.00 1 0 O 717963 Methylacidiphilales 0.00 1 0 F 717964 Methylacidiphilaceae 0.00 1 1 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.05 29 0 P 203682 Planctomycetota 0.05 29 1 C 203683 Planctomycetia 0.03 16 0 O 2691354 Pirellulales 0.03 14 0 F 2691357 Pirellulaceae 0.01 5 0 G 2795775 Lignipirellula 0.01 5 5 S 2528010 Lignipirellula cremea 0.01 3 0 G 265487 Blastopirellula 0.01 3 0 G1 2647022 unclassified Blastopirellula 0.01 3 3 S 2943192 Blastopirellula sp. J2-11 0.00 2 0 G 2795605 Aureliella 0.00 2 2 S 2527968 Aureliella helgolandensis 0.00 1 0 G 123 Pirellula 0.00 1 0 S 125 Pirellula staleyi 0.00 1 1 S1 530564 Pirellula staleyi DSM 6068 0.00 1 1 G 265488 Rhodopirellula 0.00 1 0 G 1579505 Rubripirellula 0.00 1 1 S 1930273 Rubripirellula lacrimiformis 0.00 1 0 G 2807414 Anatilimnocola 0.00 1 1 S 2528021 Anatilimnocola aggregata 0.00 1 0 F 2691358 Thermoguttaceae 0.00 1 0 G 1676125 Thermogutta 0.00 1 1 S 1331910 Thermogutta terrifontis 0.00 1 0 F 2691359 Lacipirellulaceae 0.00 1 1 G 2691417 Lacipirellula 0.01 8 0 O 112 Planctomycetales 0.01 8 1 F 126 Planctomycetaceae 0.01 6 0 G 118 Planctomyces 0.01 6 0 G1 2648843 unclassified Planctomyces 0.01 5 5 S 1632864 Planctomyces sp. SH-PL14 0.00 1 1 S 1636152 Planctomyces sp. SH-PL62 0.00 1 0 G 2795780 Symmachiella 0.00 1 1 S 2527995 Symmachiella dynata 0.00 2 0 O 2691355 Gemmatales 0.00 2 1 F 1914233 Gemmataceae 0.00 1 0 G 113 Gemmata 0.00 1 1 S 114 Gemmata obscuriglobus 0.00 2 0 O 2691356 Isosphaerales 0.00 2 0 F 1763524 Isosphaeraceae 0.00 2 0 G 1763521 Paludisphaera 0.00 2 2 S 1387353 Paludisphaera borealis 0.01 7 0 P 204428 Chlamydiota 0.01 7 0 C 204429 Chlamydiia 0.01 7 0 O 1963360 Parachlamydiales 0.01 6 1 F 92713 Parachlamydiaceae 0.00 2 0 G 83551 Parachlamydia 0.00 2 0 S 83552 Parachlamydia acanthamoebae 0.00 2 2 S1 765952 Parachlamydia acanthamoebae UV-7 0.00 2 0 G 112987 Neochlamydia 0.00 2 0 G1 2643326 unclassified Neochlamydia 0.00 2 2 S 1353976 Neochlamydia sp. S13 0.00 1 1 G 282132 Candidatus Protochlamydia 0.00 1 0 F 689704 Candidatus Rhabdochlamydiaceae 0.00 1 0 G 292833 Candidatus Rhabdochlamydia 0.00 1 1 S 2720720 Candidatus Rhabdochlamydia oedothoracis 0.01 3 0 P 134625 Kiritimatiellota 0.01 3 0 C 2907184 Tichowtungiia 0.01 3 0 O 2907185 Tichowtungiales 0.01 3 0 F 2907186 Tichowtungiaceae 0.01 3 0 G 2907187 Tichowtungia 0.01 3 3 S 2697043 Tichowtungia aerotolerans 0.05 29 0 P 200940 Thermodesulfobacteriota 0.02 10 0 C 3031449 Desulfovibrionia 0.02 10 0 O 213115 Desulfovibrionales 0.01 7 1 F 194924 Desulfovibrionaceae 0.01 3 0 G 872 Desulfovibrio 0.01 3 3 S 876 Desulfovibrio desulfuricans 0.00 2 0 G 2910984 Solidesulfovibrio 0.00 2 0 S 345370 Solidesulfovibrio carbinoliphilus 0.00 2 2 S1 694327 Solidesulfovibrio carbinoliphilus subsp. oakridgensis 0.00 1 0 G 41707 Lawsonia 0.00 1 1 S 29546 Lawsonia intracellularis 0.01 3 0 F 213116 Desulfomicrobiaceae 0.01 3 3 G 898 Desulfomicrobium 0.02 10 0 C 3031651 Desulfuromonadia 0.01 6 0 O 3031668 Geobacterales 0.01 6 1 F 213422 Geobacteraceae 0.01 3 0 G 2910589 Geotalea 0.01 3 0 S 351604 Geotalea uraniireducens 0.01 3 3 S1 351605 Geotalea uraniireducens Rf4 0.00 1 0 G 115782 Trichlorobacter 0.00 1 1 S 313985 Trichlorobacter lovleyi 0.00 1 0 G 2651583 Geomonas 0.00 1 0 G1 2860296 unclassified Geomonas 0.00 1 1 S 2897342 Geomonas sp. RF6 0.01 4 0 O 69541 Desulfuromonadales 0.01 4 0 F 213421 Desulfuromonadaceae 0.01 4 0 G 890 Desulfuromonas 0.01 3 3 S 1603606 Desulfuromonas soudanensis 0.00 1 1 S 2802975 Desulfuromonas versatilis 0.01 3 0 C 3024418 Desulfobacteria 0.01 3 1 O 213118 Desulfobacterales 0.00 2 0 F 2931039 Desulfococcaceae 0.00 2 2 G 45654 Desulfonema 0.01 3 0 C 3031451 Desulfobulbia 0.01 3 0 O 3024411 Desulfobulbales 0.00 2 0 F 213121 Desulfobulbaceae 0.00 2 1 G 893 Desulfobulbus 0.00 1 0 G1 111746 environmental samples 0.00 1 1 S 239745 uncultured Desulfobulbus sp. 0.00 1 0 F 2886822 Desulfocapsaceae 0.00 1 0 G 53318 Desulfocapsa 0.00 1 0 S 65555 Desulfocapsa sulfexigens 0.00 1 1 S1 1167006 Desulfocapsa sulfexigens DSM 10523 0.00 1 0 C 67799 Thermodesulfobacteria 0.00 1 0 O 188710 Thermodesulfobacteriales 0.00 1 0 F 3031464 Thermodesulfatatoraceae 0.00 1 0 G 241192 Thermodesulfatator 0.00 1 0 S 171695 Thermodesulfatator indicus 0.00 1 1 S1 667014 Thermodesulfatator indicus DSM 15286 0.00 1 0 C 3024408 Syntrophobacteria 0.00 1 0 O 213462 Syntrophobacterales 0.00 1 1 F 213465 Syntrophobacteraceae 0.00 1 0 C 3031650 Desulfomonilia 0.00 1 0 O 3031657 Desulfomonilales 0.00 1 0 F 3031658 Desulfomonilaceae 0.00 1 0 G 2357 Desulfomonile 0.00 1 0 S 2358 Desulfomonile tiedjei 0.00 1 1 S1 706587 Desulfomonile tiedjei DSM 6799 0.05 28 0 P 508458 Synergistota 0.05 28 0 C 649775 Synergistia 0.05 28 0 O 649776 Synergistales 0.05 27 0 F 3029085 Aminithiophilaceae 0.05 27 0 G 3029078 Aminithiophilus 0.05 27 27 S 3029084 Aminithiophilus ramosus 0.00 1 0 F 649777 Synergistaceae 0.00 1 0 G 508459 Cloacibacillus 0.00 1 1 S 1197717 Cloacibacillus porcorum 0.03 19 0 P 29547 Campylobacterota 0.03 19 0 C 3031852 Epsilonproteobacteria 0.03 18 2 O 213849 Campylobacterales 0.02 13 1 F 2808963 Arcobacteraceae 0.02 10 1 G 28196 Arcobacter 0.01 6 0 S 1278212 Arcobacter suis 0.01 6 6 S1 663365 Arcobacter suis CECT 7833 0.00 2 2 S 1315211 Arcobacter aquimarinus 0.00 1 0 S 28199 Arcobacter nitrofigilis 0.00 1 1 S1 572480 Arcobacter nitrofigilis DSM 7299 0.00 2 2 G 2321111 Aliarcobacter 0.00 2 0 F 2771471 Sulfurimonadaceae 0.00 1 0 G 202746 Sulfurimonas 0.00 1 1 S 2590022 Sulfurimonas lithotrophica 0.00 1 0 G 286130 Sulfuricurvum 0.00 1 0 G1 2632390 unclassified Sulfuricurvum 0.00 1 1 S 1249480 Candidatus Sulfuricurvum sp. RIFRC-1 0.00 1 0 F 72293 Helicobacteraceae 0.00 1 1 G 209 Helicobacter 0.00 1 0 O 235899 Nautiliales 0.00 1 0 F 2795691 Nitratiruptoraceae 0.00 1 1 G 2795692 Nitrosophilus 0.03 16 0 P 40117 Nitrospirota 0.03 16 0 C 203693 Nitrospiria 0.03 16 0 O 189778 Nitrospirales 0.03 16 0 F 189779 Nitrospiraceae 0.03 16 2 G 1234 Nitrospira 0.02 12 12 S 2973512 Nitrospira tepida 0.00 2 2 S 42253 Nitrospira moscoviensis 0.01 6 0 D1 2323 Bacteria incertae sedis 0.01 6 0 D2 1783234 Bacteria candidate phyla 0.01 6 2 P 95818 Candidatus Saccharibacteria 0.01 4 0 C 2093818 Candidatus Saccharimonadia 0.00 2 0 O 2093819 Candidatus Nanosynbacterales 0.00 2 0 F 2093822 Candidatus Nanosynbacteraceae 0.00 2 0 G 2093823 Candidatus Nanosynbacter 0.00 2 2 S 2093824 Candidatus Nanosynbacter lyticus 0.00 2 0 O 2093825 Candidatus Saccharimonadales 0.00 2 0 F 2171986 Candidatus Saccharimonadaceae 0.00 2 0 G 1331051 Candidatus Saccharimonas 0.00 2 2 S 1332188 Candidatus Saccharimonas aalborgensis 0.01 4 0 P 3018035 Bdellovibrionota 0.00 2 0 C 1553900 Oligoflexia 0.00 2 0 O 2024973 Silvanigrellales 0.00 1 0 F 2024974 Silvanigrellaceae 0.00 1 0 G 2838409 Pigmentibacter 0.00 1 0 G1 2838410 unclassified Pigmentibacter 0.00 1 1 S 2976982 Pigmentibacter sp. JX0631 0.00 1 0 O1 2024980 Silvanigrellales incertae sedis 0.00 1 0 G 495819 Spirobacillus 0.00 1 1 S 495820 Spirobacillus cienkowskii 0.00 1 0 C 3031418 Bdellovibrionia 0.00 1 0 O 213481 Bdellovibrionales 0.00 1 0 F 213483 Pseudobdellovibrionaceae 0.00 1 0 G 213485 Micavibrio 0.00 1 1 S 349221 Micavibrio aeruginosavorus 0.00 1 0 C 3031419 Bacteriovoracia 0.00 1 0 O 2024979 Bacteriovoracales 0.00 1 0 F 263369 Bacteriovoracaceae 0.00 1 0 G 263370 Peredibacter 0.00 1 1 S 28202 Peredibacter starrii 0.01 3 0 P 2818505 Myxococcota 0.00 2 0 C 32015 Myxococcia 0.00 2 0 O 29 Myxococcales 0.00 2 0 O1 80811 Cystobacterineae 0.00 1 1 F 39 Archangiaceae 0.00 1 0 F 1524215 Anaeromyxobacteraceae 0.00 1 0 G 161492 Anaeromyxobacter 0.00 1 1 S 2918171 Anaeromyxobacter paludicola 0.00 1 0 P1 3031711 Polyangia 0.00 1 0 O 3031712 Polyangiales 0.00 1 0 F 49 Polyangiaceae 0.00 1 0 G 1882917 Pajaroellobacter 0.00 1 1 S 1882918 Pajaroellobacter abortibovis 0.00 2 0 P 203691 Spirochaetota 0.00 2 0 C 203692 Spirochaetia 0.00 1 0 O 136 Spirochaetales 0.00 1 0 F 1643685 Borreliaceae 0.00 1 0 G 64895 Borreliella 0.00 1 1 S 100177 Borreliella lusitaniae 0.00 1 0 O 1643688 Leptospirales 0.00 1 0 F 170 Leptospiraceae 0.00 1 0 G 338321 Turneriella 0.00 1 0 S 29510 Turneriella parva 0.00 1 1 S1 869212 Turneriella parva DSM 21527 0.00 1 0 D1 1802340 Nitrospinae/Tectomicrobia group 0.00 1 0 P 1293497 Nitrospinota 0.00 1 0 C 1293498 Nitrospinia 0.00 1 0 O 1293499 Nitrospinales 0.00 1 0 F 407032 Nitrospinaceae 0.00 1 0 G 35800 Nitrospina 0.00 1 1 S 1323948 Nitrospina watsonii 0.00 1 0 P 200930 Deferribacterota 0.00 1 0 C 68337 Deferribacteres 0.00 1 0 O 191393 Deferribacterales 0.00 1 0 F 2945021 Calditerrivibrionaceae 0.00 1 0 G 545865 Calditerrivibrio 0.00 1 0 S 477976 Calditerrivibrio nitroreducens 0.00 1 1 S1 768670 Calditerrivibrio nitroreducens DSM 19672 0.00 1 0 P 200918 Thermotogota 0.00 1 0 C 188708 Thermotogae 0.00 1 0 O 2419 Thermotogales 0.00 1 0 F 188709 Thermotogaceae 0.00 1 1 G 2335 Thermotoga 0.00 1 0 P 200783 Aquificota 0.00 1 0 C 187857 Aquificia 0.00 1 0 O 32069 Aquificales 0.00 1 1 F 64898 Aquificaceae