0.02 12 12 U 0 unclassified 99.98 59187 0 R 1 root 99.98 59187 0 R1 131567 cellular organisms 99.98 59186 112 D 2 Bacteria 92.89 54990 102 P 1224 Pseudomonadota 55.08 32607 246 C 1236 Gammaproteobacteria 50.52 29909 24 O 135614 Lysobacterales 50.05 29630 620 F 1775411 Rhodanobacteraceae 37.94 22458 1663 G 242605 Luteibacter 34.39 20360 20360 S 2911537 Luteibacter aegosomatis 0.52 305 305 S 2911539 Luteibacter aegosomatissinici 0.13 78 78 S 2911538 Luteibacter aegosomaticola 0.07 42 42 S 2589080 Luteibacter pinisoli 0.02 10 10 S 564369 Luteibacter anthropi 9.98 5906 1743 G 231454 Dyella 6.99 4140 7 G1 2634549 unclassified Dyella 5.74 3396 3396 S 3075430 Dyella sp. BiH032 0.88 521 521 S 3069105 Dyella sp. A6 0.36 215 215 S 2501295 Dyella sp. M7H15-1 0.00 1 1 S 2994496 Dyella sp. GSA-30 0.04 21 21 S 445710 Dyella thiooxydans 0.00 1 1 S 522259 Dyella terrae 0.00 1 1 S 1849581 Dyella caseinilytica 0.54 320 1 G 70411 Frateuria 0.33 197 197 S 1542730 Frateuria soli 0.19 112 112 S 2898793 Frateuria edaphi 0.02 10 0 S 81475 Frateuria aurantia 0.02 10 10 S1 767434 Frateuria aurantia DSM 6220 0.51 302 6 G 75309 Rhodanobacter 0.39 229 229 S 582702 Rhodanobacter glycinis 0.11 63 1 G1 2621553 unclassified Rhodanobacter 0.10 62 62 S 3031330 Rhodanobacter sp. AS-Z3 0.01 4 4 S 416169 Rhodanobacter thiooxydans 0.02 13 0 G 323413 Dokdonella 0.02 13 0 S 323415 Dokdonella koreensis 0.02 13 13 S1 1300342 Dokdonella koreensis DS-123 0.01 4 0 G 2233801 Ahniella 0.01 4 4 S 2021234 Ahniella affigens 0.01 4 0 G 2707020 Aerosticca 0.01 4 4 S 2010829 Aerosticca soli 0.01 3 0 G 1453544 Tahibacter 0.01 3 3 S 2976241 Tahibacter amnicola 0.43 255 40 F 32033 Lysobacteraceae 0.19 111 27 G 40323 Stenotrophomonas 0.14 80 80 S 128780 Stenotrophomonas acidaminiphila 0.01 3 3 S 216778 Stenotrophomonas rhizophila 0.00 1 0 G1 196198 unclassified Stenotrophomonas 0.00 1 1 S 2682487 Stenotrophomonas sp. SXG-1 0.06 36 23 G 68 Lysobacter 0.01 5 5 S 84531 Lysobacter antibioticus 0.00 2 2 S 2822368 Lysobacter luteus 0.00 2 2 S 2763317 Lysobacter solisilvae 0.00 1 1 S 1003114 Lysobacter yananisis 0.00 1 1 S 1324796 Lysobacter lycopersici 0.00 1 1 S 2591633 Lysobacter alkalisoli 0.00 1 1 S 2698682 Lysobacter oculi 0.04 23 8 G 338 Xanthomonas 0.02 14 14 S 29447 Xanthomonas albilineans 0.00 1 0 G1 643453 Xanthomonas citri group 0.00 1 0 S 346 Xanthomonas citri 0.00 1 1 S1 454594 Xanthomonas citri pv. mangiferaeindicae 0.03 17 15 G 83618 Pseudoxanthomonas 0.00 2 2 S 128785 Pseudoxanthomonas mexicana 0.03 15 0 G 490567 Arenimonas 0.03 15 15 S 370777 Arenimonas daejeonensis 0.01 5 5 G 2370 Xylella 0.01 5 0 G 141948 Thermomonas 0.01 3 0 G1 2633315 unclassified Thermomonas 0.00 2 2 S 2771436 Thermomonas sp. XSG 0.00 1 1 S 2714945 Thermomonas sp. HDW16 0.00 1 1 S 215691 Thermomonas brevis 0.00 1 1 S 1463158 Thermomonas carbonis 0.00 2 1 G 83614 Luteimonas 0.00 1 0 G1 2629088 unclassified Luteimonas 0.00 1 1 S 1896164 Luteimonas sp. JM171 0.00 1 0 G 2709666 Pseudolysobacter 0.00 1 1 S 2511995 Pseudolysobacter antarcticus 1.39 823 0 O 72274 Pseudomonadales 1.20 711 0 F 2887365 Marinobacteraceae 1.20 711 685 G 2742 Marinobacter 0.04 21 19 G1 83889 unclassified Marinobacter 0.00 2 2 S 3035454 Marinobacter sp. LA51 0.01 3 3 S 2603215 Marinobacter fonticola 0.00 2 0 S 2743 Marinobacter nauticus 0.00 2 2 S1 351348 Marinobacter nauticus VT8 0.19 111 21 F 135621 Pseudomonadaceae 0.12 70 28 G 286 Pseudomonas 0.02 12 0 G1 136841 Pseudomonas aeruginosa group 0.02 12 12 S 287 Pseudomonas aeruginosa 0.02 11 0 G1 136843 Pseudomonas fluorescens group 0.01 8 0 S 47883 Pseudomonas synxantha 0.01 8 8 S1 96901 Pseudomonas synxantha BG33R 0.00 2 2 S 76761 Pseudomonas veronii 0.00 1 1 S 47878 Pseudomonas azotoformans 0.02 9 1 G1 196821 unclassified Pseudomonas 0.00 2 2 S 2762896 Pseudomonas sp. MPDS 0.00 1 1 S 2954080 Pseudomonas sp. FP1762 0.00 1 1 S 2954088 Pseudomonas sp. FP2262 0.00 1 1 S 2705472 Pseudomonas sp. MTM4 0.00 1 1 S 2662034 Pseudomonas sp. 13159349 0.00 1 1 S 2871095 Pseudomonas sp. DR48 0.00 1 1 S 2954094 Pseudomonas sp. FP453 0.01 7 1 G1 136845 Pseudomonas putida group 0.01 5 5 S 303 Pseudomonas putida 0.00 1 1 S 76759 Pseudomonas monteilii 0.00 2 2 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 1 1 S 65741 Pseudomonas knackmussii 0.01 8 0 G 2901164 Stutzerimonas 0.01 8 0 G1 136846 Stutzerimonas stutzeri group 0.01 4 4 S 74829 Stutzerimonas balearica 0.01 4 0 G2 578833 Stutzerimonas stutzeri subgroup 0.01 4 4 S 316 Stutzerimonas stutzeri 0.01 8 6 G 2901189 Halopseudomonas 0.00 2 2 S 1708783 Halopseudomonas oceani 0.00 2 0 G 1654787 Thiopseudomonas 0.00 2 2 S 1697053 Thiopseudomonas alkaliphila 0.00 2 0 G 2758906 Entomomonas 0.00 2 2 S 2785331 Entomomonas asaccharolytica 0.00 1 0 F 3085095 Pseudohongiellaceae 0.00 1 0 G 1524249 Pseudohongiella 0.00 1 1 S 1249552 Pseudohongiella spirulinae 0.97 575 38 O 91347 Enterobacterales 0.78 463 30 F 543 Enterobacteriaceae 0.23 137 0 G 561 Escherichia 0.23 137 135 S 562 Escherichia coli 0.00 2 2 S1 362663 Escherichia coli 536 0.19 114 0 F1 2890311 Klebsiella/Raoultella group 0.19 114 0 G 570 Klebsiella 0.16 96 95 S 573 Klebsiella pneumoniae 0.00 1 1 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.03 16 16 S 548 Klebsiella aerogenes 0.00 1 0 S 1463165 Klebsiella quasipneumoniae 0.00 1 1 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.00 1 0 G1 2608929 unclassified Klebsiella 0.00 1 1 S 1905288 Klebsiella sp. LTGPAF-6F 0.15 90 2 G 590 Salmonella 0.15 88 22 S 28901 Salmonella enterica 0.11 66 9 S1 59201 Salmonella enterica subsp. enterica 0.03 16 16 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.02 12 12 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.01 7 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.01 7 7 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.01 6 6 S2 29474 Salmonella enterica subsp. enterica serovar California 0.01 5 4 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 1 1 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.01 3 3 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.00 2 2 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.00 2 1 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 1 1 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.00 1 1 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 1 1 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.00 1 1 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 1 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 1 1 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.09 52 0 G 547 Enterobacter 0.09 51 0 G1 354276 Enterobacter cloacae complex 0.06 36 36 S 299767 Enterobacter ludwigii 0.02 11 11 S 158836 Enterobacter hormaechei 0.01 3 0 S 550 Enterobacter cloacae 0.01 3 3 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 1 1 S 61645 Enterobacter asburiae 0.00 1 1 S 881260 Enterobacter bugandensis 0.04 21 0 F1 191675 Enterobacteriaceae incertae sedis 0.04 21 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.03 20 0 G 472825 Candidatus Purcelliella 0.03 20 20 S 472834 Candidatus Purcelliella pentastirinorum 0.00 1 1 G 1302410 Candidatus Annandia 0.02 12 0 F1 36866 unclassified Enterobacteriaceae 0.01 8 8 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.01 4 4 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.01 4 0 G 544 Citrobacter 0.01 4 4 S 2971264 Citrobacter enshiensis 0.00 2 0 G 1177214 Candidatus Profftia 0.00 2 0 G1 2735709 unclassified Candidatus Profftia 0.00 2 2 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.00 1 0 G 409304 Candidatus Ishikawella 0.00 1 0 S 168169 Candidatus Ishikawella capsulata 0.00 1 1 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.03 20 0 F 2812006 Bruguierivoracaceae 0.03 20 0 G 84565 Sodalis 0.03 17 0 S 1486991 Candidatus Sodalis pierantonius 0.03 17 17 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.01 3 3 S 2697027 Sodalis ligni 0.03 19 0 F 1903409 Erwiniaceae 0.02 12 0 G 551 Erwinia 0.02 11 0 G1 2622719 unclassified Erwinia 0.02 11 11 S 215689 Erwinia sp. Ejp617 0.00 1 1 S 1922217 Candidatus Erwinia haradaeae 0.01 5 0 G 32199 Buchnera 0.01 5 0 S 9 Buchnera aphidicola 0.01 3 3 S1 1965431 Buchnera aphidicola (Ceratoglyphina bambusae) 0.00 2 2 S1 1878935 Buchnera aphidicola (Cinara confinis) 0.00 2 0 G 53335 Pantoea 0.00 2 2 S 59814 Pantoea dispersa 0.03 19 0 F 1903411 Yersiniaceae 0.02 13 0 G 613 Serratia 0.02 9 9 S 61652 Serratia rubidaea 0.00 2 0 S 82996 Serratia plymuthica 0.00 2 2 S1 1006598 Serratia plymuthica RVH1 0.00 2 2 S 138074 Serratia symbiotica 0.01 6 0 G 629 Yersinia 0.01 4 0 G1 1649845 Yersinia pseudotuberculosis complex 0.01 3 0 S 632 Yersinia pestis 0.00 2 2 S1 649716 Yersinia pestis Pestoides G 0.00 1 1 S1 1345701 Yersinia pestis 790 0.00 1 1 S 633 Yersinia pseudotuberculosis 0.00 2 2 S 935293 Yersinia entomophaga 0.02 14 0 F 1903414 Morganellaceae 0.01 6 0 G 637 Arsenophonus 0.01 6 6 S 638 Arsenophonus nasoniae 0.01 4 0 G 581 Morganella 0.01 4 4 S 582 Morganella morganii 0.01 4 0 G 626 Xenorhabdus 0.01 4 0 S 40577 Xenorhabdus poinarii 0.01 4 4 S1 1354304 Xenorhabdus poinarii G6 0.00 1 0 F 1903410 Pectobacteriaceae 0.00 1 1 G 122277 Pectobacterium 0.00 1 0 F 1903412 Hafniaceae 0.00 1 0 G 635 Edwardsiella 0.00 1 1 S 636 Edwardsiella tarda 0.94 554 8 O 135619 Oceanospirillales 0.77 458 10 F 224372 Alcanivoracaceae 0.73 431 430 G 3020832 Alloalcanivorax 0.00 1 1 S 1094342 Alloalcanivorax xenomutans 0.03 17 0 G 3020833 Isoalcanivorax 0.03 17 0 S 1306787 Isoalcanivorax pacificus 0.03 17 17 S1 391936 Isoalcanivorax pacificus W11-5 0.14 84 77 F 28256 Halomonadaceae 0.01 6 0 F1 114403 Zymobacter group 0.01 4 0 G 235572 Candidatus Portiera 0.01 4 4 S 91844 Candidatus Portiera aleyrodidarum 0.00 2 0 G 114185 Candidatus Carsonella 0.00 2 2 S 114186 Candidatus Carsonella ruddii 0.00 1 0 G 42054 Chromohalobacter 0.00 1 1 S 141389 Chromohalobacter canadensis 0.01 3 0 F 135620 Oceanospirillaceae 0.00 2 0 G 2893036 Venatoribacter 0.00 2 2 S 2661630 Venatoribacter cucullus 0.00 1 0 G 28253 Marinomonas 0.00 1 1 S 2773454 Marinomonas algicola 0.00 1 0 F 255527 Saccharospirillaceae 0.00 1 0 G 231683 Saccharospirillum 0.00 1 1 S 2161747 Saccharospirillum mangrovi 0.23 135 0 O 135618 Methylococcales 0.23 135 87 F 403 Methylococcaceae 0.02 11 0 G 429 Methylobacter 0.02 11 0 G1 2635283 unclassified Methylobacter 0.02 11 11 S 2911520 Methylobacter sp. YRD-M1 0.02 10 7 G 413 Methylococcus 0.00 2 2 S 414 Methylococcus capsulatus 0.00 1 0 G1 2618889 unclassified Methylococcus 0.00 1 1 S 2812648 Methylococcus sp. EFPC2 0.02 9 0 G 1295378 Methylogaea 0.02 9 9 S 1295382 Methylogaea oryzae 0.01 7 0 G 1760987 Methylomagnum 0.01 7 7 S 1760988 Methylomagnum ishizawai 0.01 3 0 G 1221209 Methylomarinum 0.01 3 0 G1 2617533 unclassified Methylomarinum 0.01 3 3 S 3067653 Methylomarinum sp. Ch1-1 0.01 3 0 G 1808977 Candidatus Methylospira 0.01 3 3 S 1808979 Candidatus Methylospira mobilis 0.00 2 0 G 3135206 Candidatus Methylocalor 0.00 2 2 S 3108543 Candidatus Methylocalor cossyra 0.00 1 1 G 416 Methylomonas 0.00 1 0 G 73778 Methylocaldum 0.00 1 1 S 73780 Methylocaldum szegediense 0.00 1 0 G 2822410 Methylotuvimicrobium 0.00 1 1 S 95641 Methylotuvimicrobium buryatense 0.18 109 1 O 135613 Chromatiales 0.11 64 9 F 1046 Chromatiaceae 0.03 18 13 G 85072 Allochromatium 0.01 4 4 S 553982 Allochromatium tepidum 0.00 1 0 S 1049 Allochromatium vinosum 0.00 1 1 S1 572477 Allochromatium vinosum DSM 180 0.03 17 1 G 67575 Rheinheimera 0.03 16 0 G1 115860 unclassified Rheinheimera 0.02 9 9 S 3072790 Rheinheimera sp. MMS21-TC3 0.01 7 7 S 1763998 Rheinheimera sp. F8 0.02 10 5 G 1056 Thiocapsa 0.01 5 5 S 521689 Thiocapsa bogorovii 0.01 5 5 G 2796146 Candidatus Nitrosacidococcus 0.00 2 0 G 1980513 Candidatus Nitrosoglobus 0.00 2 2 S 1630141 Candidatus Nitrosoglobus terrae 0.00 1 1 G 1227 Nitrosococcus 0.00 1 0 G 85076 Marichromatium 0.00 1 0 S 37487 Marichromatium purpuratum 0.00 1 1 S1 765910 Marichromatium purpuratum 984 0.00 1 0 G 2828366 Caldichromatium 0.00 1 1 S 2699430 Caldichromatium japonicum 0.07 41 0 F 72276 Ectothiorhodospiraceae 0.03 20 0 G 1335745 Spiribacter 0.03 20 0 G1 2629425 unclassified Spiribacter 0.03 20 20 S 2666185 Spiribacter sp. 2438 0.03 16 1 G 1765964 Acidihalobacter 0.02 14 14 S 1765967 Acidihalobacter ferrooxydans 0.00 1 1 S 2792603 Acidihalobacter aeolianus 0.01 4 1 G 85108 Halorhodospira 0.01 3 3 S 1052 Halorhodospira halochloris 0.00 1 0 G 106633 Thioalkalivibrio 0.00 1 0 S 108010 Thioalkalivibrio paradoxus 0.00 1 1 S1 713585 Thioalkalivibrio paradoxus ARh 1 0.00 1 0 F 255526 Halothiobacillaceae 0.00 1 1 G 109262 Halothiobacillus 0.00 1 0 F 449719 Granulosicoccaceae 0.00 1 0 G 1860077 Sulfuriflexus 0.00 1 1 S 1811807 Sulfuriflexus mobilis 0.00 1 0 F 2035710 Thioalkalibacteraceae 0.00 1 0 G 2035712 Guyparkeria 0.00 1 1 S 47960 Guyparkeria halophila 0.10 57 0 O 2887326 Moraxellales 0.10 57 1 F 468 Moraxellaceae 0.07 44 26 G 469 Acinetobacter 0.02 10 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.01 8 7 S 470 Acinetobacter baumannii 0.00 1 1 S1 1279013 Acinetobacter baumannii PR07 0.00 1 1 S 471 Acinetobacter calcoaceticus 0.00 1 0 S 48296 Acinetobacter pittii 0.00 1 1 S1 871585 Acinetobacter pittii PHEA-2 0.01 3 0 G1 196816 unclassified Acinetobacter 0.00 1 1 S 2563897 Acinetobacter sp. 10FS3-1 0.00 1 1 S 2919376 Acinetobacter sp. AOR07_HL 0.00 1 1 S 1879049 Acinetobacter sp. WCHAc010034 0.00 2 2 S 202956 Acinetobacter towneri 0.00 1 1 S 108981 Acinetobacter schindleri 0.00 1 0 S 1148157 Acinetobacter oleivorans 0.00 1 1 S1 436717 Acinetobacter oleivorans DR1 0.00 1 1 S 40214 Acinetobacter johnsonii 0.02 12 1 G 497 Psychrobacter 0.02 11 0 G1 196806 unclassified Psychrobacter 0.02 11 11 S 1415574 Psychrobacter sp. LV10R520-6 0.08 49 0 O 135622 Alteromonadales 0.05 27 0 F 267890 Shewanellaceae 0.05 27 7 G 22 Shewanella 0.01 8 8 S 62322 Shewanella baltica 0.01 7 7 S 1028752 Shewanella aestuarii 0.01 3 3 G1 196818 unclassified Shewanella 0.00 1 1 S 24 Shewanella putrefaciens 0.00 1 1 S 2726434 Shewanella oncorhynchi 0.01 7 0 F 72275 Alteromonadaceae 0.01 3 0 F1 2903219 Alteromonas/Salinimonas group 0.01 3 2 G 226 Alteromonas 0.00 1 0 G1 2614992 unclassified Alteromonas 0.00 1 1 S 2267264 Alteromonas sp. RKMC-009 0.00 1 0 G 261825 Agarivorans 0.00 1 0 G1 2636026 unclassified Agarivorans 0.00 1 1 S 2937286 Agarivorans sp. TSD2052 0.00 1 0 G 1621534 Paraglaciecola 0.00 1 0 S 326544 Paraglaciecola psychrophila 0.00 1 1 S1 1129794 Paraglaciecola psychrophila 170 0.00 1 0 G 1858563 Alkalimarinus 0.00 1 1 S 1632866 Alkalimarinus sediminis 0.00 1 0 G 2894574 Saccharobesus 0.00 1 1 S 2172099 Saccharobesus litoralis 0.01 7 0 F 267888 Pseudoalteromonadaceae 0.01 7 3 G 53246 Pseudoalteromonas 0.01 4 0 G1 194690 unclassified Pseudoalteromonas 0.01 4 4 S 2785910 Pseudoalteromonas sp. A41-2 0.01 6 1 F 267889 Colwelliaceae 0.01 3 0 G 1518149 Thalassotalea 0.01 3 0 G1 2614972 unclassified Thalassotalea 0.01 3 3 S 2594005 Thalassotalea sp. PS06 0.00 2 2 G 28228 Colwellia 0.00 2 0 F 267893 Idiomarinaceae 0.00 2 0 G 2800384 Pseudidiomarina 0.00 2 2 S 1940690 Pseudidiomarina andamanensis 0.07 41 0 O 135623 Vibrionales 0.07 41 2 F 641 Vibrionaceae 0.06 37 5 G 662 Vibrio 0.03 17 17 S 666 Vibrio cholerae 0.01 7 0 G1 2614977 unclassified Vibrio 0.01 4 4 S 2661921 Vibrio sp. THAF191c 0.01 3 3 S 2822843 Vibrio sp. SCSIO 43186 0.01 6 0 G1 717610 Vibrio harveyi group 0.01 4 4 S 669 Vibrio harveyi 0.00 1 1 S 663 Vibrio alginolyticus 0.00 1 1 S 670 Vibrio parahaemolyticus 0.00 1 0 S 672 Vibrio vulnificus 0.00 1 1 S1 914127 Vibrio vulnificus MO6-24/O 0.00 1 0 S 52443 Vibrio tapetis 0.00 1 1 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 1 0 G 657 Photobacterium 0.00 1 1 S 553611 Photobacterium leiognathi 0.00 1 0 G 188143 Enterovibrio 0.00 1 1 S 1927128 Candidatus Enterovibrio luxaltus 0.07 40 1 O 118969 Legionellales 0.05 27 2 F 444 Legionellaceae 0.04 25 2 G 445 Legionella 0.03 15 0 S 446 Legionella pneumophila 0.03 15 2 S1 91891 Legionella pneumophila subsp. pneumophila 0.02 13 13 S2 272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 0.01 3 3 S 1867846 Legionella clemsonensis 0.00 2 2 S 96232 Legionella lytica 0.00 1 0 S 96230 Legionella fallonii 0.00 1 1 S1 1212491 Legionella fallonii LLAP-10 0.00 1 0 S 29423 Legionella oakridgensis 0.00 1 1 S1 1268635 Legionella oakridgensis ATCC 33761 = DSM 21215 0.00 1 1 S 45065 Legionella geestiana 0.02 12 1 F 118968 Coxiellaceae 0.02 9 0 G 254245 Aquicella 0.02 9 9 S 254247 Aquicella siphonis 0.00 1 0 G 776 Coxiella 0.00 1 1 S 777 Coxiella burnetii 0.00 1 0 F1 134284 unclassified Coxiellaceae 0.00 1 1 S 1592897 Coxiella-like endosymbiont 0.03 19 0 O 135625 Pasteurellales 0.03 19 2 F 712 Pasteurellaceae 0.02 13 0 G 713 Actinobacillus 0.02 13 0 S 718 Actinobacillus equuli 0.02 13 13 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.01 3 0 G 724 Haemophilus 0.00 2 2 S 729 Haemophilus parainfluenzae 0.00 1 1 S 727 Haemophilus influenzae 0.00 1 0 G 745 Pasteurella 0.00 1 1 S 747 Pasteurella multocida 0.03 15 0 O 72273 Thiotrichales 0.02 11 2 F 135616 Piscirickettsiaceae 0.01 4 1 G 40222 Methylophaga 0.01 3 3 S 2881052 Methylophaga pinxianii 0.01 3 0 G 2039723 Thiomicrorhabdus 0.01 3 0 G1 2636650 unclassified Thiomicrorhabdus 0.01 3 3 S 2039724 Thiomicrorhabdus sp. 0.00 1 0 G 1237 Piscirickettsia 0.00 1 1 S 1238 Piscirickettsia salmonis 0.00 1 1 G 34067 Cycloclasticus 0.00 2 0 F 135617 Thiotrichaceae 0.00 2 0 G 1030 Thiothrix 0.00 1 1 S 96472 Thiothrix winogradskyi 0.00 1 1 S 2735563 Thiothrix subterranea 0.00 2 0 F 2056687 Fastidiosibacteraceae 0.00 2 0 G 2056696 Cysteiniphilum 0.00 2 0 G1 2610889 unclassified Cysteiniphilum 0.00 2 2 S 2975055 Cysteiniphilum sp. QT6929 0.02 12 0 O 135624 Aeromonadales 0.02 12 0 F 84642 Aeromonadaceae 0.02 10 0 G 642 Aeromonas 0.02 9 9 S 654 Aeromonas veronii 0.00 1 0 G1 257493 unclassified Aeromonas 0.00 1 1 S 2033033 Aeromonas sp. CU5 0.00 2 0 G 43947 Tolumonas 0.00 1 1 S 43948 Tolumonas auensis 0.00 1 0 G1 263764 environmental samples 0.00 1 1 S 263765 uncultured Tolumonas sp. 0.02 11 0 O 1706369 Cellvibrionales 0.01 4 0 F 1706373 Microbulbiferaceae 0.01 4 1 G 48073 Microbulbifer 0.00 2 2 S 86173 Microbulbifer elongatus 0.00 1 1 G1 2619833 unclassified Microbulbifer 0.01 3 1 F 1706371 Cellvibrionaceae 0.00 2 0 G 10 Cellvibrio 0.00 2 2 S 155077 Cellvibrio japonicus 0.00 2 1 F 1706372 Halieaceae 0.00 1 0 G 1217416 Halioglobus 0.00 1 1 S 930805 Halioglobus japonicus 0.00 2 0 F 1706375 Spongiibacteraceae 0.00 2 0 G 1084558 Oceanicoccus 0.00 2 2 S 716816 Oceanicoccus sagamiensis 0.01 3 0 O 135615 Cardiobacteriales 0.01 3 1 F 868 Cardiobacteriaceae 0.00 2 0 G 869 Dichelobacter 0.00 2 2 S 870 Dichelobacter nodosus 0.01 3 0 C1 118884 Gammaproteobacteria incertae sedis 0.00 2 0 G 204619 Candidatus Nardonella 0.00 2 2 S 1972134 endosymbiont of Sipalinus gigas 0.00 1 0 C2 32036 sulfur-oxidizing symbionts 0.00 1 0 G 2686004 Candidatus Vondammii 0.00 1 0 G1 2687300 unclassified Candidatus Vondammii 0.00 1 1 S 2687299 Candidatus Vondammii sp. HM_W22 0.00 2 0 O 1934945 Immundisolibacterales 0.00 2 0 F 1934946 Immundisolibacteraceae 0.00 2 0 G 1934947 Immundisolibacter 0.00 2 2 S 1810504 Immundisolibacter cernigliae 0.00 2 0 O 3084968 Thiohalomonadales 0.00 2 0 F 3084969 Thiohalomonadaceae 0.00 2 0 G 2034504 Sulfurivermis 0.00 2 2 S 1972068 Sulfurivermis fontis 0.00 1 0 O 1692040 Acidiferrobacterales 0.00 1 0 F 1692041 Acidiferrobacteraceae 0.00 1 0 G 1692042 Sulfurifustis 0.00 1 1 S 1675686 Sulfurifustis variabilis 0.00 1 0 C1 33811 unclassified Gammaproteobacteria 0.00 1 1 S 1248727 endosymbiont of unidentified scaly snail isolate Monju 32.87 19460 106 C 28211 Alphaproteobacteria 18.54 10975 4 O 204441 Rhodospirillales 18.47 10936 286 F 433 Acetobacteraceae 16.15 9561 9561 G 522 Acidiphilium 1.68 994 0 G 50709 Acidocella 1.68 994 0 G1 2648610 unclassified Acidocella 1.68 994 994 S 2697363 Acidocella sp. MX-AZ03 0.06 33 0 G 512381 Acidisoma 0.06 33 0 G1 2634065 unclassified Acidisoma 0.06 33 33 S 3040935 Acidisoma sp. PAMC 29798 0.04 23 2 G 125216 Roseomonas 0.03 16 16 S 1750527 Roseomonas fluvialis 0.01 4 4 S 2768162 Roseomonas haemaphysalidis 0.00 1 1 S 207340 Roseomonas mucosa 0.02 9 0 G 1079922 Commensalibacter 0.02 9 9 S 2070537 Commensalibacter melissae 0.01 7 0 G 504465 Rhodovastum 0.01 7 7 S 504468 Rhodovastum atsumiense 0.01 5 0 G 153497 Kozakia 0.01 5 5 S 153496 Kozakia baliensis 0.01 3 0 G 1434011 Komagataeibacter 0.01 3 3 S 65958 Komagataeibacter oboediens 0.01 3 0 G 2870712 Pararoseomonas 0.01 3 0 G1 2870718 unclassified Pararoseomonas 0.01 3 3 S 3114537 Pararoseomonas sp. SCSIO 73927 0.01 3 0 G 2870717 Pseudoroseomonas 0.01 3 3 S 204525 Pseudoroseomonas cervicalis 0.00 2 0 G 2791118 Oecophyllibacter 0.00 2 2 S 2558360 Oecophyllibacter saccharovorans 0.00 2 2 G 1706033 Sediminicoccus 0.00 2 0 G 35812 Roseococcus 0.00 2 2 S 2771361 Roseococcus microcysteis 0.00 1 0 G 2811380 Entomobacter 0.00 1 1 S 2762277 Entomobacter blattae 0.00 1 1 G 1602345 Parasaccharibacter 0.00 1 0 G 434 Acetobacter 0.00 1 1 S 65959 Acetobacter pomorum 0.02 14 0 F 2844866 Thalassospiraceae 0.02 13 2 G 168934 Thalassospira 0.01 6 6 S 2048283 Thalassospira marina 0.01 5 0 G1 2648997 unclassified Thalassospira 0.01 4 4 S 2946605 Thalassospira sp. GO-4 0.00 1 1 S 3035476 Thalassospira sp. SN3W 0.00 1 0 G 1182780 Magnetospira 0.00 1 0 G1 2685734 unclassified Magnetospira 0.00 1 1 S 1288970 Magnetospira sp. QH-2 0.01 7 0 F 3031143 Magnetovibrionaceae 0.01 7 0 G 1866954 Varunaivibrio 0.01 7 7 S 1773489 Varunaivibrio sulfuroxidans 0.01 6 0 F 2829815 Azospirillaceae 0.01 4 4 G 191 Azospirillum 0.00 1 1 G 204447 Skermanella 0.00 1 0 G 1543705 Nitrospirillum 0.00 1 0 S 3144925 Nitrospirillum viridazoti 0.00 1 1 S1 1441467 Nitrospirillum viridazoti CBAmc 0.01 3 0 F 2844601 Stellaceae 0.01 3 0 G 93 Stella 0.01 3 3 S 94 Stella humosa 0.00 2 0 F 2690195 Elioraeaceae 0.00 2 0 G 457933 Elioraea 0.00 2 2 S 2843330 Elioraea tepida 0.00 1 0 F 41295 Rhodospirillaceae 0.00 1 0 G 1081 Rhodospirillum 0.00 1 1 S 1085 Rhodospirillum rubrum 0.00 1 0 F 2813951 Terasakiellaceae 0.00 1 0 G 196080 Terasakiella 0.00 1 0 G1 2614952 unclassified Terasakiella 0.00 1 1 S 2560057 Terasakiella sp. SH-1 0.00 1 0 F 3031144 Dongiaceae 0.00 1 1 G 2705399 Hypericibacter 7.70 4560 412 O 204455 Rhodobacterales 6.57 3892 3382 F 31989 Paracoccaceae 0.22 130 0 G 2937410 Gymnodinialimonas 0.22 128 128 S 2856823 Gymnodinialimonas ceratoperidinii 0.00 2 0 G1 2937411 unclassified Gymnodinialimonas 0.00 2 2 S 3138498 Gymnodinialimonas sp. 57CJ19 0.16 95 23 G 265 Paracoccus 0.03 19 19 S 2259340 Paracoccus suum 0.03 17 17 S 659350 Paracoccus stylophorae 0.03 15 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.01 8 8 S 3030011 Paracoccus sp. S3-43 0.01 6 6 S 2760307 Paracoccus sp. MC1862 0.00 1 1 S 2589076 Paracoccus sp. AK26 0.02 9 9 S 266 Paracoccus denitrificans 0.01 5 5 S 1529068 Paracoccus tegillarcae 0.01 3 3 S 3017784 Paracoccus albus 0.01 3 0 S 34003 Paracoccus aminophilus 0.01 3 3 S1 1367847 Paracoccus aminophilus JCM 7686 0.00 1 1 S 147645 Paracoccus yeei 0.07 41 2 G 285107 Thioclava 0.07 39 39 S 1549850 Thioclava electrotropha 0.06 35 1 G 204456 Gemmobacter 0.03 20 20 S 2169400 Gemmobacter aquarius 0.02 14 14 S 2840474 Gemmobacter fulvus 0.05 28 0 G 2831955 Pikeienuella 0.05 28 28 S 2748098 Pikeienuella piscinae 0.04 21 0 G 3050722 Algicella 0.04 21 21 S 2683284 Algicella marina 0.03 18 11 G 2211641 Yoonia 0.01 7 0 G1 2629118 unclassified Yoonia 0.01 6 6 S 3137369 Yoonia sp. BS5-3 0.00 1 1 S 3137368 Yoonia sp. G8-12 0.03 15 0 G 2944826 Pontibrevibacter 0.03 15 15 S 2758038 Pontibrevibacter nitratireducens 0.02 14 0 G 1209946 Roseicitreum 0.02 14 14 S 564137 Roseicitreum antarcticum 0.02 13 0 G 121820 Roseinatronobacter 0.02 13 0 G1 2641430 unclassified Roseinatronobacter 0.02 13 13 S 3035471 Roseinatronobacter sp. S2 0.02 13 0 G 1955420 Silicimonas 0.02 13 13 S 1826607 Silicimonas algicola 0.02 12 0 G 34008 Rhodovulum 0.02 12 0 G1 2631432 unclassified Rhodovulum 0.02 12 12 S 1564506 Rhodovulum sp. P5 0.02 11 0 G 1060 Rhodobacter 0.01 8 8 S 1061 Rhodobacter capsulatus 0.00 2 2 S 1850250 Rhodobacter xanthinilyticus 0.00 1 0 G1 196779 unclassified Rhodobacter 0.00 1 1 S 2033869 Rhodobacter sp. CZR27 0.01 7 0 G 2818469 Fuscovulum 0.01 7 7 S 1075 Fuscovulum blasticum 0.01 7 0 G 2946607 Neotabrizicola 0.01 7 7 S 2807096 Neotabrizicola shimadae 0.01 6 0 G 238783 Pseudorhodobacter 0.01 6 6 S 2500533 Pseudorhodobacter turbinis 0.01 6 0 G 366614 Haematobacter 0.01 6 6 S 195105 Haematobacter massiliensis 0.01 5 0 G 2211638 Limimaricola 0.01 5 5 S 1492771 Limimaricola variabilis 0.01 5 0 G 1679449 Pseudooceanicola 0.01 5 5 S 1537215 Pseudooceanicola algae 0.01 5 0 F1 3020825 Marivivens group 0.01 5 0 G 1759396 Marivivens 0.01 5 0 G1 2622455 unclassified Marivivens 0.01 5 5 S 3051171 Marivivens sp. LCG002 0.01 4 0 G 2211635 Cognatishimia 0.01 4 4 S 1715691 Cognatishimia activa 0.01 4 0 G 1775705 Frigidibacter 0.01 4 4 S 1335048 Frigidibacter mobilis 0.01 3 0 G 1434002 Falsirhodobacter 0.01 3 3 S 2692330 Falsirhodobacter algicola 0.01 3 0 G 1097466 Defluviimonas 0.01 3 0 G1 2632198 unclassified Defluviimonas 0.01 3 3 S 3121287 Defluviimonas sp. SAOS-178_SWC 0.01 3 0 G 3118803 Fontisubflavum 0.01 3 3 S 2978973 Fontisubflavum oceani 0.00 2 0 G 1284657 Planktomarina 0.00 2 0 S 1284658 Planktomarina temperata 0.00 2 2 S1 666509 Planktomarina temperata RCA23 0.00 2 0 G 2683599 Paroceanicella 0.00 2 2 S 2579971 Paroceanicella profunda 0.00 1 0 G 3029205 Abyssibius 0.00 1 1 S 2881234 Abyssibius alkaniclasticus 0.00 1 0 G 2680018 Rhodophyticola 0.00 1 0 G1 2680031 unclassified Rhodophyticola 0.00 1 1 S 2916397 Rhodophyticola sp. CCM32 0.43 256 17 F 2854170 Roseobacteraceae 0.18 105 0 G 2919626 Alloyangia 0.18 105 105 S 311180 Alloyangia pacifica 0.15 88 0 G 266808 Thalassobacter 0.15 88 88 S 266809 Thalassobacter stenotrophicus 0.03 19 0 G 74030 Roseovarius 0.03 16 0 G1 2614913 unclassified Roseovarius 0.03 16 16 S 2823043 Roseovarius sp. SCSIO 43702 0.01 3 3 S 74031 Roseovarius tolerans 0.01 8 0 G 97050 Ruegeria 0.01 8 8 S 89184 Ruegeria pomeroyi 0.01 5 1 G 60136 Sulfitobacter 0.01 3 0 G1 196795 unclassified Sulfitobacter 0.01 3 3 S 2070369 Sulfitobacter sp. JL08 0.00 1 1 S 1917485 Sulfitobacter alexandrii 0.01 4 1 G 875170 Celeribacter 0.01 3 0 G1 1188777 environmental samples 0.01 3 3 S 1303376 uncultured Celeribacter sp. 0.01 4 2 G 263377 Salipiger 0.00 2 0 G1 2640570 unclassified Salipiger 0.00 2 2 S 3029062 Salipiger sp. H15 0.00 2 1 G 191028 Leisingera 0.00 1 0 G1 2614906 unclassified Leisingera 0.00 1 1 S 2867013 Leisingera sp. M523 0.00 1 0 G 53945 Octadecabacter 0.00 1 1 S 1458307 Octadecabacter temperatus 0.00 1 0 G 1433986 Actibacterium 0.00 1 0 G1 2649852 unclassified Actibacterium 0.00 1 1 S 1609966 Actibacterium sp. EMB200-NS6 0.00 1 0 G 336277 Roseicyclus 0.00 1 1 S 2161673 Roseicyclus marinus 0.00 1 1 G 92944 Ketogulonicigenium 4.08 2416 209 O 356 Hyphomicrobiales 1.04 618 1 F 255475 Aurantimonadaceae 0.91 540 539 G 414371 Aureimonas 0.00 1 1 S 370622 Aureimonas altamirensis 0.13 77 75 G 293088 Martelella 0.00 2 2 S 2583532 Martelella lutilitoris 0.84 496 54 F 335928 Xanthobacteraceae 0.65 386 369 G 279 Xanthobacter 0.03 17 17 S 2528964 Xanthobacter dioxanivorans 0.04 25 20 G 556257 Pseudolabrys 0.01 3 3 S 331696 Pseudolabrys taiwanensis 0.00 2 0 G1 2638514 unclassified Pseudolabrys 0.00 2 2 S 2562284 Pseudolabrys sp. FHR47 0.03 16 0 G 99 Ancylobacter 0.03 16 16 S 223390 Ancylobacter polymorphus 0.02 9 0 G 6 Azorhizobium 0.02 9 0 S 7 Azorhizobium caulinodans 0.02 9 9 S1 438753 Azorhizobium caulinodans ORS 571 0.01 4 0 G 45402 Aquabacter 0.01 4 0 G1 2663263 unclassified Aquabacter 0.01 4 4 S 2820278 Aquabacter sp. L1I39 0.00 2 0 G 204476 Labrys 0.00 2 0 G1 2688601 unclassified Labrys (in: a-proteobacteria) 0.00 2 2 S 2789216 Labrys sp. KNU-23 0.39 228 0 F 118882 Brucellaceae 0.38 227 201 F1 2826938 Brucella/Ochrobactrum group 0.04 26 5 G 234 Brucella 0.02 9 0 S 29459 Brucella melitensis 0.02 9 0 S1 645169 Brucella melitensis bv. 2 0.02 9 9 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.01 8 8 S 94625 Brucella intermedia 0.01 4 0 G1 2632610 unclassified Brucella 0.00 2 2 S 2986424 Brucella sp. MAB-22 0.00 2 2 S 2886044 Brucella sp. JSBI001 0.00 1 0 G 354349 Pseudochrobactrum 0.00 1 1 S 2834768 Pseudochrobactrum algeriensis 0.26 155 8 F 69277 Phyllobacteriaceae 0.19 112 111 G 31988 Aminobacter 0.00 1 0 G1 2644704 unclassified Aminobacter 0.00 1 1 S 2774562 Aminobacter sp. SR38 0.05 32 2 G 68287 Mesorhizobium 0.05 28 1 G1 325217 unclassified Mesorhizobium 0.04 25 25 S 2082387 Mesorhizobium sp. Pch-S 0.00 2 2 S 2493671 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 0.00 2 2 S 2725666 Mesorhizobium terrae 0.00 2 0 G 2911176 Aquibium 0.00 2 2 S 675281 Aquibium microcysteis 0.00 1 1 G 245876 Nitratireductor 0.26 154 43 F 41294 Nitrobacteraceae 0.16 95 95 G 1033 Afipia 0.02 11 2 G 1073 Rhodopseudomonas 0.02 9 9 S 1076 Rhodopseudomonas palustris 0.01 4 3 G 374 Bradyrhizobium 0.00 1 0 G1 2631580 unclassified Bradyrhizobium 0.00 1 1 S 1325120 Bradyrhizobium sp. CCBAU 53421 0.00 1 0 G 1395974 Tardiphaga 0.00 1 1 S 340268 Tardiphaga alba 0.25 148 0 F 45401 Hyphomicrobiaceae 0.23 134 16 G 81 Hyphomicrobium 0.20 118 24 G1 2619925 unclassified Hyphomicrobium 0.09 55 55 S 2682968 Hyphomicrobium sp. ghe19 0.07 39 39 S 717785 Hyphomicrobium sp. MC1 0.02 10 0 G 29407 Rhodoplanes 0.02 10 0 G1 2619116 unclassified Rhodoplanes 0.02 10 10 S 674703 Rhodoplanes sp. Z2-YC6860 0.01 3 0 G 119044 Filomicrobium 0.01 3 3 S 1608628 Candidatus Filomicrobium marinum 0.00 1 1 G 1484898 Methyloceanibacter 0.17 101 9 F 82115 Rhizobiaceae 0.09 56 13 F1 227290 Rhizobium/Agrobacterium group 0.06 34 23 G 379 Rhizobium 0.01 5 0 S 56730 Rhizobium gallicum 0.01 5 0 S1 142627 Rhizobium gallicum bv. gallicum 0.01 5 5 S2 1041138 Rhizobium gallicum bv. gallicum R602sp 0.01 3 0 S 384 Rhizobium leguminosarum 0.01 3 3 S1 386 Rhizobium leguminosarum bv. trifolii 0.01 3 0 G1 2613769 unclassified Rhizobium 0.00 2 2 S 2775403 Rhizobium sp. TH2 0.00 1 1 S 1703969 Rhizobium sp. N324 0.01 6 0 G 1612611 Pararhizobium 0.01 6 6 G1 2643050 unclassified Pararhizobium 0.01 3 1 G 357 Agrobacterium 0.00 1 0 G1 1183400 Agrobacterium tumefaciens complex 0.00 1 1 S 358 Agrobacterium tumefaciens 0.00 1 1 S 1183413 Agrobacterium salinitolerans 0.02 12 2 G 34019 Liberibacter 0.01 5 0 S 309868 Candidatus Liberibacter americanus 0.01 5 5 S1 1261131 Candidatus Liberibacter americanus str. Sao Paulo 0.01 4 0 S 556287 Candidatus Liberibacter solanacearum 0.01 4 4 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.00 1 1 S 34021 Candidatus Liberibacter asiaticus 0.02 12 6 G 323620 Shinella 0.01 6 6 G1 2643062 unclassified Shinella 0.02 9 3 F1 227292 Sinorhizobium/Ensifer group 0.01 6 0 G 28105 Sinorhizobium 0.01 5 5 S 110322 Sinorhizobium terangae 0.00 1 1 S 382 Sinorhizobium meliloti 0.01 3 3 G 274591 Hoeflea 0.11 64 1 F 2813035 Parvibaculaceae 0.09 53 0 G 256616 Parvibaculum 0.09 53 0 S 256618 Parvibaculum lavamentivorans 0.09 53 53 S1 402881 Parvibaculum lavamentivorans DS-1 0.01 8 0 G 444432 Anderseniella 0.01 8 0 G1 2614933 unclassified Anderseniella 0.01 8 8 S 1922226 Anderseniella sp. Alg231-50 0.00 2 0 G 2838250 Kaustia 0.00 2 2 S 2593653 Kaustia mangrovi 0.10 62 3 F 2831106 Devosiaceae 0.09 52 5 G 46913 Devosia 0.07 43 3 G1 196773 unclassified Devosia 0.03 20 20 S 1736675 Devosia sp. A16 0.03 18 18 S 3049774 Devosia sp. RR2S18 0.00 2 2 S 2499144 Devosia sp. 1566 0.01 3 3 S 2774137 Devosia rhizoryzae 0.00 1 1 S 400770 Devosia ginsengisoli 0.01 7 0 G 3064792 Mariluticola 0.01 7 7 S 2909283 Mariluticola halotolerans 0.09 54 0 F 2831100 Boseaceae 0.09 54 51 G 85413 Bosea 0.00 2 2 G1 2653178 unclassified Bosea (in: a-proteobacteria) 0.00 1 1 S 3068632 Bosea beijingensis 0.06 34 0 O1 119042 Hyphomicrobiales incertae sedis 0.04 22 0 G 169055 Nordella 0.04 22 0 G1 2623691 unclassified Nordella 0.04 22 22 S 2712222 Nordella sp. HKS 07 0.02 9 0 G 212791 Enhydrobacter 0.02 9 0 G1 2632691 unclassified Enhydrobacter 0.02 9 9 S 1894999 Enhydrobacter sp. 0.00 1 0 G 376743 Candidatus Endowatersipora 0.00 1 0 G1 3077945 unclassified Candidatus Endowatersipora 0.00 1 1 S 3077946 Candidatus Endowatersipora endosymbiont of Watersipora subatra 0.00 1 0 G 1734920 Pseudorhodoplanes 0.00 1 1 S 1235591 Pseudorhodoplanes sinuspersici 0.00 1 0 G 2874214 Terrihabitans 0.00 1 1 S 708113 Terrihabitans soli 0.03 15 2 F 119045 Methylobacteriaceae 0.02 9 8 G 407 Methylobacterium 0.00 1 1 S 270351 Methylobacterium aquaticum 0.01 4 4 G 186650 Microvirga 0.03 15 3 F 45404 Beijerinckiaceae 0.01 5 0 G 184923 Methylocapsa 0.01 5 0 G1 2639413 unclassified Methylocapsa 0.01 5 5 S 3041435 Methylocapsa sp. D3K7 0.01 3 0 G 532 Beijerinckia 0.01 3 0 S 533 Beijerinckia indica 0.01 3 0 S1 31994 Beijerinckia indica subsp. indica 0.01 3 3 S2 395963 Beijerinckia indica subsp. indica ATCC 9039 0.00 2 2 G 120652 Methylocella 0.00 2 0 G 1156568 Methylovirgula 0.00 2 0 G1 2640612 unclassified Methylovirgula 0.00 2 2 S 2293567 Methylovirgula sp. 4M-Z18 0.02 13 0 F 2821832 Stappiaceae 0.02 10 0 G 150830 Roseibium 0.02 10 0 G1 1936170 environmental samples 0.02 10 10 S 1936171 uncultured Roseibium sp. 0.01 3 0 G 1406135 Breoghania 0.01 3 0 G1 2624130 unclassified Breoghania 0.01 3 3 S 2065378 Breoghania sp. 0.02 9 0 F 772 Bartonellaceae 0.02 9 5 G 773 Bartonella 0.01 3 1 G1 2645622 unclassified Bartonella 0.00 1 1 S 2759660 Bartonella sp. HY038 0.00 1 1 S 3057550 Bartonella sp. TP 0.00 1 1 S 803 Bartonella quintana 0.01 7 0 F 2843308 Pleomorphomonadaceae 0.01 6 0 G 1572860 Hartmannibacter 0.01 6 6 S 1482074 Hartmannibacter diazotrophicus 0.00 1 0 G 261933 Pleomorphomonas 0.00 1 0 G1 442120 environmental samples 0.00 1 1 S 442121 uncultured Pleomorphomonas sp. 0.01 6 0 F 3149308 Rhodoligotrophaceae 0.01 6 0 G 987053 Rhodoligotrophos 0.01 6 0 G1 2635862 unclassified Rhodoligotrophos 0.01 6 6 S 3069264 Rhodoligotrophos sp. CJ14 0.01 6 0 F 2829814 Ahrensiaceae 0.01 6 0 G 1594166 Oricola 0.01 6 6 S 2742145 Oricola thermophila 0.01 4 0 F 3149309 Methylopilaceae 0.01 4 0 G 2041902 Chenggangzhangella 0.01 4 4 S 1437009 Chenggangzhangella methanolivorans 0.01 4 0 F 2685818 Amorphaceae 0.01 4 0 G 1904377 Acuticoccus 0.01 4 2 G1 2631034 unclassified Acuticoccus 0.00 2 2 S 3072793 Acuticoccus sp. MNP-M23 0.01 3 0 F 2843305 Phreatobacteraceae 0.01 3 0 G 1632780 Phreatobacter 0.00 2 2 S 1868589 Phreatobacter cathodiphilus 0.00 1 1 S 1940610 Phreatobacter stygius 0.01 3 0 F 2831111 Kaistiaceae 0.01 3 0 G 166953 Kaistia 0.01 3 0 G1 2649303 unclassified Kaistia 0.01 3 3 S 2795690 Kaistia sp. 32K 0.01 3 3 F 31993 Methylocystaceae 0.00 2 0 F 2831090 Blastochloridaceae 0.00 2 2 G 59282 Blastochloris 0.00 2 0 F 2723775 Lichenihabitantaceae 0.00 2 2 G 2723776 Lichenihabitans 0.00 1 0 F 655351 Cohaesibacteraceae 0.00 1 1 G 655352 Cohaesibacter 2.16 1281 18 O 204457 Sphingomonadales 1.27 750 111 F 335929 Erythrobacteraceae 0.99 589 2 G 2676755 Croceibacterium 0.99 586 586 S 1267766 Croceibacterium atlanticum 0.00 1 1 S 3064139 Croceibacterium aestuarii 0.03 20 6 F1 2800788 Erythrobacter/Porphyrobacter group 0.02 12 0 G 1111 Porphyrobacter 0.02 12 0 G1 2683265 unclassified Porphyrobacter 0.02 12 12 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.00 2 0 G 1041 Erythrobacter 0.00 1 0 G1 126079 environmental samples 0.00 1 1 S 263913 uncultured Erythrobacter sp. 0.00 1 1 G1 2633097 unclassified Erythrobacter 0.02 10 0 G 1295327 Croceicoccus 0.01 8 8 S 450378 Croceicoccus marinus 0.00 1 1 S 1348774 Croceicoccus naphthovorans 0.00 1 1 G1 2629967 unclassified Croceicoccus 0.01 6 0 G 2800686 Tsuneonella 0.01 4 4 S 2338327 Tsuneonella amylolytica 0.00 2 0 G1 2800703 unclassified Tsuneonella 0.00 2 2 S 3042152 Tsuneonella sp. CC-YZS046 0.01 4 0 G 361177 Altererythrobacter 0.01 3 0 G1 2614945 unclassified Altererythrobacter 0.00 2 2 S 3108391 Altererythrobacter sp. H2 0.00 1 1 S 2060312 Altererythrobacter sp. B11 0.00 1 1 S 361183 Altererythrobacter epoxidivorans 0.01 4 0 G 2800681 Aurantiacibacter 0.01 4 0 G1 2800693 unclassified Aurantiacibacter 0.01 4 4 S 3009083 Aurantiacibacter sp. MUD61 0.01 4 0 G 2800682 Paraurantiacibacter 0.01 4 4 S 645517 Paraurantiacibacter namhicola 0.00 2 0 G 2800680 Alteriqipengyuania 0.00 2 2 S 3053610 Alteriqipengyuania flavescens 0.85 501 138 F 41297 Sphingomonadaceae 0.44 259 203 G 13687 Sphingomonas 0.02 10 2 G1 196159 unclassified Sphingomonas 0.01 3 3 S 3114300 Sphingomonas sp. M1-B02 0.00 1 1 S 2937787 Sphingomonas sp. SUN039 0.00 1 1 S 745310 Sphingomonas sp. MM-1 0.00 1 1 S 2804617 Sphingomonas sp. LHG3406-1 0.00 1 1 S 2735134 Sphingomonas sp. AP4-R1 0.00 1 1 S 2653203 Sphingomonas sp. CL5.1 0.02 9 9 S 386874 Sphingomonas sediminicola 0.01 7 7 S 2071607 Sphingomonas rhizophila 0.01 5 5 S 2594473 Sphingomonas xanthus 0.01 5 5 S 1541170 Sphingomonas morindae 0.01 4 4 S 2681549 Sphingomonas profundi 0.01 4 4 S 2714944 Sphingomonas sinipercae 0.00 2 2 S 13689 Sphingomonas paucimobilis 0.00 2 2 S 2714943 Sphingomonas piscis 0.00 2 2 S 2872652 Sphingomonas nostoxanthinifaciens 0.00 1 1 S 298708 Sphingomonas kaistensis 0.00 1 1 S 2764186 Sphingomonas sabuli 0.00 1 1 S 2319844 Sphingomonas paeninsulae 0.00 1 1 S 1176646 Sphingomonas daechungensis 0.00 1 1 S 1813468 Sphingomonas naphthae 0.00 1 1 S 2698828 Sphingomonas lacunae 0.08 45 15 G 165696 Novosphingobium 0.04 23 8 G1 2644732 unclassified Novosphingobium 0.01 8 8 S 2675225 Novosphingobium sp. Gsoil 351 0.01 7 7 S 3079861 Novosphingobium sp. ZN18A2 0.01 4 4 S 158500 Novosphingobium resinovorum 0.00 2 0 S 48935 Novosphingobium aromaticivorans 0.00 2 2 S1 279238 Novosphingobium aromaticivorans DSM 12444 0.00 1 1 S 2728851 Novosphingobium olei 0.04 23 1 G 1434046 Sphingorhabdus 0.02 12 12 S 392610 Sphingorhabdus lacus 0.02 10 10 S 1913578 Sphingorhabdus lutea 0.02 10 0 G 2676781 Aquisediminimonas 0.02 10 10 S 1550733 Aquisediminimonas profunda 0.02 9 8 G 165697 Sphingopyxis 0.00 1 0 G1 2614943 unclassified Sphingopyxis 0.00 1 1 S 2482763 Sphingopyxis sp. YF1 0.01 5 1 G 165695 Sphingobium 0.01 3 0 G1 2611147 unclassified Sphingobium 0.01 3 3 S 627192 Sphingobium sp. SYK-6 0.00 1 1 S 1592790 Sphingobium phenoxybenzoativorans 0.01 3 0 G 150203 Blastomonas 0.01 3 3 S 1867408 Blastomonas marina 0.01 3 0 G 2709685 Parasphingorhabdus 0.01 3 0 G1 2709687 unclassified Parasphingorhabdus 0.01 3 3 S 3071408 Parasphingorhabdus sp. SCSIO 66989 0.01 3 0 G 1763827 Hankyongella 0.01 3 3 S 1763828 Hankyongella ginsenosidimutans 0.00 2 2 G 1227948 Sphingomicrobium 0.00 1 0 G 2709686 Novosphingopyxis 0.00 1 1 S 2762729 Novosphingopyxis iocasae 0.02 12 0 F 2820280 Sphingosinicellaceae 0.01 6 0 G 335405 Sphingosinicella 0.01 4 4 S 335406 Sphingosinicella microcystinivorans 0.00 2 0 G1 2644549 unclassified Sphingosinicella 0.00 2 2 S 1892855 Sphingosinicella sp. BN140058 0.01 4 4 G 1508451 Polymorphobacter 0.00 2 0 G 2883109 Sandaracinobacteroides 0.00 2 2 S 2759707 Sandaracinobacteroides saxicola 0.06 37 0 O 204458 Caulobacterales 0.06 37 5 F 76892 Caulobacteraceae 0.02 11 0 G 20 Phenylobacterium 0.01 7 0 G1 2640670 unclassified Phenylobacterium 0.01 4 4 S 2903901 Phenylobacterium sp. LH3H17 0.01 3 3 S 3015177 Phenylobacterium sp. NIBR 498073 0.00 2 2 S 2201350 Phenylobacterium parvum 0.00 2 2 S 2823693 Phenylobacterium montanum 0.02 10 1 G 75 Caulobacter 0.02 9 9 S 69666 Caulobacter mirabilis 0.01 7 4 G 41275 Brevundimonas 0.01 3 3 S 172043 Brevundimonas nasdae 0.01 3 1 G 76890 Asticcacaulis 0.00 2 1 G1 2628350 unclassified Asticcacaulis 0.00 1 1 S 3157666 Asticcacaulis sp. MM231 0.00 1 0 G 2768684 Terricaulis 0.00 1 1 S 2686094 Terricaulis silvestris 0.04 24 0 O 1921002 Holosporales 0.03 18 0 F 1777752 Candidatus Paracaedibacteraceae 0.02 13 0 G 1521255 Candidatus Paracaedibacter 0.02 13 13 S 91604 Candidatus Paracaedibacter acanthamoebae 0.01 5 0 G 3163645 Candidatus Bodocaedibacter 0.01 5 5 S 2741701 Candidatus Bodocaedibacter vickermanii 0.01 6 0 F 2100208 Caedimonadaceae 0.01 6 0 G 1509243 Candidatus Nucleicultrix 0.01 6 0 S 1509244 Candidatus Nucleicultrix amoebiphila 0.01 6 6 S1 1414854 Candidatus Nucleicultrix amoebiphila FS5 0.03 19 0 O 2800060 Hyphomonadales 0.03 19 0 F 69657 Hyphomonadaceae 0.02 12 0 G 2892997 Candidatus Viadribacter 0.02 12 12 S 1759059 Candidatus Viadribacter manganicus 0.01 4 0 G 2723 Hirschia 0.01 4 0 S 2724 Hirschia baltica 0.01 4 4 S1 582402 Hirschia baltica ATCC 49814 0.01 3 2 G 85 Hyphomonas 0.00 1 0 G1 2630699 unclassified Hyphomonas 0.00 1 1 S 1873716 Hyphomonas sp. CACIAM 19H1 0.03 17 0 O 362534 Kordiimonadales 0.03 15 0 F 1549128 Temperatibacteraceae 0.03 15 0 G 1549129 Temperatibacter 0.03 15 15 S 1456591 Temperatibacter marinus 0.00 2 0 F 1331809 Kordiimonadaceae 0.00 2 0 G 288021 Kordiimonas 0.00 1 1 S 2161677 Kordiimonas pumila 0.00 1 0 G1 2618732 unclassified Kordiimonas 0.00 1 1 S 2829596 Kordiimonas sp. SCSIO 12603 0.02 9 0 O 766 Rickettsiales 0.01 4 0 F 775 Rickettsiaceae 0.01 3 1 F1 33988 Rickettsieae 0.00 2 0 G 780 Rickettsia 0.00 2 1 G1 114277 spotted fever group 0.00 1 0 G2 266068 Rickettsia sibirica subgroup 0.00 1 0 S 35793 Rickettsia sibirica 0.00 1 1 S1 272951 Rickettsia sibirica 246 0.00 1 0 G 2115980 Candidatus Phycorickettsia 0.00 1 1 S 2115978 Candidatus Phycorickettsia trachydisci 0.00 2 0 F 942 Anaplasmataceae 0.00 1 1 G 768 Anaplasma 0.00 1 0 F1 952 Wolbachieae 0.00 1 0 G 953 Wolbachia 0.00 1 1 G1 2640676 unclassified Wolbachia 0.00 2 0 F 1328881 Candidatus Midichloriaceae 0.00 1 0 G 411566 Candidatus Midichloria 0.00 1 0 S 234827 Candidatus Midichloria mitochondrii 0.00 1 1 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.00 1 0 G 1175554 Candidatus Lariskella 0.00 1 1 G1 2632605 unclassified Candidatus Lariskella 0.00 1 0 O1 1699067 unclassified Rickettsiales 0.00 1 1 S 2486578 Rickettsiales endosymbiont of Stachyamoeba lipophora 0.01 7 0 O 3108222 Geminicoccales 0.01 7 0 F 2066434 Geminicoccaceae 0.01 7 0 G 171436 Tistrella 0.01 7 0 S 171437 Tistrella mobilis 0.01 7 7 S1 1110502 Tistrella mobilis KA081020-065 0.01 5 0 O 2066490 Emcibacterales 0.01 5 0 F 2066491 Emcibacteraceae 0.01 4 0 G 2943291 Pseudemcibacter 0.01 4 4 S 2857064 Pseudemcibacter aquimaris 0.00 1 0 G 2813803 Luteithermobacter 0.00 1 1 S 2582913 Luteithermobacter gelatinilyticus 0.01 3 1 O 54526 Candidatus Pelagibacterales 0.00 2 0 F 1655514 Candidatus Pelagibacteraceae 0.00 2 2 G 198251 Candidatus Pelagibacter 0.00 1 0 O 255473 Parvularculales 0.00 1 1 F 255474 Parvularculaceae 4.76 2819 41 C 28216 Betaproteobacteria 4.08 2416 49 O 80840 Burkholderiales 1.84 1087 284 F 119060 Burkholderiaceae 0.51 301 205 G 32008 Burkholderia 0.08 47 9 G1 87882 Burkholderia cepacia complex 0.02 11 11 S 87883 Burkholderia multivorans 0.02 9 9 S 95485 Burkholderia stabilis 0.01 6 6 S 292 Burkholderia cepacia 0.01 3 3 S 488447 Burkholderia contaminans 0.00 2 2 S 60552 Burkholderia vietnamiensis 0.00 2 2 S 152480 Burkholderia ambifaria 0.00 2 2 S 179879 Burkholderia anthina 0.00 1 1 S 60550 Burkholderia pyrrocinia 0.00 1 0 S 95486 Burkholderia cenocepacia 0.00 1 1 S1 1055524 Burkholderia cenocepacia H111 0.00 1 0 S 101571 Burkholderia ubonensis 0.00 1 1 S1 265293 Burkholderia ubonensis subsp. mesacidophila 0.07 44 0 G1 111527 pseudomallei group 0.06 35 14 S 28450 Burkholderia pseudomallei 0.02 12 12 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.01 4 4 S1 1249473 Burkholderia pseudomallei MSHR491 0.01 3 3 S1 1437000 Burkholderia pseudomallei MSHR1153 0.00 2 2 S1 557724 Burkholderia pseudomallei 576 0.01 7 4 S 57975 Burkholderia thailandensis 0.01 3 3 S1 1249663 Burkholderia thailandensis H0587 0.00 2 2 S 342113 Burkholderia oklahomensis 0.01 5 0 G1 2613784 unclassified Burkholderia 0.01 4 4 S 2906514 Burkholderia sp. S-53 0.00 1 1 S 1468409 Burkholderia sp. 2002721687 0.28 163 2 G 48736 Ralstonia 0.26 153 1 G1 3116862 Ralstonia solanacearum species complex 0.25 149 149 S 305 Ralstonia solanacearum 0.01 3 3 S 1310165 Ralstonia pseudosolanacearum 0.01 8 0 G1 209769 unclassified Ralstonia 0.01 8 8 S 2880990 Ralstonia sp. RS650 0.21 126 0 G 2571160 Trinickia 0.21 126 126 S 28094 Trinickia caryophylli 0.15 88 88 G 131079 Limnobacter 0.08 49 49 G 2571159 Mycetohabitans 0.04 22 18 G 44013 Polynucleobacter 0.01 3 3 S 576610 Polynucleobacter necessarius 0.00 1 1 S 556054 Polynucleobacter difficilis 0.04 22 14 G 106589 Cupriavidus 0.01 8 8 S 367825 Cupriavidus malaysiensis 0.02 12 6 G 1822464 Paraburkholderia 0.01 3 3 S 75105 Paraburkholderia caribensis 0.00 1 1 S 92647 Paraburkholderia tropica 0.00 1 1 S 252970 Paraburkholderia phenoliruptrix 0.00 1 1 S 2547399 Paraburkholderia pallida 0.01 8 2 G 2018044 Candidatus Vallotia 0.01 6 6 S 1177213 Candidatus Vallotia tarda 0.01 5 0 G 47670 Lautropia 0.01 5 5 S 47671 Lautropia mirabilis 0.01 4 0 G 2038280 Robbsia 0.01 4 4 S 28092 Robbsia andropogonis 0.00 2 0 G 1827195 Caballeronia 0.00 2 0 G1 2646786 unclassified Caballeronia 0.00 2 2 S 2878152 Caballeronia sp. Sq4a 0.00 1 1 G 1810868 Mycoavidus 1.39 823 2 O1 224471 Burkholderiales genera incertae sedis 1.36 805 144 G 32012 Thiomonas 1.11 655 655 S 926 Thiomonas intermedia 0.01 6 0 G1 2625466 unclassified Thiomonas 0.01 3 3 S 1050370 Thiomonas sp. X19 0.01 3 3 S 2493107 Thiomonas sp. OC7 0.02 13 0 G 114248 Tepidimonas 0.02 13 13 S 307486 Tepidimonas taiwanensis 0.00 2 0 G 1597779 Eleftheria 0.00 2 2 S 1597781 Eleftheria terrae 0.00 1 0 G 212743 Rhizobacter 0.00 1 0 G1 2640088 unclassified Rhizobacter 0.00 1 1 S 2753607 Rhizobacter sp. AJA081-3 0.36 213 27 F 80864 Comamonadaceae 0.18 109 85 G 47420 Hydrogenophaga 0.04 22 5 G1 2610897 unclassified Hydrogenophaga 0.02 12 12 S 2565558 Hydrogenophaga sp. PAMC20947 0.01 4 4 S 2806347 Hydrogenophaga sp. SL48 0.00 1 1 S 795665 Hydrogenophaga sp. PBC 0.00 2 2 S 2716225 Hydrogenophaga crocea 0.03 18 8 G 283 Comamonas 0.01 7 7 S 2743470 Comamonas antarctica 0.00 1 0 S 32013 Comamonas terrigena 0.00 1 1 S1 1219032 Comamonas terrigena NBRC 13299 0.00 1 1 S 363952 Comamonas thiooxydans 0.00 1 0 G1 2638500 unclassified Comamonas 0.00 1 1 S 2853257 Comamonas sp. Y33R10-2 0.03 17 16 G 28065 Rhodoferax 0.00 1 0 G1 2627954 unclassified Rhodoferax 0.00 1 1 S 2741720 Rhodoferax sp. BAB1 0.02 11 9 G 12916 Acidovorax 0.00 2 0 G1 2684926 unclassified Acidovorax 0.00 2 2 S 2518343 Acidovorax sp. JMULE5 0.01 7 7 G 34072 Variovorax 0.01 6 0 G 219181 Ottowia 0.01 6 0 G1 2645081 unclassified Ottowia 0.01 6 6 S 1658672 Ottowia sp. oral taxon 894 0.01 6 0 G 352450 Simplicispira 0.01 6 6 S 2109915 Simplicispira suum 0.01 5 0 G 665874 Limnohabitans 0.01 5 2 G1 2626134 unclassified Limnohabitans 0.00 2 2 S 1751150 Limnohabitans sp. MORI2 0.00 1 1 S 1678129 Limnohabitans sp. 103DPR2 0.00 2 0 G 1436289 Candidatus Symbiobacter 0.00 2 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 2 2 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 1 0 G 2919468 Vandammella 0.00 1 1 S 2029117 Vandammella animalimorsus 0.00 1 0 G 2678886 Pulveribacter 0.00 1 1 S 2116657 Pulveribacter suum 0.00 1 0 G 238749 Diaphorobacter 0.00 1 1 S 3036128 Diaphorobacter limosus 0.00 1 0 G 52972 Polaromonas 0.00 1 1 S 37448 Polaromonas vacuolata 0.00 1 0 G 364316 Verminephrobacter 0.00 1 0 S 364317 Verminephrobacter eiseniae 0.00 1 1 S1 391735 Verminephrobacter eiseniae EF01-2 0.19 111 15 F 506 Alcaligenaceae 0.04 24 0 G 517 Bordetella 0.03 15 15 S 94624 Bordetella petrii 0.01 5 0 G1 2630031 unclassified Bordetella 0.01 5 5 S 1746199 Bordetella sp. N 0.01 3 3 S 123899 Bordetella trematum 0.00 1 1 S 520 Bordetella pertussis 0.04 21 0 G 359336 Castellaniella 0.04 21 0 S 75697 Castellaniella defragrans 0.04 21 21 S1 1437824 Castellaniella defragrans 65Phen 0.03 20 13 G 222 Achromobacter 0.01 5 5 S 85698 Achromobacter xylosoxidans 0.00 1 1 S 217203 Achromobacter spanius 0.00 1 1 S 217204 Achromobacter insolitus 0.02 12 0 G 1921582 Orrella 0.01 7 7 S 2782176 Orrella daihaiensis 0.01 5 5 S 1851544 Orrella dioscoreae 0.02 9 0 G 2987605 Neopusillimonas 0.02 9 9 S 2979868 Neopusillimonas aromaticivorans 0.01 4 0 G 305976 Pusillimonas 0.01 4 0 G1 2640016 unclassified Pusillimonas 0.01 4 4 S 2716226 Pusillimonas sp. DMV24BSW_D 0.00 2 0 G 1472344 Basilea 0.00 2 0 S 1472345 Basilea psittacipulmonis 0.00 2 2 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 1 0 G 290425 Advenella 0.00 1 1 S 1481665 Advenella alkanexedens 0.00 1 0 G 152267 Pigmentiphaga 0.00 1 1 S 1940612 Pigmentiphaga aceris 0.00 1 0 G 90243 Oligella 0.00 1 1 S 90244 Oligella ureolytica 0.00 1 0 G 29574 Taylorella 0.00 1 1 S 29575 Taylorella equigenitalis 0.15 87 2 F 75682 Oxalobacteraceae 0.10 61 49 G 963 Herbaspirillum 0.02 12 12 S 92645 Herbaspirillum frisingense 0.02 13 7 F1 2895353 Telluria group 0.01 5 4 G 149698 Massilia 0.00 1 0 G1 2609279 unclassified Massilia 0.00 1 1 S 3126507 Massilia sp. W12 0.00 1 1 G 1522432 Pseudoduganella 0.01 3 2 G 29580 Janthinobacterium 0.00 1 0 G1 2610881 unclassified Janthinobacterium 0.00 1 1 S 2497863 Janthinobacterium sp. 17J80-10 0.01 3 0 G 1344552 Noviherbaspirillum 0.01 3 0 G1 2617509 unclassified Noviherbaspirillum 0.01 3 3 S 2601898 Noviherbaspirillum sp. UKPF54 0.00 1 0 G 846 Oxalobacter 0.00 1 1 S 933080 Oxalobacter vibrioformis 0.00 1 0 G 202907 Collimonas 0.00 1 1 S 158899 Collimonas fungivorans 0.00 1 0 G 401469 Undibacterium 0.00 1 0 G1 2630295 unclassified Undibacterium 0.00 1 1 S 3048609 Undibacterium sp. CCC3.4 0.00 1 0 G 884214 Candidatus Zinderia 0.00 1 0 G1 3077950 unclassified Candidatus Zinderia 0.00 1 1 S 3077951 Candidatus Zinderia endosymbiont of Aphrophora alni 0.00 1 0 G 1051898 Actimicrobium 0.00 1 0 G1 2624959 unclassified Actimicrobium 0.00 1 1 S 3048606 Actimicrobium sp. CCC2.4 0.06 36 0 F 2975441 Sphaerotilaceae 0.02 11 10 G 196013 Caldimonas 0.00 1 1 S 376175 Schlegelella aquatica 0.02 10 0 G 1114981 Piscinibacter 0.01 6 6 S 946333 Piscinibacter gummiphilus 0.01 4 0 G1 2627988 unclassified Piscinibacter 0.01 4 4 S 3037797 Piscinibacter sp. XHJ-5 0.01 7 7 G 316612 Methylibium 0.01 4 0 G 34102 Sphaerotilus 0.01 3 3 S 639200 Sphaerotilus sulfidivorans 0.00 1 1 S 2914710 Sphaerotilus microaerophilus 0.00 1 0 G 88 Leptothrix 0.00 1 0 S 34029 Leptothrix cholodnii 0.00 1 1 S1 395495 Leptothrix cholodnii SP-6 0.00 1 0 G 36862 Ideonella 0.00 1 1 S 36863 Ideonella dechloratans 0.00 1 0 G 93681 Roseateles 0.00 1 0 G1 452439 environmental samples 0.00 1 1 S 452440 uncultured Roseateles sp. 0.00 1 0 G 391952 Aquincola 0.00 1 1 S 391953 Aquincola tertiaricarbonis 0.02 10 1 F 995019 Sutterellaceae 0.01 6 0 G 1980697 Duodenibacillus 0.01 6 6 S 1852381 Duodenibacillus massiliensis 0.01 3 0 G 40544 Sutterella 0.01 3 3 S 40545 Sutterella wadsworthensis 0.30 175 13 O 206389 Rhodocyclales 0.18 104 7 F 2008795 Azonexaceae 0.10 57 8 G 73029 Dechloromonas 0.05 32 32 S 281362 Dechloromonas denitrificans 0.03 17 0 G1 2633351 unclassified Dechloromonas 0.03 17 17 S 447588 Dechloromonas sp. A34 0.07 40 0 G 146936 Azonexus 0.07 40 40 S 418702 Azonexus hydrophilus 0.05 27 0 F 75787 Rhodocyclaceae 0.04 21 0 G 551759 Aromatoleum 0.04 21 21 S 76116 Aromatoleum petrolei 0.01 3 0 G 1769726 Niveibacterium 0.01 3 3 S 2811415 Niveibacterium microcysteis 0.00 2 0 G 146937 Azospira 0.00 1 1 S 404405 Azospira restricta 0.00 1 1 S 2785627 Azospira inquinata 0.00 1 0 G 1911577 Oryzomicrobium 0.00 1 1 S 1735038 Oryzomicrobium terrae 0.04 24 0 F 2808923 Fluviibacteraceae 0.04 24 0 G 2808942 Fluviibacter 0.04 24 24 S 1751046 Fluviibacter phosphoraccumulans 0.01 7 0 F 2008794 Zoogloeaceae 0.01 6 6 G 2891294 Nitrogeniibacter 0.00 1 0 G 2891324 Pseudothauera 0.00 1 1 S 2184083 Pseudothauera hydrothermalis 0.26 154 15 O 32003 Nitrosomonadales 0.09 52 24 F 32011 Methylophilaceae 0.02 13 0 G 2872156 Methyloradius 0.02 13 13 S 2778876 Methyloradius palustris 0.01 7 0 G 359407 Methylotenera 0.01 7 0 S 359408 Methylotenera mobilis 0.01 7 7 S1 583345 Methylotenera mobilis JLW8 0.01 4 2 G 16 Methylophilus 0.00 2 2 S 17 Methylophilus methylotrophus 0.01 3 0 G 1679002 Candidatus Methylopumilus 0.01 3 3 S 1581680 Candidatus Methylopumilus turicensis 0.00 1 1 G 81682 Methylovorus 0.05 31 15 F 206379 Nitrosomonadaceae 0.03 16 12 G 914 Nitrosomonas 0.00 2 2 S 44577 Nitrosomonas ureae 0.00 2 0 G1 2609265 unclassified Nitrosomonas 0.00 1 1 S 261292 Nitrosomonas sp. Is79A3 0.00 1 1 S 2741553 Nitrosomonas sp. H1_AOB3 0.03 19 0 F 2008790 Thiobacillaceae 0.02 10 6 G 919 Thiobacillus 0.01 4 0 G1 2646513 unclassified Thiobacillus 0.00 2 2 S 924 Thiobacillus sp. 0.00 2 2 S 3110231 Thiobacillus sp. SCUT-2 0.02 9 0 G 1938335 Sulfuritortus 0.02 9 9 S 1914471 Sulfuritortus calidifontis 0.02 14 0 F 2008793 Sterolibacteriaceae 0.01 4 0 G 1054211 Sulfuritalea 0.01 4 0 S 748811 Sulfuritalea hydrogenivorans 0.01 4 4 S1 1223802 Sulfuritalea hydrogenivorans sk43H 0.01 3 0 G 378210 Methyloversatilis 0.01 3 0 G1 2639971 unclassified Methyloversatilis 0.01 3 3 S 1842540 Methyloversatilis sp. RAC08 0.01 3 0 G 1914449 Rugosibacter 0.01 3 3 S 1565605 Rugosibacter aromaticivorans 0.00 2 0 G 157591 Sterolibacterium 0.00 2 2 S 157592 Sterolibacterium denitrificans 0.00 2 2 G 3050898 Sulfuricystis 0.02 9 0 F 2772226 Sulfuricellaceae 0.02 9 5 G 1778653 Sulfuriferula 0.01 4 4 S 171865 Sulfuriferula plumbiphila 0.01 7 3 F 90627 Gallionellaceae 0.00 2 2 G 453161 Candidatus Nitrotoga 0.00 2 0 G 1443590 Ferriphaselus 0.00 2 2 S 1188319 Ferriphaselus amnicola 0.01 7 0 F 2803844 Usitatibacteraceae 0.01 7 7 G 2803845 Usitatibacter 0.03 17 0 C1 119066 Betaproteobacteria incertae sedis 0.02 13 0 F 2705999 Casimicrobiaceae 0.02 13 0 G 2706000 Casimicrobium 0.02 13 13 S 2591109 Casimicrobium huifangae 0.00 2 2 G 33055 Candidatus Kinetoplastibacterium 0.00 1 0 G 1301080 Candidatus Nasuia 0.00 1 1 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 1 0 G 1381133 Candidatus Profftella 0.00 1 1 S 2661583 Candidatus Profftella armatura (Diaphorina cf. continua) 0.03 16 3 O 206351 Neisseriales 0.02 10 1 F 481 Neisseriaceae 0.01 4 1 G 482 Neisseria 0.01 3 0 G1 2623750 unclassified Neisseria 0.01 3 3 S 2912675 Neisseria sp. Dent CA1/247 0.00 2 1 G 59 Vitreoscilla 0.00 1 1 S 63 Vitreoscilla filiformis 0.00 2 0 G 2944815 Wielerella 0.00 2 2 S 2917790 Wielerella bovis 0.00 1 0 G 2593687 Aquella 0.00 1 1 S 2067065 Aquella oligotrophica 0.00 2 1 F 2897177 Chitinibacteraceae 0.00 1 1 G 400947 Deefgea 0.00 1 0 F 2897176 Aquaspirillaceae 0.00 1 0 G 57479 Microvirgula 0.00 1 1 S 57480 Microvirgula aerodenitrificans 0.00 1 0 C 1807140 Acidithiobacillia 0.00 1 0 O 225057 Acidithiobacillales 0.00 1 0 F 225058 Acidithiobacillaceae 0.00 1 1 G 119977 Acidithiobacillus 0.00 1 0 C 2008785 Hydrogenophilia 0.00 1 0 O 119069 Hydrogenophilales 0.00 1 0 F 206349 Hydrogenophilaceae 0.00 1 0 G 70774 Hydrogenophilus 0.00 1 1 S 297 Hydrogenophilus thermoluteolus 5.26 3111 0 P 57723 Acidobacteriota 5.25 3109 0 C 204432 Terriglobia 5.25 3105 0 O 204433 Terriglobales 5.23 3095 746 F 204434 Acidobacteriaceae 3.62 2142 27 G 392733 Terriglobus 3.46 2050 3 S 392734 Terriglobus roseus 3.46 2047 2047 S1 926566 Terriglobus roseus DSM 18391 0.11 65 0 S 870903 Terriglobus saanensis 0.11 65 65 S1 401053 Terriglobus saanensis SP1PR4 0.24 141 0 G 1742983 Occallatibacter 0.24 141 141 S 1002689 Occallatibacter riparius 0.07 39 4 G 940557 Granulicella 0.04 23 0 S 940615 Granulicella tundricola 0.04 23 23 S1 1198114 Granulicella tundricola MP5ACTX9 0.02 11 0 G1 2621151 unclassified Granulicella 0.01 7 7 S 2602070 Granulicella sp. WH15 0.01 4 4 S 1617967 Granulicella sp. 5B5 0.00 1 0 S 940614 Granulicella mallensis 0.00 1 1 S1 682795 Granulicella mallensis MP5ACTX8 0.03 16 0 G 33973 Acidobacterium 0.03 16 0 S 33075 Acidobacterium capsulatum 0.03 16 16 S1 240015 Acidobacterium capsulatum ATCC 51196 0.01 5 0 G 3154218 Tunturibacter 0.01 5 5 S 3069689 Tunturibacter gelidoferens 0.01 3 0 G 388463 Edaphobacter 0.01 3 1 G1 2637509 unclassified Edaphobacter 0.00 2 2 S 2763071 Edaphobacter sp. 4G125 0.01 3 0 G 2608728 Acidisarcina 0.01 3 3 S 2211140 Acidisarcina polymorpha 0.02 10 0 F 3121618 Candidatus Korobacteraceae 0.02 10 0 G 658061 Candidatus Korobacter 0.02 10 0 S 658062 Candidatus Korobacter versatilis 0.02 10 10 S1 204669 Candidatus Koribacter versatilis Ellin345 0.01 4 0 O 332160 Bryobacterales 0.01 4 0 F 1962910 Bryobacteraceae 0.01 4 4 G 1649475 Paludibaculum 0.00 2 0 C 533205 Holophagae 0.00 2 0 O 574975 Holophagales 0.00 2 0 F 574976 Holophagaceae 0.00 2 0 G 44675 Geothrix 0.00 2 0 G1 2647902 unclassified Geothrix 0.00 1 1 S 3068640 Geothrix sp. PMB-07 0.00 1 1 S 3068889 Geothrix sp. 21YS21S-4 0.78 459 3 D1 1783272 Terrabacteria group 0.39 230 2 P 1239 Bacillota 0.31 181 0 C 91061 Bacilli 0.26 152 12 O 1385 Bacillales 0.10 57 3 F 186822 Paenibacillaceae 0.07 42 18 G 44249 Paenibacillus 0.01 8 0 G1 185978 unclassified Paenibacillus 0.01 5 5 S 2996034 Paenibacillus sp. SYP-B4298 0.00 2 2 S 1306526 Paenibacillus sp. HWE-109 0.00 1 1 S 2954512 Paenibacillus sp. FSL K6-1122 0.01 7 7 S 1178515 Paenibacillus swuensis 0.00 2 2 S 1406 Paenibacillus polymyxa 0.00 2 2 S 2020716 Paenibacillus konkukensis 0.00 1 1 S 682956 Paenibacillus jilunlii 0.00 1 1 S 1712516 Paenibacillus baekrokdamisoli 0.00 1 1 S 116718 Paenibacillus azoreducens 0.00 1 1 S 2908839 Paenibacillus hexagrammi 0.00 1 1 S 562959 Paenibacillus cellulositrophicus 0.01 5 1 G 329857 Cohnella 0.00 2 2 S 2728023 Cohnella herbarum 0.00 1 1 S 2598458 Cohnella cholangitidis 0.00 1 1 S 2674991 Cohnella candidum 0.01 4 4 G 55080 Brevibacillus 0.01 3 0 F1 85151 Aneurinibacillus group 0.01 3 2 G 55079 Aneurinibacillus 0.00 1 1 S 1500254 Aneurinibacillus soli 0.07 41 0 F 186823 Alicyclobacillaceae 0.07 41 0 G 29330 Alicyclobacillus 0.04 21 21 S 2931921 Alicyclobacillus mengziensis 0.02 14 0 G1 2622400 unclassified Alicyclobacillus 0.02 11 11 S 2665646 Alicyclobacillus sp. SO9 0.00 2 2 S 2796143 Alicyclobacillus sp. ALC3 0.00 1 1 S 2606450 Alicyclobacillus sp. TC 0.01 5 5 S 1457 Alicyclobacillus cycloheptanicus 0.00 1 1 S 1475485 Alicyclobacillus dauci 0.05 30 2 F 186817 Bacillaceae 0.03 16 12 G 150247 Anoxybacillus 0.01 4 0 S 33934 Anoxybacillus flavithermus 0.01 4 4 S1 491915 Anoxybacillus flavithermus WK1 0.01 7 0 G 1386 Bacillus 0.01 3 0 G1 653685 Bacillus subtilis group 0.01 3 0 G2 1938374 Bacillus amyloliquefaciens group 0.01 3 3 S 492670 Bacillus velezensis 0.01 3 0 G1 1792192 Bacillus altitudinis complex 0.01 3 3 S 293387 Bacillus altitudinis 0.00 1 0 G1 86661 Bacillus cereus group 0.00 1 1 S 1396 Bacillus cereus 0.00 2 0 G 400634 Lysinibacillus 0.00 1 1 S 436516 Lysinibacillus parviboronicapiens 0.00 1 1 S 2086577 Lysinibacillus timonensis 0.00 1 0 G 2675229 Peribacillus 0.00 1 1 S 228899 Peribacillus asahii 0.00 1 1 G 129337 Geobacillus 0.00 1 0 G 2800373 Priestia 0.00 1 1 S 412384 Priestia aryabhattai 0.02 9 0 F 90964 Staphylococcaceae 0.02 9 0 G 1279 Staphylococcus 0.01 5 5 S 1280 Staphylococcus aureus 0.00 2 2 S 1290 Staphylococcus hominis 0.00 1 1 S 70255 Staphylococcus condimenti 0.00 1 1 S 45972 Staphylococcus pasteuri 0.01 3 0 O1 539002 Bacillales incertae sedis 0.01 3 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.01 3 3 G 33986 Exiguobacterium 0.05 29 0 O 186826 Lactobacillales 0.04 23 0 F 81852 Enterococcaceae 0.04 23 0 G 1350 Enterococcus 0.04 23 22 S 1351 Enterococcus faecalis 0.00 1 1 S1 1201292 Enterococcus faecalis ATCC 29212 0.01 6 2 F 33958 Lactobacillaceae 0.00 1 0 G 1578 Lactobacillus 0.00 1 1 S 147802 Lactobacillus iners 0.00 1 0 G 2759736 Lacticaseibacillus 0.00 1 1 S 47715 Lacticaseibacillus rhamnosus 0.00 1 1 G 2767887 Ligilactobacillus 0.00 1 1 G 1243 Leuconostoc 0.08 47 3 C 186801 Clostridia 0.05 32 1 O 186802 Eubacteriales 0.02 14 1 F 31979 Clostridiaceae 0.02 12 8 G 1485 Clostridium 0.00 1 1 S 46867 Clostridium chauvoei 0.00 1 1 S 29341 Clostridium argentinense 0.00 1 1 S 1501 Clostridium pasteurianum 0.00 1 1 S 1502 Clostridium perfringens 0.00 1 0 G 1848399 Crassaminicella 0.00 1 1 S 2855394 Crassaminicella indica 0.01 7 1 F 216572 Oscillospiraceae 0.00 2 0 G 946234 Flavonifractor 0.00 2 2 S 292800 Flavonifractor plautii 0.00 1 0 G 3048127 Thermocaproicibacter 0.00 1 1 S 2966552 Thermocaproicibacter melissae 0.00 1 0 G 2892396 Vescimonas 0.00 1 1 S 2714353 Vescimonas fastidiosa 0.00 1 0 G 2304687 Petroclostridium 0.00 1 0 G1 2619260 unclassified Petroclostridium 0.00 1 1 S 3045146 Petroclostridium sp. X23 0.00 1 0 G 1263 Ruminococcus 0.00 1 1 G1 2608920 unclassified Ruminococcus 0.01 3 0 F 68298 Syntrophomonadaceae 0.01 3 0 G 129001 Syntrophothermus 0.01 3 0 S 86170 Syntrophothermus lipocalidus 0.01 3 3 S1 643648 Syntrophothermus lipocalidus DSM 12680 0.00 2 2 F 31984 Heliobacteriaceae 0.00 2 1 F 186806 Eubacteriaceae 0.00 1 0 G 1730 Eubacterium 0.00 1 1 S 39496 Eubacterium ventriosum 0.00 1 0 F 186807 Peptococcaceae 0.00 1 1 G 2916693 Desulforamulus 0.00 1 0 F 3082771 Acutalibacteraceae 0.00 1 0 G 1738645 Caproiciproducens 0.00 1 0 G1 2643836 unclassified Caproiciproducens 0.00 1 1 S 3030017 Caproiciproducens sp. CPB-2 0.00 1 0 F 3046368 Aristaeellaceae 0.00 1 0 G 3046369 Aristaeella 0.00 1 1 S 3046382 Aristaeella hokkaidonensis 0.02 9 0 O 3082720 Peptostreptococcales 0.01 3 2 F 186804 Peptostreptococcaceae 0.00 1 1 G 1505652 Terrisporobacter 0.01 3 0 F 3030910 Anaerovoracaceae 0.01 3 1 G 2060094 Aminipila 0.00 1 1 S 433296 Aminipila butyrica 0.00 1 1 S 2507160 Aminipila luticellarii 0.00 2 0 F 3118655 Filifactoraceae 0.00 1 0 G 44259 Filifactor 0.00 1 0 S 143361 Filifactor alocis 0.00 1 1 S1 546269 Filifactor alocis ATCC 35896 0.00 1 0 G 186831 Acetoanaerobium 0.00 1 1 S 1511 Acetoanaerobium sticklandii 0.00 1 0 F 3118656 Natronincolaceae 0.00 1 0 G 1890059 Serpentinicella 0.00 1 1 S 1734049 Serpentinicella alkaliphila 0.01 3 0 O 3085636 Lachnospirales 0.01 3 0 F 186803 Lachnospiraceae 0.00 1 0 G 841 Roseburia 0.00 1 0 G1 2637578 unclassified Roseburia 0.00 1 1 S 1261634 Roseburia sp. 499 0.00 1 0 G 2997360 Anaeropeptidivorans 0.00 1 1 S 2934315 Anaeropeptidivorans aminofermentans 0.00 1 0 G 248744 Marvinbryantia 0.00 1 0 S 168384 Marvinbryantia formatexigens 0.00 1 1 S1 478749 Marvinbryantia formatexigens DSM 14469 0.29 169 0 P 201174 Actinomycetota 0.25 149 1 C 1760 Actinomycetes 0.14 80 1 O 85006 Micrococcales 0.11 67 42 F 85023 Microbacteriaceae 0.02 9 0 G 1759331 Cnuibacter 0.02 9 9 S 1619308 Cnuibacter physcomitrellae 0.01 6 3 G 33877 Agromyces 0.00 2 0 G1 2639701 unclassified Agromyces 0.00 2 2 S 3156399 Agromyces sp. G08B096 0.00 1 1 S 1858653 Agromyces mangrovi 0.01 3 3 G 1705353 Aurantimicrobium 0.00 2 0 G 33882 Microbacterium 0.00 1 1 S 3028316 Microbacterium horticulturae 0.00 1 0 G1 2609290 unclassified Microbacterium 0.00 1 1 S 2962064 Microbacterium sp. M28 0.00 2 0 F1 1655488 Luna cluster 0.00 2 1 F2 1655489 Luna-1 subcluster 0.00 1 0 G 529881 Aquiluna 0.00 1 1 G1 2617988 unclassified Aquiluna 0.00 1 0 G 3108736 Antiquaquibacter 0.00 1 1 S 2880260 Antiquaquibacter oligotrophicus 0.00 1 1 G 55968 Leucobacter 0.00 1 0 G 1434022 Naasia 0.00 1 1 S 1162966 Naasia aerilata 0.01 6 1 F 1268 Micrococcaceae 0.01 3 1 G 1663 Arthrobacter 0.00 2 0 G1 235627 unclassified Arthrobacter 0.00 2 2 S 2828862 Arthrobacter sp. Helios 0.00 1 0 G 1742993 Pseudarthrobacter 0.00 1 0 G1 2647000 unclassified Pseudarthrobacter 0.00 1 1 S 2973976 Pseudarthrobacter sp. NS4 0.00 1 1 G 1269 Micrococcus 0.01 5 0 F 145357 Dermacoccaceae 0.01 5 0 G 908935 Yimella 0.01 5 0 G1 2649892 unclassified Yimella 0.01 5 5 S 2770551 Yimella sp. cx-51 0.00 1 0 F 85020 Dermabacteraceae 0.00 1 1 G 43668 Brachybacterium 0.06 34 1 O 85007 Mycobacteriales 0.04 21 0 F 85026 Gordoniaceae 0.04 21 18 G 2053 Gordonia 0.00 2 2 S 2055 Gordonia terrae 0.00 1 0 G1 2657482 unclassified Gordonia (in: high G+C Gram-positive bacteria) 0.00 1 1 S 2742602 Gordonia sp. X0973 0.01 7 0 F 1653 Corynebacteriaceae 0.01 7 2 G 1716 Corynebacterium 0.01 4 4 S 679663 Corynebacterium canis 0.00 1 0 G1 2624378 unclassified Corynebacterium 0.00 1 1 S 1487956 Corynebacterium sp. ATCC 6931 0.01 5 3 F 1762 Mycobacteriaceae 0.00 1 0 G 1763 Mycobacterium 0.00 1 0 G1 77643 Mycobacterium tuberculosis complex 0.00 1 1 S 1773 Mycobacterium tuberculosis 0.00 1 0 G 1866885 Mycolicibacterium 0.00 1 0 S 46351 Mycolicibacterium hassiacum 0.00 1 1 S1 1122247 Mycolicibacterium hassiacum DSM 44199 0.01 8 0 O 85011 Kitasatosporales 0.01 8 0 F 2062 Streptomycetaceae 0.01 8 1 G 1883 Streptomyces 0.01 4 0 G1 2839105 Streptomyces violaceusniger group 0.01 4 4 S 1226757 Streptomyces rapamycinicus 0.00 1 1 S 887464 Streptomyces laculatispora 0.00 1 1 S 67304 Streptomyces griseorubiginosus 0.00 1 0 G1 2593676 unclassified Streptomyces 0.00 1 1 S 2975784 Streptomyces sp. NBC_00588 0.01 7 3 O 85009 Propionibacteriales 0.01 3 0 F 85015 Nocardioidaceae 0.01 3 0 G 1839 Nocardioides 0.01 3 1 G1 2615069 unclassified Nocardioides 0.00 1 1 S 2763008 Nocardioides sp. zg-1228 0.00 1 1 S 2840457 Nocardioides sp. LMS-CY 0.00 1 0 F 31957 Propionibacteriaceae 0.00 1 0 G 1912216 Cutibacterium 0.00 1 1 S 1747 Cutibacterium acnes 0.01 5 0 O 85004 Bifidobacteriales 0.01 5 0 F 31953 Bifidobacteriaceae 0.01 5 2 G 1678 Bifidobacterium 0.00 2 0 S 216816 Bifidobacterium longum 0.00 2 2 S1 1679 Bifidobacterium longum subsp. longum 0.00 1 0 S 158787 Bifidobacterium scardovii 0.00 1 1 S1 1150461 Bifidobacterium scardovii JCM 12489 = DSM 13734 0.01 5 0 O 2039638 Candidatus Nanopelagicales 0.01 5 0 F 2162846 Candidatus Nanopelagicaceae 0.01 4 2 G 2039639 Candidatus Nanopelagicus 0.00 2 2 S 1884915 Candidatus Nanopelagicus hibericus 0.00 1 0 G 622681 Candidatus Planktophila 0.00 1 1 S 1884913 Candidatus Planktophila lacus 0.01 4 0 O 85012 Streptosporangiales 0.01 3 0 F 2012 Thermomonosporaceae 0.01 3 0 G 2019 Thermomonospora 0.01 3 0 S 2020 Thermomonospora curvata 0.01 3 3 S1 471852 Thermomonospora curvata DSM 43183 0.00 1 0 F 2004 Streptosporangiaceae 0.00 1 0 G 147067 Thermobispora 0.00 1 1 S 2006 Thermobispora bispora 0.01 3 0 O 1643682 Geodermatophilales 0.01 3 0 F 85030 Geodermatophilaceae 0.01 3 0 G 38501 Blastococcus 0.01 3 0 G1 2619396 unclassified Blastococcus 0.01 3 3 S 3144973 Blastococcus sp. HT6-4 0.00 1 0 O 85008 Micromonosporales 0.00 1 0 F 28056 Micromonosporaceae 0.00 1 1 G 1873 Micromonospora 0.00 1 0 O 85010 Pseudonocardiales 0.00 1 0 F 2070 Pseudonocardiaceae 0.00 1 1 G 2071 Saccharothrix 0.02 11 0 C 84992 Acidimicrobiia 0.02 11 0 O 84993 Acidimicrobiales 0.01 7 0 F 2448023 Ilumatobacteraceae 0.01 7 0 G 682522 Ilumatobacter 0.01 7 0 S 467094 Ilumatobacter coccineus 0.01 7 7 S1 1313172 Ilumatobacter coccineus YM16-304 0.01 4 0 F 633392 Iamiaceae 0.00 2 0 G 2789775 Actinomarinicola 0.00 2 2 S 2789776 Actinomarinicola tropica 0.00 2 0 G 3075137 Dermatobacter 0.00 2 2 S 2884263 Dermatobacter hominis 0.01 5 0 C 84998 Coriobacteriia 0.01 3 0 O 84999 Coriobacteriales 0.00 2 0 F 1643824 Atopobiaceae 0.00 2 0 G 1380 Atopobium 0.00 2 0 G1 2643817 unclassified Atopobium 0.00 2 2 S 712157 Atopobium sp. oral taxon 416 0.00 1 0 F 84107 Coriobacteriaceae 0.00 1 0 G 1472762 Enorma 0.00 1 1 S 1871019 Enorma phocaeensis 0.00 2 0 O 1643822 Eggerthellales 0.00 2 2 F 1643826 Eggerthellaceae 0.01 4 0 C 1497346 Thermoleophilia 0.00 2 1 O 588673 Solirubrobacterales 0.00 1 0 F 2600303 Baekduiaceae 0.00 1 1 G 2600304 Baekduia 0.00 1 0 O 588674 Thermoleophilales 0.00 1 0 F 320796 Thermoleophilaceae 0.00 1 0 G 192992 Thermoleophilum 0.00 1 1 S 29539 Thermoleophilum album 0.00 1 0 O 2843198 Miltoncostaeales 0.00 1 0 F 2843199 Miltoncostaeaceae 0.00 1 1 G 2843200 Miltoncostaea 0.06 34 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.06 34 1 P 1117 Cyanobacteriota 0.06 33 1 C 3028117 Cyanophyceae 0.03 17 0 O 3079749 Leptolyngbyales 0.03 17 0 F 1890438 Leptolyngbyaceae 0.03 16 0 F1 3081713 Leptolyngbya group 0.03 16 0 G 47251 Leptolyngbya 0.03 16 0 G1 2650499 unclassified Leptolyngbya 0.03 16 16 S 2812896 Leptolyngbya sp. 7M 0.00 1 0 G 2917830 Leptothermofonsia 0.00 1 0 S 2917832 Leptothermofonsia sichuanensis 0.00 1 1 S1 2016068 Leptothermofonsia sichuanensis E412 0.01 5 1 C1 1301283 Oscillatoriophycideae 0.01 3 0 O 1150 Oscillatoriales 0.01 3 0 F 1892254 Oscillatoriaceae 0.00 2 0 G 1158 Oscillatoria 0.00 2 0 S 482564 Oscillatoria nigro-viridis 0.00 2 2 S1 179408 Oscillatoria nigro-viridis PCC 7112 0.00 1 0 G 1155738 Moorena 0.00 1 1 S 1155739 Moorena producens 0.00 1 0 O 1118 Chroococcales 0.00 1 0 F 2815910 Geminocystaceae 0.00 1 0 G 3079908 Picosynechococcus 0.00 1 1 G1 3079910 unclassified Picosynechococcus 0.01 5 1 O 1890424 Synechococcales 0.01 4 0 F 2881426 Prochlorococcaceae 0.01 4 0 G 167375 Cyanobium 0.00 2 0 S 59930 Cyanobium gracile 0.00 2 2 S1 292564 Cyanobium gracile PCC 6307 0.00 2 0 S 2304190 Cyanobium usitatum 0.00 2 2 S1 2116684 Cyanobium usitatum str. Tous 0.00 2 0 O 1161 Nostocales 0.00 2 0 F 2661849 Calotrichaceae 0.00 2 0 G 1186 Calothrix 0.00 2 0 G1 2619626 unclassified Calothrix 0.00 2 2 S 1337936 Calothrix sp. 336/3 0.00 1 1 O 307595 Gloeobacterales 0.00 1 0 O 3079744 Acaryochloridales 0.00 1 0 F 1890429 Acaryochloridaceae 0.00 1 0 G 155977 Acaryochloris 0.00 1 0 G1 2631661 unclassified Acaryochloris 0.00 1 1 S 2740837 Acaryochloris sp. 'Moss Beach' 0.00 1 0 O 3079753 Coleofasciculales 0.00 1 0 F 1892251 Coleofasciculaceae 0.00 1 0 G 2886347 Allocoleopsis 0.00 1 0 S 2886352 Allocoleopsis franciscana 0.00 1 1 S1 1173027 Allocoleopsis franciscana PCC 7113 0.03 19 2 P 200795 Chloroflexota 0.02 12 0 C 292625 Anaerolineae 0.02 12 0 O 292629 Anaerolineales 0.02 12 0 F 292628 Anaerolineaceae 0.01 4 0 G 233189 Anaerolinea 0.01 4 0 S 167964 Anaerolinea thermophila 0.01 4 4 S1 926569 Anaerolinea thermophila UNI-1 0.01 4 0 G 1649478 Pelolinea 0.01 4 4 S 913107 Pelolinea submarina 0.01 4 0 G 2019482 Brevefilum 0.01 4 4 S 1986204 Brevefilum fermentans 0.00 2 0 C 475962 Caldilineae 0.00 2 0 O 475963 Caldilineales 0.00 2 0 F 475964 Caldilineaceae 0.00 2 0 G 233191 Caldilinea 0.00 2 0 S 133453 Caldilinea aerophila 0.00 2 2 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.00 2 0 C 2682225 Tepidiformia 0.00 2 0 O 2682226 Tepidiformales 0.00 2 0 F 2682227 Tepidiformaceae 0.00 2 2 G 2682228 Tepidiforma 0.00 1 0 C 301297 Dehalococcoidia 0.00 1 0 C1 648176 SAR202 cluster 0.00 1 0 O 3143247 Candidatus Lucifugimonadales 0.00 1 0 F 3143248 Candidatus Lucifugimonadaceae 0.00 1 0 G 3143249 Candidatus Lucifugimonas 0.00 1 1 S 3038979 Candidatus Lucifugimonas marina 0.01 4 1 P 544448 Mycoplasmatota 0.00 2 0 O 2790996 Mycoplasmoidales 0.00 2 1 F 2895623 Metamycoplasmataceae 0.00 1 0 G 2923352 Mesomycoplasma 0.00 1 0 S 2118 [Mycoplasma] mobile 0.00 1 1 S1 267748 Mycoplasma mobile 163K 0.00 1 0 C 31969 Mollicutes 0.00 1 0 O 186328 Entomoplasmatales 0.00 1 0 F 2131 Spiroplasmataceae 0.00 1 0 G 2132 Spiroplasma 0.00 1 0 G1 2637901 unclassified Spiroplasma 0.00 1 1 S 3066313 Spiroplasma endosymbiont of Zeiraphera isertana 0.44 258 0 D1 1783270 FCB group 0.42 251 0 D2 68336 Bacteroidota/Chlorobiota group 0.41 244 5 P 976 Bacteroidota 0.12 70 0 C 1853228 Chitinophagia 0.12 70 0 O 1853229 Chitinophagales 0.12 70 3 F 563835 Chitinophagaceae 0.04 21 2 G 2698688 Paraflavitalea 0.03 19 19 S 2315862 Paraflavitalea soli 0.02 11 3 G 1004301 Flavihumibacter 0.01 8 8 S 2838157 Flavihumibacter fluvii 0.02 10 0 G 1860196 Pseudobacter 0.02 10 10 S 661488 Pseudobacter ginsenosidimutans 0.01 5 1 G 379899 Niabella 0.00 2 2 S 1176587 Niabella ginsenosidivorans 0.00 1 0 S 446683 Niabella soli 0.00 1 1 S1 929713 Niabella soli DSM 19437 0.00 1 1 S 577386 Niabella yanshanensis 0.01 4 0 G 649461 Lacibacter 0.01 4 4 S 2760713 Lacibacter sediminis 0.01 4 1 G 1004303 Ferruginibacter 0.00 2 2 S 2875540 Ferruginibacter albus 0.00 1 1 S 563172 Ferruginibacter lapsinanis 0.01 3 0 G 504481 Sediminibacterium 0.01 3 0 G1 2635961 unclassified Sediminibacterium 0.00 2 2 S 575378 Sediminibacterium sp. TEGAF015 0.00 1 1 S 1751071 Sediminibacterium sp. KACHI17 0.01 3 0 G 1649506 Thermoflavifilum 0.01 3 0 G1 3099314 unclassified Thermoflavifilum 0.01 3 3 S 1968839 Thermoflavifilum sp. 0.00 2 0 G 398041 Flavisolibacter 0.00 2 2 S 661481 Flavisolibacter ginsenosidimutans 0.00 1 0 G 79328 Chitinophaga 0.00 1 0 G1 2619133 unclassified Chitinophaga 0.00 1 1 S 2952571 Chitinophaga sp. HK235 0.00 1 0 G 2836216 Phnomibacter 0.00 1 1 S 2676868 Phnomibacter ginsenosidimutans 0.00 1 1 G 1769012 Arachidicoccus 0.00 1 0 G 2812019 Pseudocnuella 0.00 1 1 S 2502779 Pseudocnuella soli 0.09 56 0 C 117747 Sphingobacteriia 0.09 56 0 O 200666 Sphingobacteriales 0.09 56 0 F 84566 Sphingobacteriaceae 0.07 44 28 G 28453 Sphingobacterium 0.02 14 13 G1 2609468 unclassified Sphingobacterium 0.00 1 1 S 2996035 Sphingobacterium sp. SYP-B4668 0.00 1 1 S 259 Sphingobacterium thalpophilum 0.00 1 1 S 662858 Sphingobacterium bambusae 0.02 9 0 G 423349 Mucilaginibacter 0.01 6 6 S 2740462 Mucilaginibacter mali 0.00 1 1 S 652787 Mucilaginibacter mallensis 0.00 1 1 S 862126 Mucilaginibacter ginsenosidivorax 0.00 1 1 S 2682091 Mucilaginibacter ginkgonis 0.01 3 2 G 84567 Pedobacter 0.00 1 1 S 2605747 Pedobacter aquae 0.06 37 0 C 117743 Flavobacteriia 0.06 37 0 O 200644 Flavobacteriales 0.04 22 2 F 49546 Flavobacteriaceae 0.02 13 10 G 237 Flavobacterium 0.00 1 1 S 1306519 Flavobacterium commune 0.00 1 1 S 2294119 Flavobacterium psychrotrophum 0.00 1 1 S 1678728 Flavobacterium kingsejongi 0.00 2 0 G 363408 Nonlabens 0.00 2 0 S 328515 Nonlabens dokdonensis 0.00 2 2 S1 592029 Nonlabens dokdonensis DSW-6 0.00 1 0 G 417127 Zunongwangia 0.00 1 0 G1 2632541 unclassified Zunongwangia 0.00 1 1 S 2779359 Zunongwangia sp. SCSIO 43204 0.00 1 0 G 1386924 Aestuariibaculum 0.00 1 0 G1 2646735 unclassified Aestuariibaculum 0.00 1 1 S 3070659 Aestuariibaculum sp. YM273 0.00 1 0 G 2058174 Antarcticibacterium 0.00 1 1 S 2585771 Antarcticibacterium arcticum 0.00 1 0 G 358023 Lutibacter 0.00 1 1 S 1622118 Lutibacter profundi 0.00 1 0 G 76831 Myroides 0.00 1 0 G1 2642485 unclassified Myroides 0.00 1 1 S 3119977 Myroides sp. JBRI-B21084 0.02 12 0 F 2762318 Weeksellaceae 0.02 12 0 F1 2782232 Chryseobacterium group 0.02 11 0 G 59732 Chryseobacterium 0.01 7 7 S 192389 Chryseobacterium daecheongense 0.00 2 2 S 1493872 Chryseobacterium shandongense 0.00 1 0 G1 2593645 unclassified Chryseobacterium 0.00 1 1 S 2864040 Chryseobacterium sp. LJ668 0.00 1 1 S 1265445 Chryseobacterium camelliae 0.00 1 0 G 2782231 Kaistella 0.00 1 1 S 2820270 Candidatus Kaistella beijingensis 0.00 2 0 F 39782 Blattabacteriaceae 0.00 2 2 G 34098 Blattabacterium 0.00 1 0 F 1853230 Crocinitomicaceae 0.00 1 0 G 332102 Fluviicola 0.00 1 0 S 191579 Fluviicola taffensis 0.00 1 1 S1 755732 Fluviicola taffensis DSM 16823 0.05 29 0 C 768503 Cytophagia 0.05 29 0 O 768507 Cytophagales 0.02 9 0 F 89373 Cytophagaceae 0.02 9 0 G 107 Spirosoma 0.01 8 8 S 2666025 Spirosoma endbachense 0.00 1 0 G1 2621999 unclassified Spirosoma 0.00 1 1 S 3128900 Spirosoma sp. SC4-14 0.01 6 0 F 2896860 Spirosomataceae 0.01 5 2 G 120831 Dyadobacter 0.00 2 2 S 2906456 Dyadobacter chenwenxiniae 0.00 1 0 S 94254 Dyadobacter fermentans 0.00 1 1 S1 471854 Dyadobacter fermentans DSM 18053 0.00 1 0 G 332157 Larkinella 0.00 1 1 S 332158 Larkinella insperata 0.01 4 0 F 1501348 Amoebophilaceae 0.01 4 0 G 281119 Candidatus Amoebophilus 0.01 4 0 S 281120 Candidatus Amoebophilus asiaticus 0.01 4 4 S1 452471 Candidatus Amoebophilus asiaticus 5a2 0.01 3 0 F 2762286 Fulvivirgaceae 0.01 3 0 G 1433993 Chryseolinea 0.01 3 3 S 2321403 Chryseolinea soli 0.00 2 0 F 3141701 Flectobacillaceae 0.00 2 0 G 2676247 Aquirufa 0.00 2 2 S 2516557 Aquirufa nivalisilvae 0.00 2 0 F 3141702 Leadbetterellaceae 0.00 2 0 G 2975149 Marinilongibacter 0.00 2 2 S 2975157 Marinilongibacter aquaticus 0.00 1 0 F 563798 Cyclobacteriaceae 0.00 1 0 G 246875 Algoriphagus 0.00 1 1 S 1727163 Algoriphagus sanaruensis 0.00 1 0 F 1853232 Hymenobacteraceae 0.00 1 1 G 89966 Hymenobacter 0.00 1 0 F 1853234 Persicobacteraceae 0.00 1 0 G 59740 Persicobacter 0.00 1 1 S 387638 Persicobacter psychrovividus 0.04 25 0 P1 171558 Bacteroidetes incertae sedis 0.04 25 0 O 2923288 Candidatus Sulfidibacteriales 0.04 25 0 G 2923290 Candidatus Sulfidibacterium 0.04 25 25 S 2875962 Candidatus Sulfidibacterium hydrothermale 0.03 17 0 C 200643 Bacteroidia 0.02 11 0 O 171549 Bacteroidales 0.01 5 0 F 171551 Porphyromonadaceae 0.01 4 0 G 1159323 Macellibacteroides 0.01 4 0 G1 1243006 environmental samples 0.01 4 4 S 1243007 uncultured Macellibacteroides sp. 0.00 1 0 G 836 Porphyromonas 0.00 1 1 S 837 Porphyromonas gingivalis 0.00 2 0 F 171552 Prevotellaceae 0.00 1 0 G 838 Prevotella 0.00 1 1 S 2801997 Prevotella herbatica 0.00 1 0 G 2974251 Segatella 0.00 1 1 S 165179 Segatella copri 0.00 2 0 F 2005473 Muribaculaceae 0.00 2 0 G 2518495 Duncaniella 0.00 2 2 S 2518971 Duncaniella dubosii 0.00 2 0 F 2005523 Paludibacteraceae 0.00 2 0 G 346096 Paludibacter 0.00 2 0 S 185300 Paludibacter propionicigenes 0.00 2 2 S1 694427 Paludibacter propionicigenes WB4 0.01 6 0 O 1970189 Marinilabiliales 0.01 6 3 F 1471398 Prolixibacteraceae 0.00 2 0 G 2792393 Aquipluma 0.00 2 2 S 2010828 Aquipluma nitroreducens 0.00 1 0 G 1254401 Sunxiuqinia 0.00 1 0 G1 1573824 environmental samples 0.00 1 1 S 1573825 uncultured Sunxiuqinia sp. 0.01 5 0 C 1937959 Saprospiria 0.01 5 0 O 1936988 Saprospirales 0.01 5 0 F 1937961 Haliscomenobacteraceae 0.01 5 0 G 2349 Haliscomenobacter 0.01 5 0 S 2350 Haliscomenobacter hydrossis 0.01 5 5 S1 760192 Haliscomenobacter hydrossis DSM 1100 0.01 6 0 P 1090 Chlorobiota 0.01 6 0 C 191410 Chlorobiia 0.01 6 0 O 191411 Chlorobiales 0.01 6 0 F 191412 Chlorobiaceae 0.01 6 0 F1 274493 Chlorobium/Pelodictyon group 0.01 6 0 G 1099 Pelodictyon 0.01 6 0 S 34090 Pelodictyon phaeoclathratiforme 0.01 6 6 S1 324925 Pelodictyon phaeoclathratiforme BU-1 0.00 1 0 P 1134404 Ignavibacteriota 0.00 1 0 C 795747 Ignavibacteria 0.00 1 0 O 795748 Ignavibacteriales 0.00 1 0 F 795749 Ignavibacteriaceae 0.00 1 0 G 795750 Ignavibacterium 0.00 1 0 S 591197 Ignavibacterium album 0.00 1 1 S1 945713 Ignavibacterium album JCM 16511 0.01 7 0 P 142182 Gemmatimonadota 0.01 7 0 C 219685 Gemmatimonadia 0.01 7 0 O 219686 Gemmatimonadales 0.01 7 0 F 219687 Gemmatimonadaceae 0.01 5 3 G 173479 Gemmatimonas 0.00 1 0 S 173480 Gemmatimonas aurantiaca 0.00 1 1 S1 379066 Gemmatimonas aurantiaca T-27 0.00 1 1 S 1379270 Gemmatimonas phototrophica 0.00 2 0 G 1706036 Gemmatirosa 0.00 2 2 S 861299 Gemmatirosa kalamazoonensis 0.24 140 0 D1 1783257 PVC group 0.16 95 1 P 74201 Verrucomicrobiota 0.15 86 0 C 203494 Verrucomicrobiia 0.09 54 0 O 134621 Limisphaerales 0.09 54 0 F 3050006 Fontisphaeraceae 0.09 54 0 G 3050007 Fontisphaera 0.09 54 54 S 2974023 Fontisphaera persica 0.05 32 0 O 48461 Verrucomicrobiales 0.05 31 1 F 203557 Verrucomicrobiaceae 0.05 28 1 G 518753 Luteolibacter 0.04 22 0 G1 2637149 unclassified Luteolibacter 0.04 22 22 S 2995170 Luteolibacter sp. SL250 0.01 5 5 S 2728835 Luteolibacter luteus 0.00 2 0 G 2735 Verrucomicrobium 0.00 1 0 S 2736 Verrucomicrobium spinosum 0.00 1 1 S1 240016 Verrucomicrobium spinosum DSM 4136 = JCM 18804 0.00 1 0 G1 2625155 unclassified Verrucomicrobium 0.00 1 1 S 1882831 Verrucomicrobium sp. GAS474 0.00 1 0 F 1647988 Akkermansiaceae 0.00 1 1 G 239934 Akkermansia 0.01 7 0 C 414999 Opitutia 0.01 7 0 O 415000 Opitutales 0.01 7 6 F 134623 Opitutaceae 0.00 1 0 G 3126963 Termitidicoccus 0.00 1 1 S 1184151 Termitidicoccus mucosus 0.00 1 0 C 1955630 Methylacidiphilae 0.00 1 0 O 717963 Methylacidiphilales 0.00 1 0 F 717964 Methylacidiphilaceae 0.00 1 1 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.06 36 0 P 203682 Planctomycetota 0.06 35 0 C 203683 Planctomycetia 0.03 18 2 O 2691354 Pirellulales 0.03 15 0 F 2691357 Pirellulaceae 0.01 8 0 G 123 Pirellula 0.01 7 0 G1 2639138 unclassified Pirellula 0.01 7 7 S 1632865 Pirellula sp. SH-Sr6A 0.00 1 0 S 125 Pirellula staleyi 0.00 1 1 S1 530564 Pirellula staleyi DSM 6068 0.01 4 0 G 2795605 Aureliella 0.01 4 4 S 2527968 Aureliella helgolandensis 0.00 2 0 G 2795775 Lignipirellula 0.00 2 2 S 2528010 Lignipirellula cremea 0.00 1 1 G 2795779 Rosistilla 0.00 1 0 F 2691358 Thermoguttaceae 0.00 1 0 G 1676125 Thermogutta 0.00 1 1 S 1331910 Thermogutta terrifontis 0.01 8 0 O 2691355 Gemmatales 0.01 8 0 F 1914233 Gemmataceae 0.01 5 0 G 2807415 Urbifossiella 0.01 5 5 S 2528023 Urbifossiella limnaea 0.00 2 0 G 1382832 Telmatocola 0.00 2 2 S 1123043 Telmatocola sphagniphila 0.00 1 0 G 113 Gemmata 0.00 1 1 S 114 Gemmata obscuriglobus 0.01 5 0 O 112 Planctomycetales 0.01 5 0 F 126 Planctomycetaceae 0.00 2 1 G 1649480 Planctopirus 0.00 1 1 S 2528019 Planctopirus ephydatiae 0.00 1 0 G 118 Planctomyces 0.00 1 0 G1 2648843 unclassified Planctomyces 0.00 1 1 S 1632864 Planctomyces sp. SH-PL14 0.00 1 1 G 1649453 Gimesia 0.00 1 0 G 2795778 Caulifigura 0.00 1 1 S 2527983 Caulifigura coniformis 0.01 4 0 O 2691356 Isosphaerales 0.01 4 1 F 1763524 Isosphaeraceae 0.00 2 0 G 1511635 Aquisphaera 0.00 2 2 S 406548 Aquisphaera giovannonii 0.00 1 0 G 466152 Singulisphaera 0.00 1 0 S 466153 Singulisphaera acidiphila 0.00 1 1 S1 886293 Singulisphaera acidiphila DSM 18658 0.00 1 0 C 666505 Phycisphaerae 0.00 1 0 O 666506 Phycisphaerales 0.00 1 0 F 666507 Phycisphaeraceae 0.00 1 0 G 2803301 Poriferisphaera 0.00 1 1 S 2528020 Poriferisphaera corsica 0.01 6 0 P 204428 Chlamydiota 0.01 6 0 C 204429 Chlamydiia 0.01 6 0 O 1963360 Parachlamydiales 0.01 5 0 F 92713 Parachlamydiaceae 0.01 3 0 G 112987 Neochlamydia 0.01 3 0 G1 2643326 unclassified Neochlamydia 0.01 3 3 S 1353976 Neochlamydia sp. S13 0.00 1 0 G 83551 Parachlamydia 0.00 1 0 S 83552 Parachlamydia acanthamoebae 0.00 1 1 S1 765952 Parachlamydia acanthamoebae UV-7 0.00 1 0 G 282132 Candidatus Protochlamydia 0.00 1 1 S 389348 Candidatus Protochlamydia naegleriophila 0.00 1 0 F 689704 Candidatus Rhabdochlamydiaceae 0.00 1 1 G 292833 Candidatus Rhabdochlamydia 0.01 3 0 P 134625 Kiritimatiellota 0.00 2 0 C 2907184 Tichowtungiia 0.00 2 0 O 2907185 Tichowtungiales 0.00 2 0 F 2907186 Tichowtungiaceae 0.00 2 0 G 2907187 Tichowtungia 0.00 2 2 S 2697043 Tichowtungia aerotolerans 0.00 1 0 C 1921781 Kiritimatiellia 0.00 1 0 O 1921782 Kiritimatiellales 0.00 1 0 F 1921783 Kiritimatiellaceae 0.00 1 0 G 1921784 Kiritimatiella 0.00 1 1 S 1307763 Kiritimatiella glycovorans 0.05 28 0 P 508458 Synergistota 0.05 28 0 C 649775 Synergistia 0.05 28 0 O 649776 Synergistales 0.05 28 0 F 3029085 Aminithiophilaceae 0.05 28 0 G 3029078 Aminithiophilus 0.05 28 28 S 3029084 Aminithiophilus ramosus 0.05 27 0 P 200940 Thermodesulfobacteriota 0.02 11 0 C 3031651 Desulfuromonadia 0.01 7 0 O 3031668 Geobacterales 0.01 7 4 F 213422 Geobacteraceae 0.00 2 0 G 115782 Trichlorobacter 0.00 2 2 S 313985 Trichlorobacter lovleyi 0.00 1 0 G 2910589 Geotalea 0.00 1 0 S 351604 Geotalea uraniireducens 0.00 1 1 S1 351605 Geotalea uraniireducens Rf4 0.01 4 0 O 69541 Desulfuromonadales 0.00 2 0 F 213421 Desulfuromonadaceae 0.00 2 0 G 890 Desulfuromonas 0.00 2 2 S 1603606 Desulfuromonas soudanensis 0.00 2 0 F 3031659 Geopsychrobacteraceae 0.00 2 0 G 37817 Desulfuromusa 0.00 2 0 G1 97902 environmental samples 0.00 2 2 S 219183 uncultured Desulfuromusa sp. 0.01 5 0 C 3031449 Desulfovibrionia 0.01 5 0 O 213115 Desulfovibrionales 0.01 3 0 F 213116 Desulfomicrobiaceae 0.01 3 3 G 898 Desulfomicrobium 0.00 2 0 F 194924 Desulfovibrionaceae 0.00 1 0 G 2794998 Maridesulfovibrio 0.00 1 0 G1 2794999 unclassified Maridesulfovibrio 0.00 1 1 S 2795000 Maridesulfovibrio sp. 0.00 1 0 G 2910984 Solidesulfovibrio 0.00 1 0 S 345370 Solidesulfovibrio carbinoliphilus 0.00 1 1 S1 694327 Solidesulfovibrio carbinoliphilus subsp. oakridgensis 0.01 4 0 C 3031647 Desulfobaccia 0.01 4 0 O 3031655 Desulfobaccales 0.01 4 0 F 3031656 Desulfobaccaceae 0.01 4 0 G 60892 Desulfobacca 0.01 4 0 S 60893 Desulfobacca acetoxidans 0.01 4 4 S1 880072 Desulfobacca acetoxidans DSM 11109 0.01 3 0 C 3024408 Syntrophobacteria 0.01 3 0 O 213462 Syntrophobacterales 0.01 3 3 F 213465 Syntrophobacteraceae 0.00 1 0 C 67799 Thermodesulfobacteria 0.00 1 0 O 188710 Thermodesulfobacteriales 0.00 1 0 F 188711 Thermodesulfobacteriaceae 0.00 1 0 G 2033601 Thermosulfuriphilus 0.00 1 1 S 1936021 Thermosulfuriphilus ammonigenes 0.00 1 0 C 3024418 Desulfobacteria 0.00 1 0 O 213118 Desulfobacterales 0.00 1 0 F 2931039 Desulfococcaceae 0.00 1 0 G 45654 Desulfonema 0.00 1 1 S 45655 Desulfonema magnum 0.00 1 0 C 3031451 Desulfobulbia 0.00 1 0 O 3024411 Desulfobulbales 0.00 1 0 F 2886822 Desulfocapsaceae 0.00 1 0 G 53318 Desulfocapsa 0.00 1 0 S 65555 Desulfocapsa sulfexigens 0.00 1 1 S1 1167006 Desulfocapsa sulfexigens DSM 10523 0.00 1 0 C 3031646 Desulfarculia 0.00 1 0 O 453227 Desulfarculales 0.00 1 0 F 453228 Desulfarculaceae 0.00 1 0 G 3093638 Desulfoferula 0.00 1 1 S 3058419 Desulfoferula mesophila 0.03 20 0 P 40117 Nitrospirota 0.03 19 0 C 203693 Nitrospiria 0.03 19 0 O 189778 Nitrospirales 0.03 19 0 F 189779 Nitrospiraceae 0.03 19 2 G 1234 Nitrospira 0.02 14 14 S 2973512 Nitrospira tepida 0.00 2 2 S 1715989 Candidatus Nitrospira inopinata 0.00 1 1 S 42253 Nitrospira moscoviensis 0.00 1 0 C 2811502 Thermodesulfovibrionia 0.00 1 0 O 2811503 Thermodesulfovibrionales 0.00 1 0 F 2811505 Dissulfurispiraceae 0.00 1 0 G 2811506 Dissulfurispira 0.00 1 1 S 2715679 Dissulfurispira thermophila 0.02 13 0 D1 2323 Bacteria incertae sedis 0.02 13 0 D2 1783234 Bacteria candidate phyla 0.02 11 0 P 95818 Candidatus Saccharibacteria 0.01 7 0 C 2093818 Candidatus Saccharimonadia 0.01 5 0 O 2093825 Candidatus Saccharimonadales 0.01 5 0 F 2171986 Candidatus Saccharimonadaceae 0.01 5 0 G 1331051 Candidatus Saccharimonas 0.01 5 5 S 1332188 Candidatus Saccharimonas aalborgensis 0.00 2 0 O 2093819 Candidatus Nanosynbacterales 0.00 2 0 F 2093822 Candidatus Nanosynbacteraceae 0.00 2 2 G 2093823 Candidatus Nanosynbacter 0.01 4 0 G 2831665 Candidatus Mycosynbacter 0.01 4 4 S 2665156 Candidatus Mycosynbacter amalyticus 0.00 2 0 D3 95901 Candidatus Dependentiae 0.00 2 0 C 2497643 Candidatus Babeliae 0.00 2 0 O 2497644 Candidatus Babeliales 0.00 1 0 F 2497645 Candidatus Babeliaceae 0.00 1 0 G 1551504 Candidatus Babela 0.00 1 1 S 673862 Candidatus Babela massiliensis 0.00 1 0 F 2953756 Candidatus Chromulinivoraceae 0.00 1 0 G 2953757 Candidatus Chromulinivorax 0.00 1 1 S 2066483 Candidatus Chromulinivorax destructor 0.02 12 0 P 29547 Campylobacterota 0.02 12 0 C 3031852 Epsilonproteobacteria 0.02 12 0 O 213849 Campylobacterales 0.01 8 0 F 2808963 Arcobacteraceae 0.01 7 0 G 28196 Arcobacter 0.01 5 0 S 1278212 Arcobacter suis 0.01 5 5 S1 663365 Arcobacter suis CECT 7833 0.00 1 1 S 1315211 Arcobacter aquimarinus 0.00 1 1 S 1849015 Arcobacter acticola 0.00 1 1 G 2321111 Aliarcobacter 0.00 2 0 F 2932623 Sulfurospirillaceae 0.00 2 2 G 57665 Sulfurospirillum 0.00 1 0 F 72293 Helicobacteraceae 0.00 1 0 G 209 Helicobacter 0.00 1 1 S 210 Helicobacter pylori 0.00 1 0 F 72294 Campylobacteraceae 0.00 1 1 G 194 Campylobacter 0.01 7 0 P 2818505 Myxococcota 0.01 6 0 P1 3031711 Polyangia 0.01 4 0 O 3031712 Polyangiales 0.01 3 1 F 49 Polyangiaceae 0.00 1 0 G 55 Polyangium 0.00 1 1 S 2567896 Polyangium aurulentum 0.00 1 0 G 1882917 Pajaroellobacter 0.00 1 1 S 1882918 Pajaroellobacter abortibovis 0.00 1 0 F 1055686 Sandaracinaceae 0.00 1 0 G 1055688 Sandaracinus 0.00 1 1 S 927083 Sandaracinus amylolyticus 0.00 2 0 O 3031714 Haliangiales 0.00 2 0 F 224464 Kofleriaceae 0.00 2 0 G 162027 Haliangium 0.00 2 0 S 80816 Haliangium ochraceum 0.00 2 2 S1 502025 Haliangium ochraceum DSM 14365 0.00 1 0 C 32015 Myxococcia 0.00 1 0 O 29 Myxococcales 0.00 1 0 O1 80811 Cystobacterineae 0.00 1 0 F 39 Archangiaceae 0.00 1 0 G 42 Cystobacter 0.00 1 1 S 43 Cystobacter fuscus 0.01 5 0 P 203691 Spirochaetota 0.01 5 0 C 203692 Spirochaetia 0.01 4 0 O 1643688 Leptospirales 0.01 4 0 F 170 Leptospiraceae 0.01 3 0 G 338321 Turneriella 0.01 3 0 S 29510 Turneriella parva 0.01 3 3 S1 869212 Turneriella parva DSM 21527 0.00 1 1 G 171 Leptospira 0.00 1 0 O 136 Spirochaetales 0.00 1 0 F 2845253 Treponemataceae 0.00 1 1 G 157 Treponema 0.01 3 0 P 3018035 Bdellovibrionota 0.00 2 0 C 1553900 Oligoflexia 0.00 2 0 O 2024973 Silvanigrellales 0.00 2 1 F 2024974 Silvanigrellaceae 0.00 1 0 G 2838409 Pigmentibacter 0.00 1 0 G1 2838410 unclassified Pigmentibacter 0.00 1 1 S 2976982 Pigmentibacter sp. JX0631 0.00 1 0 C 3031418 Bdellovibrionia 0.00 1 0 O 213481 Bdellovibrionales 0.00 1 0 F 213483 Pseudobdellovibrionaceae 0.00 1 0 G 958 Bdellovibrio 0.00 1 0 G1 2633795 unclassified Bdellovibrio 0.00 1 1 S 2220073 Bdellovibrio sp. NC01 0.00 1 0 P 2138240 Coprothermobacterota 0.00 1 0 C 2138243 Coprothermobacteria 0.00 1 0 O 2138246 Coprothermobacterales 0.00 1 0 F 2138247 Coprothermobacteraceae 0.00 1 0 G 68335 Coprothermobacter 0.00 1 0 S 35786 Coprothermobacter proteolyticus 0.00 1 1 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 1 0 D 2157 Archaea 0.00 1 0 P 28890 Euryarchaeota 0.00 1 0 P1 2290931 Stenosarchaea group 0.00 1 0 C 183963 Halobacteria 0.00 1 0 O 2235 Halobacteriales 0.00 1 0 F 1644061 Natrialbaceae 0.00 1 0 G 29287 Natronococcus 0.00 1 0 S 29288 Natronococcus occultus 0.00 1 1 S1 694430 Natronococcus occultus SP4