0.02 10 10 U 0 unclassified 99.98 51793 0 R 1 root 99.98 51792 0 R1 131567 cellular organisms 99.98 51792 75 D 2 Bacteria 93.90 48645 83 P 1224 Pseudomonadota 47.69 24704 134 C 28211 Alphaproteobacteria 17.01 8811 376 O 204455 Rhodobacterales 15.32 7938 7029 F 31989 Paracoccaceae 0.39 203 47 G 265 Paracoccus 0.08 44 7 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.05 28 28 S 2760307 Paracoccus sp. MC1862 0.01 7 7 S 3030011 Paracoccus sp. S3-43 0.00 2 2 S 2589076 Paracoccus sp. AK26 0.08 43 43 S 659350 Paracoccus stylophorae 0.05 28 28 S 266 Paracoccus denitrificans 0.05 24 24 S 2259340 Paracoccus suum 0.02 10 10 S 1529068 Paracoccus tegillarcae 0.01 4 0 S 34003 Paracoccus aminophilus 0.01 4 4 S1 1367847 Paracoccus aminophilus JCM 7686 0.00 2 2 S 2065379 Paracoccus jeotgali 0.00 1 1 S 3017784 Paracoccus albus 0.39 202 0 G 2937410 Gymnodinialimonas 0.39 200 200 S 2856823 Gymnodinialimonas ceratoperidinii 0.00 2 0 G1 2937411 unclassified Gymnodinialimonas 0.00 2 2 S 3138498 Gymnodinialimonas sp. 57CJ19 0.21 111 0 G 1284657 Planktomarina 0.21 111 0 S 1284658 Planktomarina temperata 0.21 111 111 S1 666509 Planktomarina temperata RCA23 0.19 97 1 G 285107 Thioclava 0.19 96 96 S 1549850 Thioclava electrotropha 0.08 41 0 G 1209946 Roseicitreum 0.08 41 41 S 564137 Roseicitreum antarcticum 0.08 40 0 G 204456 Gemmobacter 0.04 23 23 S 2169400 Gemmobacter aquarius 0.03 17 17 S 2840474 Gemmobacter fulvus 0.06 29 0 G 3050722 Algicella 0.06 29 29 S 2683284 Algicella marina 0.05 25 0 G 2831955 Pikeienuella 0.05 25 25 S 2748098 Pikeienuella piscinae 0.04 19 4 G 121820 Roseinatronobacter 0.03 15 0 G1 2641430 unclassified Roseinatronobacter 0.03 15 15 S 3035471 Roseinatronobacter sp. S2 0.03 18 0 G 1060 Rhodobacter 0.03 13 13 S 1061 Rhodobacter capsulatus 0.01 4 0 G1 196779 unclassified Rhodobacter 0.01 4 4 S 2033869 Rhodobacter sp. CZR27 0.00 1 1 S 1850250 Rhodobacter xanthinilyticus 0.03 17 0 G 1955420 Silicimonas 0.03 17 17 S 1826607 Silicimonas algicola 0.03 15 0 G 34008 Rhodovulum 0.03 15 0 G1 2631432 unclassified Rhodovulum 0.03 15 15 S 1564506 Rhodovulum sp. P5 0.03 13 0 G 3029205 Abyssibius 0.03 13 13 S 2881234 Abyssibius alkaniclasticus 0.02 12 0 G 2818469 Fuscovulum 0.02 12 12 S 1075 Fuscovulum blasticum 0.02 11 0 G 1097466 Defluviimonas 0.02 11 0 G1 2632198 unclassified Defluviimonas 0.02 11 11 S 3121287 Defluviimonas sp. SAOS-178_SWC 0.02 11 0 G 2946607 Neotabrizicola 0.02 11 11 S 2807096 Neotabrizicola shimadae 0.02 8 0 G 2211635 Cognatishimia 0.02 8 8 S 1715691 Cognatishimia activa 0.01 7 0 G 1679449 Pseudooceanicola 0.01 7 7 S 1537215 Pseudooceanicola algae 0.01 7 3 G 2211641 Yoonia 0.01 4 0 G1 2629118 unclassified Yoonia 0.01 4 4 S 3137369 Yoonia sp. BS5-3 0.01 3 0 F1 3020825 Marivivens group 0.01 3 0 G 1759396 Marivivens 0.01 3 0 G1 2622455 unclassified Marivivens 0.01 3 3 S 3051171 Marivivens sp. LCG002 0.01 3 0 G 1775705 Frigidibacter 0.01 3 3 S 1335048 Frigidibacter mobilis 0.01 3 0 G 2944826 Pontibrevibacter 0.01 3 3 S 2758038 Pontibrevibacter nitratireducens 0.01 3 0 G 2211638 Limimaricola 0.01 3 3 S 1492771 Limimaricola variabilis 0.00 2 0 G 1844015 Pontivivens 0.00 2 2 S 2789856 Pontivivens ytuae 0.00 2 0 G 238783 Pseudorhodobacter 0.00 2 2 S 2500533 Pseudorhodobacter turbinis 0.00 2 0 G 2831925 Pukyongiella 0.00 2 2 S 2605946 Pukyongiella litopenaei 0.00 1 0 G 366614 Haematobacter 0.00 1 1 S 195105 Haematobacter massiliensis 0.00 1 0 G 1434002 Falsirhodobacter 0.00 1 1 S 2692330 Falsirhodobacter algicola 0.00 1 0 G 2683599 Paroceanicella 0.00 1 1 S 2579971 Paroceanicella profunda 0.00 1 0 G 2680018 Rhodophyticola 0.00 1 0 G1 2680031 unclassified Rhodophyticola 0.00 1 1 S 2916397 Rhodophyticola sp. CCM32 0.00 1 1 G 1653176 Cereibacter 0.96 497 37 F 2854170 Roseobacteraceae 0.52 269 0 G 266808 Thalassobacter 0.52 269 269 S 266809 Thalassobacter stenotrophicus 0.17 90 0 G 2919626 Alloyangia 0.17 90 90 S 311180 Alloyangia pacifica 0.10 51 1 G 74030 Roseovarius 0.09 49 0 G1 2614913 unclassified Roseovarius 0.09 49 49 S 2823043 Roseovarius sp. SCSIO 43702 0.00 1 1 S 337701 Roseovarius pacificus 0.03 14 0 G 97050 Ruegeria 0.03 13 13 S 89184 Ruegeria pomeroyi 0.00 1 0 G1 2625375 unclassified Ruegeria 0.00 1 1 S 2793010 Ruegeria sp. SCSIO 43209 0.02 12 1 G 60136 Sulfitobacter 0.02 9 0 G1 196795 unclassified Sulfitobacter 0.02 9 9 S 2070369 Sulfitobacter sp. JL08 0.00 1 1 S 60137 Sulfitobacter pontiacus 0.00 1 1 S 83219 Sulfitobacter mediterraneus 0.01 7 0 G 875170 Celeribacter 0.01 7 0 G1 1188777 environmental samples 0.01 7 7 S 1303376 uncultured Celeribacter sp. 0.01 4 0 G 336277 Roseicyclus 0.01 4 4 S 2161673 Roseicyclus marinus 0.01 4 0 G 191028 Leisingera 0.01 4 0 G1 2614906 unclassified Leisingera 0.01 4 4 S 2867013 Leisingera sp. M523 0.01 3 2 G 263377 Salipiger 0.00 1 0 G1 2640570 unclassified Salipiger 0.00 1 1 S 3029062 Salipiger sp. H15 0.00 2 0 G 53945 Octadecabacter 0.00 2 2 S 1458307 Octadecabacter temperatus 0.00 2 0 G 188905 Jannaschia 0.00 2 0 G1 2645469 unclassified Jannaschia 0.00 1 1 S 2867011 Jannaschia sp. M317 0.00 1 1 S 2867012 Jannaschia sp. W003 0.00 1 1 G 302485 Phaeobacter 0.00 1 0 G 315422 Palleronia 0.00 1 0 G1 2614920 unclassified Palleronia 0.00 1 1 S 3079304 Palleronia sp. LCG004 16.13 8356 6 O 204441 Rhodospirillales 15.91 8244 213 F 433 Acetobacteraceae 14.02 7263 7263 G 522 Acidiphilium 1.20 624 0 G 50709 Acidocella 1.20 624 0 G1 2648610 unclassified Acidocella 1.20 624 624 S 2697363 Acidocella sp. MX-AZ03 0.19 100 0 G 512381 Acidisoma 0.19 100 0 G1 2634065 unclassified Acidisoma 0.19 100 100 S 3040935 Acidisoma sp. PAMC 29798 0.04 23 4 G 125216 Roseomonas 0.03 17 17 S 1750527 Roseomonas fluvialis 0.00 2 2 S 2768162 Roseomonas haemaphysalidis 0.01 5 0 G 504465 Rhodovastum 0.01 5 5 S 504468 Rhodovastum atsumiense 0.01 4 0 G 2870717 Pseudoroseomonas 0.01 4 4 S 204525 Pseudoroseomonas cervicalis 0.01 3 0 G 1434011 Komagataeibacter 0.01 3 3 S 65958 Komagataeibacter oboediens 0.00 2 0 G 2870712 Pararoseomonas 0.00 2 0 G1 2870718 unclassified Pararoseomonas 0.00 2 2 S 3114537 Pararoseomonas sp. SCSIO 73927 0.00 2 0 G 153497 Kozakia 0.00 2 2 S 153496 Kozakia baliensis 0.00 2 0 G 364409 Granulibacter 0.00 2 2 S 364410 Granulibacter bethesdensis 0.00 1 0 G 434 Acetobacter 0.00 1 1 S 65959 Acetobacter pomorum 0.00 1 0 G 1079922 Commensalibacter 0.00 1 1 S 2070537 Commensalibacter melissae 0.00 1 0 G 35812 Roseococcus 0.00 1 1 S 2771361 Roseococcus microcysteis 0.08 41 0 F 2844866 Thalassospiraceae 0.08 41 11 G 168934 Thalassospira 0.03 17 0 G1 2648997 unclassified Thalassospira 0.03 16 16 S 2946605 Thalassospira sp. GO-4 0.00 1 1 S 2785908 Thalassospira sp. A40-3 0.03 13 13 S 2048283 Thalassospira marina 0.07 34 0 F 2829815 Azospirillaceae 0.06 31 29 G 191 Azospirillum 0.00 1 1 G1 2630922 unclassified Azospirillum 0.00 1 1 S 2970906 Azospirillum argentinense 0.01 3 0 G 1543705 Nitrospirillum 0.01 3 0 S 3144925 Nitrospirillum viridazoti 0.01 3 3 S1 1441467 Nitrospirillum viridazoti CBAmc 0.02 8 0 F 41295 Rhodospirillaceae 0.01 3 0 G 111830 Defluviicoccus 0.01 3 3 S 111831 Defluviicoccus vanus 0.00 2 0 G 1231242 Ferrovibrio 0.00 2 2 S 2594003 Ferrovibrio terrae 0.00 2 0 G 1263978 Candidatus Endolissoclinum 0.00 2 1 S 1263979 Candidatus Endolissoclinum faulkneri 0.00 1 1 S1 1193729 Candidatus Endolissoclinum faulkneri L2 0.00 1 0 G 1081 Rhodospirillum 0.00 1 1 S 1085 Rhodospirillum rubrum 0.01 5 0 F 2844601 Stellaceae 0.01 5 0 G 93 Stella 0.01 5 5 S 94 Stella humosa 0.01 5 0 F 3031143 Magnetovibrionaceae 0.01 5 0 G 1866954 Varunaivibrio 0.01 5 5 S 1773489 Varunaivibrio sulfuroxidans 0.01 5 0 F 3031144 Dongiaceae 0.01 5 1 G 2705399 Hypericibacter 0.01 3 3 S 2602015 Hypericibacter terrae 0.00 1 1 S 2602016 Hypericibacter adhaerens 0.01 4 0 F 2844864 Thalassobaculaceae 0.01 3 0 G 390876 Nisaea 0.01 3 3 S 1862145 Nisaea acidiphila 0.00 1 0 G 526215 Thalassobaculum 0.00 1 0 G1 2632499 unclassified Thalassobaculum 0.00 1 1 S 3100173 Thalassobaculum sp. OXR-137 0.00 1 0 F 597359 Kiloniellaceae 0.00 1 0 G 1647175 Aestuariispira 0.00 1 1 S 2775080 Aestuariispira ectoiniformans 0.00 1 0 F 2690195 Elioraeaceae 0.00 1 0 G 457933 Elioraea 0.00 1 1 S 2843330 Elioraea tepida 0.00 1 0 F 2813951 Terasakiellaceae 0.00 1 0 G 196080 Terasakiella 0.00 1 0 G1 2614952 unclassified Terasakiella 0.00 1 1 S 2560057 Terasakiella sp. SH-1 0.00 1 0 F 3031145 Novispirillaceae 0.00 1 0 G 1804663 Haematospirillum 0.00 1 1 S 1549855 Haematospirillum jordaniae 8.76 4536 288 O 356 Hyphomicrobiales 2.93 1518 1 F 2813035 Parvibaculaceae 2.91 1508 0 G 256616 Parvibaculum 2.91 1508 0 S 256618 Parvibaculum lavamentivorans 2.91 1508 1508 S1 402881 Parvibaculum lavamentivorans DS-1 0.01 5 0 G 444432 Anderseniella 0.01 5 0 G1 2614933 unclassified Anderseniella 0.01 5 5 S 1922226 Anderseniella sp. Alg231-50 0.01 3 0 G 2838250 Kaustia 0.01 3 3 S 2593653 Kaustia mangrovi 0.00 1 0 G 1541445 Candidatus Phaeomarinobacter 0.00 1 1 S 1458461 Candidatus Phaeomarinobacter ectocarpi 1.12 580 74 F 335928 Xanthobacteraceae 0.87 451 410 G 279 Xanthobacter 0.08 41 41 S 2528964 Xanthobacter dioxanivorans 0.04 19 0 G 99 Ancylobacter 0.03 18 18 S 223390 Ancylobacter polymorphus 0.00 1 1 S 1745854 Ancylobacter pratisalsi 0.03 18 8 G 556257 Pseudolabrys 0.02 8 8 S 331696 Pseudolabrys taiwanensis 0.00 2 0 G1 2638514 unclassified Pseudolabrys 0.00 2 2 S 2562284 Pseudolabrys sp. FHR47 0.02 10 0 G 6 Azorhizobium 0.02 10 0 S 7 Azorhizobium caulinodans 0.02 10 10 S1 438753 Azorhizobium caulinodans ORS 571 0.01 5 0 G 45402 Aquabacter 0.01 5 0 G1 2663263 unclassified Aquabacter 0.01 5 5 S 2820278 Aquabacter sp. L1I39 0.01 3 0 G 204476 Labrys 0.01 3 0 G1 2688601 unclassified Labrys (in: a-proteobacteria) 0.01 3 3 S 2789216 Labrys sp. KNU-23 1.12 580 0 F 255475 Aurantimonadaceae 0.96 498 495 G 414371 Aureimonas 0.01 3 3 S 370622 Aureimonas altamirensis 0.16 82 80 G 293088 Martelella 0.00 2 2 S 2583532 Martelella lutilitoris 0.86 448 16 F 82115 Rhizobiaceae 0.71 368 265 F1 227290 Rhizobium/Agrobacterium group 0.09 48 25 G 379 Rhizobium 0.02 11 0 S 56730 Rhizobium gallicum 0.02 11 0 S1 142627 Rhizobium gallicum bv. gallicum 0.02 11 11 S2 1041138 Rhizobium gallicum bv. gallicum R602sp 0.01 6 0 S 384 Rhizobium leguminosarum 0.01 6 6 S1 386 Rhizobium leguminosarum bv. trifolii 0.01 5 5 S 2081791 Rhizobium ruizarguesonis 0.00 1 1 S 348824 Rhizobium favelukesii 0.07 34 0 G 1612611 Pararhizobium 0.06 33 33 G1 2643050 unclassified Pararhizobium 0.00 1 1 S 3031126 Pararhizobium qamdonense 0.04 20 4 G 357 Agrobacterium 0.03 13 0 G1 1183400 Agrobacterium tumefaciens complex 0.03 13 13 S 358 Agrobacterium tumefaciens 0.00 2 2 S 1183413 Agrobacterium salinitolerans 0.00 1 1 S 160699 Agrobacterium larrymoorei 0.00 1 0 G 1525371 Neorhizobium 0.00 1 0 G1 2629175 unclassified Neorhizobium 0.00 1 1 S 2978974 Neorhizobium sp. CSC1952 0.05 26 1 F1 227292 Sinorhizobium/Ensifer group 0.05 25 14 G 28105 Sinorhizobium 0.01 7 4 S 382 Sinorhizobium meliloti 0.01 3 3 S1 1041157 Sinorhizobium meliloti WSM1022 0.01 4 0 G1 663276 Sinorhizobium fredii group 0.01 4 0 S 380 Sinorhizobium fredii 0.01 4 4 S1 394 Sinorhizobium fredii NGR234 0.03 18 14 G 323620 Shinella 0.01 4 4 G1 2643062 unclassified Shinella 0.03 15 6 G 34019 Liberibacter 0.01 4 0 S 309868 Candidatus Liberibacter americanus 0.01 4 4 S1 1261131 Candidatus Liberibacter americanus str. Sao Paulo 0.01 3 0 S 556287 Candidatus Liberibacter solanacearum 0.01 3 3 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.00 2 1 S 34021 Candidatus Liberibacter asiaticus 0.00 1 1 S1 1174529 Candidatus Liberibacter asiaticus str. gxpsy 0.01 3 0 G 2661800 Georhizobium 0.01 3 3 S 2341112 Georhizobium profundi 0.00 2 2 G 274591 Hoeflea 0.42 219 0 F 118882 Brucellaceae 0.42 218 186 F1 2826938 Brucella/Ochrobactrum group 0.06 32 10 G 234 Brucella 0.02 12 12 S 94625 Brucella intermedia 0.02 8 0 S 29459 Brucella melitensis 0.02 8 0 S1 645169 Brucella melitensis bv. 2 0.02 8 8 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.00 2 0 G1 2632610 unclassified Brucella 0.00 1 1 S 2986424 Brucella sp. MAB-22 0.00 1 1 S 2886044 Brucella sp. JSBI001 0.00 1 0 G 354349 Pseudochrobactrum 0.00 1 1 S 2834768 Pseudochrobactrum algeriensis 0.34 176 1 F 45401 Hyphomicrobiaceae 0.30 156 22 G 81 Hyphomicrobium 0.25 130 22 G1 2619925 unclassified Hyphomicrobium 0.13 65 65 S 2682968 Hyphomicrobium sp. ghe19 0.08 43 43 S 717785 Hyphomicrobium sp. MC1 0.01 4 2 S 53399 Hyphomicrobium denitrificans 0.00 2 2 S1 670307 Hyphomicrobium denitrificans 1NES1 0.02 10 0 G 29407 Rhodoplanes 0.02 10 0 G1 2619116 unclassified Rhodoplanes 0.02 10 10 S 674703 Rhodoplanes sp. Z2-YC6860 0.01 5 5 G 1484898 Methyloceanibacter 0.01 3 0 G 119044 Filomicrobium 0.01 3 3 S 1608628 Candidatus Filomicrobium marinum 0.00 1 0 G 1485594 Methyloligella 0.00 1 0 G1 2625955 unclassified Methyloligella 0.00 1 1 S 2742204 Methyloligella sp. GL2 0.34 176 13 F 2831106 Devosiaceae 0.25 132 8 G 46913 Devosia 0.24 122 24 G1 196773 unclassified Devosia 0.13 67 67 S 1736675 Devosia sp. A16 0.05 25 25 S 3049774 Devosia sp. RR2S18 0.01 4 4 S 2499144 Devosia sp. 1566 0.00 1 1 S 2759954 Devosia sp. MC521 0.00 1 1 S 2806348 Devosia sp. SL43 0.00 2 2 S 2774137 Devosia rhizoryzae 0.04 23 0 G 3064792 Mariluticola 0.04 23 23 S 2909283 Mariluticola halotolerans 0.02 8 1 G 1082930 Pelagibacterium 0.01 5 5 S 531813 Pelagibacterium halotolerans 0.00 2 2 G1 2623280 unclassified Pelagibacterium 0.31 162 9 F 69277 Phyllobacteriaceae 0.22 114 114 G 31988 Aminobacter 0.06 33 7 G 68287 Mesorhizobium 0.05 24 3 G1 325217 unclassified Mesorhizobium 0.03 17 17 S 2082387 Mesorhizobium sp. Pch-S 0.00 2 2 S 2493671 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 0.00 2 2 S 2584466 Mesorhizobium sp. 8 0.00 2 2 S 2725666 Mesorhizobium terrae 0.01 4 0 G 2911176 Aquibium 0.01 4 4 S 675281 Aquibium microcysteis 0.00 2 1 G 245876 Nitratireductor 0.00 1 1 S 2267699 Nitratireductor thuwali 0.19 101 29 F 41294 Nitrobacteraceae 0.10 51 50 G 1033 Afipia 0.00 1 1 S 40137 Afipia carboxidovorans 0.02 9 0 G 1073 Rhodopseudomonas 0.02 8 8 S 1076 Rhodopseudomonas palustris 0.00 1 0 G1 2638247 unclassified Rhodopseudomonas 0.00 1 1 S 2991972 Rhodopseudomonas sp. P2A-2r 0.01 7 5 G 374 Bradyrhizobium 0.00 1 1 S 1325095 Bradyrhizobium guangzhouense 0.00 1 1 S 2854389 Bradyrhizobium prioriisuperbiae 0.01 3 2 G 1395974 Tardiphaga 0.00 1 1 S 340268 Tardiphaga alba 0.00 2 0 G 1649510 Variibacter 0.00 2 2 S 1333996 Variibacter gotjawalensis 0.09 45 0 F 2831100 Boseaceae 0.09 45 44 G 85413 Bosea 0.00 1 1 G1 2653178 unclassified Bosea (in: a-proteobacteria) 0.08 43 0 F 2821832 Stappiaceae 0.07 36 1 G 150830 Roseibium 0.07 35 0 G1 1936170 environmental samples 0.07 35 35 S 1936171 uncultured Roseibium sp. 0.01 4 0 G 1406135 Breoghania 0.01 4 0 G1 2624130 unclassified Breoghania 0.01 3 3 S 2304600 Breoghania sp. L-A4 0.00 1 1 S 2065378 Breoghania sp. 0.00 2 2 G 152161 Stappia 0.00 1 1 G 258255 Pseudovibrio 0.07 35 0 O1 119042 Hyphomicrobiales incertae sedis 0.04 20 0 G 169055 Nordella 0.04 20 0 G1 2623691 unclassified Nordella 0.04 20 20 S 2712222 Nordella sp. HKS 07 0.01 6 0 G 212791 Enhydrobacter 0.01 6 0 G1 2632691 unclassified Enhydrobacter 0.01 6 6 S 1894999 Enhydrobacter sp. 0.01 5 0 G 376743 Candidatus Endowatersipora 0.01 5 0 G1 3077945 unclassified Candidatus Endowatersipora 0.01 5 5 S 3077946 Candidatus Endowatersipora endosymbiont of Watersipora subatra 0.01 3 0 G 1734920 Pseudorhodoplanes 0.01 3 3 S 1235591 Pseudorhodoplanes sinuspersici 0.00 1 0 G 2874214 Terrihabitans 0.00 1 1 S 708113 Terrihabitans soli 0.06 30 4 F 119045 Methylobacteriaceae 0.05 24 11 G 407 Methylobacterium 0.01 7 7 G1 2615210 unclassified Methylobacterium 0.01 5 5 S 270351 Methylobacterium aquaticum 0.00 1 1 S 269660 Methylobacterium brachiatum 0.00 2 2 G 186650 Microvirga 0.05 28 25 F 31993 Methylocystaceae 0.01 3 3 G 133 Methylocystis 0.05 25 4 F 45404 Beijerinckiaceae 0.01 7 0 G 532 Beijerinckia 0.01 7 0 S 533 Beijerinckia indica 0.01 7 0 S1 31994 Beijerinckia indica subsp. indica 0.01 7 7 S2 395963 Beijerinckia indica subsp. indica ATCC 9039 0.01 6 1 G 1156568 Methylovirgula 0.01 5 0 G1 2640612 unclassified Methylovirgula 0.01 5 5 S 2293567 Methylovirgula sp. 4M-Z18 0.01 5 0 G 184923 Methylocapsa 0.01 5 0 G1 2639413 unclassified Methylocapsa 0.01 5 5 S 3041435 Methylocapsa sp. D3K7 0.01 3 1 G 120652 Methylocella 0.00 2 2 S 227605 Methylocella tundrae 0.05 24 0 F 2829814 Ahrensiaceae 0.05 24 0 G 1594166 Oricola 0.05 24 24 S 2742145 Oricola thermophila 0.04 22 0 F 772 Bartonellaceae 0.04 22 12 G 773 Bartonella 0.02 9 3 G1 2645622 unclassified Bartonella 0.01 3 3 S 2759660 Bartonella sp. HY038 0.01 3 3 S 3057550 Bartonella sp. TP 0.00 1 1 S 803 Bartonella quintana 0.01 7 0 F 2831111 Kaistiaceae 0.01 7 0 G 166953 Kaistia 0.01 7 0 G1 2649303 unclassified Kaistia 0.01 7 7 S 2795690 Kaistia sp. 32K 0.01 6 0 F 3149308 Rhodoligotrophaceae 0.01 6 0 G 987053 Rhodoligotrophos 0.01 6 0 G1 2635862 unclassified Rhodoligotrophos 0.01 6 6 S 3069264 Rhodoligotrophos sp. CJ14 0.01 5 0 F 3149309 Methylopilaceae 0.01 5 0 G 2041902 Chenggangzhangella 0.01 5 5 S 1437009 Chenggangzhangella methanolivorans 0.01 5 0 F 2685818 Amorphaceae 0.01 5 0 G 1904377 Acuticoccus 0.01 5 4 G1 2631034 unclassified Acuticoccus 0.00 1 1 S 2928472 Acuticoccus sp. I52.16.1 0.01 4 0 F 2843308 Pleomorphomonadaceae 0.01 3 0 G 261933 Pleomorphomonas 0.01 3 0 G1 442120 environmental samples 0.01 3 3 S 442121 uncultured Pleomorphomonas sp. 0.00 1 0 G 1572860 Hartmannibacter 0.00 1 1 S 1482074 Hartmannibacter diazotrophicus 0.01 4 0 F 2036754 Chelatococcaceae 0.01 4 4 G 28209 Chelatococcus 0.01 3 0 F 2843305 Phreatobacteraceae 0.01 3 0 G 1632780 Phreatobacter 0.00 2 2 S 1868589 Phreatobacter cathodiphilus 0.00 1 1 S 1940610 Phreatobacter stygius 0.00 2 0 F 2831090 Blastochloridaceae 0.00 2 1 G 59282 Blastochloris 0.00 1 1 S 1079 Blastochloris viridis 5.12 2654 58 O 204457 Sphingomonadales 4.24 2199 240 F 335929 Erythrobacteraceae 3.63 1879 0 G 2676755 Croceibacterium 3.62 1876 1876 S 1267766 Croceibacterium atlanticum 0.00 2 2 S 3064139 Croceibacterium aestuarii 0.00 1 0 G1 2676756 unclassified Croceibacterium 0.00 1 1 S 3121290 Croceibacterium sp. TMG7-5b_MA50 0.06 32 8 F1 2800788 Erythrobacter/Porphyrobacter group 0.03 18 0 G 1111 Porphyrobacter 0.03 18 0 G1 2683265 unclassified Porphyrobacter 0.03 18 18 S 2003315 Porphyrobacter sp. CACIAM 03H1 0.01 6 2 G 1041 Erythrobacter 0.01 4 2 G1 2633097 unclassified Erythrobacter 0.00 2 2 S 1042 Erythrobacter sp. 0.03 14 0 G 1295327 Croceicoccus 0.02 11 11 S 450378 Croceicoccus marinus 0.01 3 0 G1 2629967 unclassified Croceicoccus 0.01 3 3 S 1703338 Croceicoccus sp. Ery15 0.02 12 0 G 2800680 Alteriqipengyuania 0.02 12 12 S 3053610 Alteriqipengyuania flavescens 0.01 7 0 G 2800686 Tsuneonella 0.01 4 4 S 2338327 Tsuneonella amylolytica 0.01 3 0 G1 2800703 unclassified Tsuneonella 0.01 3 3 S 3042152 Tsuneonella sp. CC-YZS046 0.01 6 3 G 2800681 Aurantiacibacter 0.01 3 0 G1 2800693 unclassified Aurantiacibacter 0.01 3 3 S 3009083 Aurantiacibacter sp. MUD61 0.01 5 0 G 2800682 Paraurantiacibacter 0.01 5 5 S 645517 Paraurantiacibacter namhicola 0.01 3 0 G 361177 Altererythrobacter 0.01 3 0 G1 2614945 unclassified Altererythrobacter 0.00 2 2 S 2060312 Altererythrobacter sp. B11 0.00 1 1 S 2185142 Altererythrobacter sp. ZODW24 0.00 1 0 G 2827482 Caenibius 0.00 1 0 S 169176 Caenibius tardaugens 0.00 1 1 S1 1219035 Caenibius tardaugens NBRC 16725 0.75 387 168 F 41297 Sphingomonadaceae 0.22 112 71 G 13687 Sphingomonas 0.02 8 0 G1 196159 unclassified Sphingomonas 0.01 5 5 S 2937787 Sphingomonas sp. SUN039 0.00 1 1 S 3114300 Sphingomonas sp. M1-B02 0.00 1 1 S 2735134 Sphingomonas sp. AP4-R1 0.00 1 1 S 2653203 Sphingomonas sp. CL5.1 0.01 6 6 S 2071607 Sphingomonas rhizophila 0.01 5 5 S 386874 Sphingomonas sediminicola 0.01 4 4 S 2872652 Sphingomonas nostoxanthinifaciens 0.01 3 3 S 2594473 Sphingomonas xanthus 0.01 3 3 S 2681549 Sphingomonas profundi 0.01 3 3 S 1541170 Sphingomonas morindae 0.00 2 2 S 13689 Sphingomonas paucimobilis 0.00 2 2 S 2714943 Sphingomonas piscis 0.00 2 2 S 2714944 Sphingomonas sinipercae 0.00 1 1 S 298708 Sphingomonas kaistensis 0.00 1 1 S 1609977 Sphingomonas hengshuiensis 0.00 1 1 S 1813468 Sphingomonas naphthae 0.10 53 23 G 165696 Novosphingobium 0.04 23 12 G1 2644732 unclassified Novosphingobium 0.01 7 7 S 3079861 Novosphingobium sp. ZN18A2 0.01 4 4 S 2675225 Novosphingobium sp. Gsoil 351 0.01 4 4 S 158500 Novosphingobium resinovorum 0.00 2 2 S 2728851 Novosphingobium olei 0.00 1 0 S 48935 Novosphingobium aromaticivorans 0.00 1 1 S1 279238 Novosphingobium aromaticivorans DSM 12444 0.03 14 0 G 1434046 Sphingorhabdus 0.02 8 8 S 392610 Sphingorhabdus lacus 0.01 6 6 S 1913578 Sphingorhabdus lutea 0.02 9 0 G 2676781 Aquisediminimonas 0.02 9 9 S 1550733 Aquisediminimonas profunda 0.02 8 7 G 165697 Sphingopyxis 0.00 1 0 G1 2614943 unclassified Sphingopyxis 0.00 1 1 S 2482763 Sphingopyxis sp. YF1 0.02 8 8 G 1227948 Sphingomicrobium 0.01 6 3 G 165695 Sphingobium 0.01 3 0 G1 2611147 unclassified Sphingobium 0.01 3 3 S 627192 Sphingobium sp. SYK-6 0.01 5 0 G 1763827 Hankyongella 0.01 5 5 S 1763828 Hankyongella ginsenosidimutans 0.01 3 0 G 2709685 Parasphingorhabdus 0.01 3 0 G1 2709687 unclassified Parasphingorhabdus 0.01 3 3 S 3071408 Parasphingorhabdus sp. SCSIO 66989 0.00 1 0 G 1234545 Parasphingopyxis 0.00 1 0 G1 2621071 unclassified Parasphingopyxis 0.00 1 1 S 2724527 Parasphingopyxis sp. CP4 0.02 10 0 F 2820280 Sphingosinicellaceae 0.01 6 0 G 335405 Sphingosinicella 0.01 6 6 S 335406 Sphingosinicella microcystinivorans 0.00 2 2 G 1508451 Polymorphobacter 0.00 2 0 G 2883109 Sandaracinobacteroides 0.00 2 2 S 2759707 Sandaracinobacteroides saxicola 0.15 80 2 O 766 Rickettsiales 0.12 64 1 F 775 Rickettsiaceae 0.11 58 5 F1 33988 Rickettsieae 0.09 47 0 G 780 Rickettsia 0.09 45 0 G1 114277 spotted fever group 0.09 45 0 G2 266068 Rickettsia sibirica subgroup 0.09 45 0 S 35793 Rickettsia sibirica 0.09 45 45 S1 272951 Rickettsia sibirica 246 0.00 2 0 G1 114295 unclassified Rickettsia 0.00 1 1 S 3066251 Rickettsia endosymbiont of Polydrusus tereticollis 0.00 1 1 S 3066270 Rickettsia endosymbiont of Seladonia tumulorum 0.00 2 0 G 2601645 Candidatus Sneabacter 0.00 2 2 S 2601646 Candidatus Sneabacter namystus 0.00 2 0 G 2996317 Candidatus Tisiphia 0.00 2 0 G1 2996318 unclassified Candidatus Tisiphia 0.00 2 2 S 3066262 Candidatus Tisiphia endosymbiont of Beris chalybata 0.00 1 0 G 69474 Orientia 0.00 1 1 S 784 Orientia tsutsugamushi 0.00 1 0 G 1522201 Candidatus Trichorickettsia 0.00 1 1 S 1346319 Candidatus Trichorickettsia mobilis 0.01 5 0 G 1742636 Candidatus Megaera 0.01 5 5 S 988779 Candidatus Megaera polyxenophila 0.02 10 3 F 942 Anaplasmataceae 0.01 3 0 F1 952 Wolbachieae 0.01 3 0 G 953 Wolbachia 0.01 3 1 G1 2640676 unclassified Wolbachia 0.00 1 1 S 3066194 Wolbachia endosymbiont (group A) of Anthophora plumipes 0.00 1 1 S 2953990 Wolbachia endosymbiont (group B) of Campaea margaritaria 0.00 2 1 G 33993 Neorickettsia 0.00 1 0 S 33994 Neorickettsia helminthoeca 0.00 1 1 S1 1286528 Neorickettsia helminthoeca str. Oregon 0.00 1 0 G 943 Ehrlichia 0.00 1 0 G1 106178 canis group 0.00 1 1 S 779 Ehrlichia ruminantium 0.00 1 0 G 2883098 Candidatus Mesenet 0.00 1 0 G1 3066220 unclassified Candidatus Mesenet 0.00 1 1 S 3077948 Candidatus Mesenet endosymbiont of Agriotes lineatus 0.01 4 1 F 1328881 Candidatus Midichloriaceae 0.01 3 0 G 411566 Candidatus Midichloria 0.01 3 0 S 234827 Candidatus Midichloria mitochondrii 0.01 3 3 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.11 56 0 O 204458 Caulobacterales 0.11 56 16 F 76892 Caulobacteraceae 0.03 14 1 G 20 Phenylobacterium 0.02 9 0 G1 2640670 unclassified Phenylobacterium 0.01 6 6 S 2903901 Phenylobacterium sp. LH3H17 0.01 3 3 S 3015177 Phenylobacterium sp. NIBR 498073 0.00 2 2 S 2201350 Phenylobacterium parvum 0.00 1 0 S 284016 Phenylobacterium zucineum 0.00 1 1 S1 450851 Phenylobacterium zucineum HLK1 0.00 1 1 S 2823693 Phenylobacterium montanum 0.02 9 5 G 41275 Brevundimonas 0.00 2 2 S 172043 Brevundimonas nasdae 0.00 1 1 S 588932 Brevundimonas naejangsanensis 0.00 1 1 S 657642 Brevundimonas olei 0.02 9 1 G 76890 Asticcacaulis 0.02 8 8 G1 2628350 unclassified Asticcacaulis 0.01 6 2 G 75 Caulobacter 0.01 3 3 S 69666 Caulobacter mirabilis 0.00 1 0 G1 2648921 unclassified Caulobacter 0.00 1 1 S 3016000 Caulobacter sp. NIBR1757 0.00 2 0 G 2768684 Terricaulis 0.00 2 2 S 2686094 Terricaulis silvestris 0.04 20 0 O 1921002 Holosporales 0.03 15 0 F 1777752 Candidatus Paracaedibacteraceae 0.02 12 0 G 1521255 Candidatus Paracaedibacter 0.02 12 12 S 91604 Candidatus Paracaedibacter acanthamoebae 0.01 3 0 G 3163645 Candidatus Bodocaedibacter 0.01 3 3 S 2741701 Candidatus Bodocaedibacter vickermanii 0.01 3 0 F 2100208 Caedimonadaceae 0.01 3 0 G 1509243 Candidatus Nucleicultrix 0.01 3 0 S 1509244 Candidatus Nucleicultrix amoebiphila 0.01 3 3 S1 1414854 Candidatus Nucleicultrix amoebiphila FS5 0.00 2 0 F 44746 Holosporaceae 0.00 2 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 2 2 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.03 16 0 O 2800059 Maricaulales 0.03 16 3 F 2800061 Maricaulaceae 0.03 13 0 G 74317 Maricaulis 0.03 13 13 S 74318 Maricaulis maris 0.02 12 2 O 362534 Kordiimonadales 0.01 7 0 F 1331809 Kordiimonadaceae 0.01 7 1 G 288021 Kordiimonas 0.01 5 0 G1 2618732 unclassified Kordiimonas 0.01 5 5 S 2829597 Kordiimonas sp. SCSIO 12610 0.00 1 1 S 2161677 Kordiimonas pumila 0.01 3 0 F 1549128 Temperatibacteraceae 0.01 3 0 G 1549129 Temperatibacter 0.01 3 3 S 1456591 Temperatibacter marinus 0.02 9 0 O 255473 Parvularculales 0.02 9 1 F 255474 Parvularculaceae 0.01 6 0 G 1795639 Aquisalinus 0.01 6 6 S 1526572 Aquisalinus flavus 0.00 2 0 G 208215 Parvularcula 0.00 2 0 G1 2647080 unclassified Parvularcula 0.00 2 2 S 3078805 Parvularcula sp. LCG005 0.01 5 0 O 2800060 Hyphomonadales 0.01 5 0 F 69657 Hyphomonadaceae 0.00 2 2 G 85 Hyphomonas 0.00 2 0 G 2723 Hirschia 0.00 2 0 S 2724 Hirschia baltica 0.00 2 2 S1 582402 Hirschia baltica ATCC 49814 0.00 1 0 G 2892997 Candidatus Viadribacter 0.00 1 1 S 1759059 Candidatus Viadribacter manganicus 0.01 4 3 O 54526 Candidatus Pelagibacterales 0.00 1 0 F 1655514 Candidatus Pelagibacteraceae 0.00 1 1 G 198251 Candidatus Pelagibacter 0.01 4 0 O 2066490 Emcibacterales 0.01 4 0 F 2066491 Emcibacteraceae 0.01 3 0 G 2943291 Pseudemcibacter 0.01 3 3 S 2857064 Pseudemcibacter aquimaris 0.00 1 0 G 2813803 Luteithermobacter 0.00 1 1 S 2582913 Luteithermobacter gelatinilyticus 0.01 3 0 O 3108222 Geminicoccales 0.01 3 0 F 2066434 Geminicoccaceae 0.01 3 0 G 171436 Tistrella 0.01 3 0 S 171437 Tistrella mobilis 0.01 3 3 S1 1110502 Tistrella mobilis KA081020-065 0.00 2 0 O 510684 Sneathiellales 0.00 2 0 F 510685 Sneathiellaceae 0.00 2 0 G 510690 Sneathiella 0.00 2 2 S 2950108 Sneathiella marina 0.00 1 0 O 1191478 Magnetococcales 0.00 1 0 F 1191479 Magnetococcaceae 0.00 1 0 G 162171 Magnetococcus 0.00 1 0 S 1124597 Magnetococcus marinus 0.00 1 1 S1 156889 Magnetococcus marinus MC-1 0.00 1 0 O 2493627 Minwuiales 0.00 1 0 F 2493628 Minwuiaceae 0.00 1 0 G 2493629 Minwuia 0.00 1 1 G1 2618799 unclassified Minwuia 41.38 21434 177 C 1236 Gammaproteobacteria 35.59 18439 14 O 135614 Lysobacterales 35.17 18217 294 F 1775411 Rhodanobacteraceae 22.84 11833 1652 G 231454 Dyella 19.64 10176 24 G1 2634549 unclassified Dyella 14.09 7299 7299 S 3075430 Dyella sp. BiH032 5.43 2813 2813 S 3069105 Dyella sp. A6 0.08 40 40 S 2501295 Dyella sp. M7H15-1 0.01 4 4 S 445710 Dyella thiooxydans 0.00 1 1 S 1849581 Dyella caseinilytica 10.11 5235 497 G 242605 Luteibacter 8.70 4508 4508 S 2911537 Luteibacter aegosomatis 0.36 187 187 S 2911539 Luteibacter aegosomatissinici 0.07 35 35 S 2911538 Luteibacter aegosomaticola 0.01 5 5 S 564369 Luteibacter anthropi 0.01 3 3 S 2589080 Luteibacter pinisoli 1.05 543 5 G 75309 Rhodanobacter 1.00 518 16 G1 2621553 unclassified Rhodanobacter 0.97 502 502 S 3031330 Rhodanobacter sp. AS-Z3 0.03 18 18 S 582702 Rhodanobacter glycinis 0.00 2 2 S 666685 Rhodanobacter denitrificans 0.57 295 0 G 70411 Frateuria 0.54 279 279 S 1542730 Frateuria soli 0.03 15 15 S 2898793 Frateuria edaphi 0.00 1 0 S 81475 Frateuria aurantia 0.00 1 1 S1 767434 Frateuria aurantia DSM 6220 0.02 9 0 G 323413 Dokdonella 0.02 9 0 S 323415 Dokdonella koreensis 0.02 9 9 S1 1300342 Dokdonella koreensis DS-123 0.01 4 0 G 2707020 Aerosticca 0.01 4 4 S 2010829 Aerosticca soli 0.01 3 0 G 2233801 Ahniella 0.01 3 3 S 2021234 Ahniella affigens 0.00 1 0 G 1453544 Tahibacter 0.00 1 1 S 2976241 Tahibacter amnicola 0.40 208 36 F 32033 Lysobacteraceae 0.17 89 20 G 40323 Stenotrophomonas 0.13 68 68 S 128780 Stenotrophomonas acidaminiphila 0.00 1 1 S 216778 Stenotrophomonas rhizophila 0.05 26 12 G 68 Lysobacter 0.01 4 4 S 435897 Lysobacter capsici 0.01 3 3 S 2822368 Lysobacter luteus 0.00 2 2 S 84531 Lysobacter antibioticus 0.00 2 0 G1 2635362 unclassified Lysobacter 0.00 1 1 S 2290922 Lysobacter sp. TY2-98 0.00 1 1 S 2762611 Lysobacter sp. CW239 0.00 1 1 S 2865112 Lysobacter terrestris 0.00 1 1 S 1003114 Lysobacter yananisis 0.00 1 1 S 2698682 Lysobacter oculi 0.03 16 0 G 490567 Arenimonas 0.03 16 16 S 370777 Arenimonas daejeonensis 0.02 12 11 G 83618 Pseudoxanthomonas 0.00 1 1 S 266062 Pseudoxanthomonas daejeonensis 0.02 9 1 G 338 Xanthomonas 0.02 8 8 S 29447 Xanthomonas albilineans 0.01 7 2 G 2370 Xylella 0.01 5 5 S 2371 Xylella fastidiosa 0.01 6 0 G 141948 Thermomonas 0.01 3 0 G1 2633315 unclassified Thermomonas 0.00 2 2 S 2714945 Thermomonas sp. HDW16 0.00 1 1 S 2771436 Thermomonas sp. XSG 0.00 2 2 S 2202149 Thermomonas aquatica 0.00 1 1 S 2884874 Thermomonas paludicola 0.01 5 1 G 83614 Luteimonas 0.01 3 1 G1 2629088 unclassified Luteimonas 0.00 2 2 S 1896164 Luteimonas sp. JM171 0.00 1 1 S 1176533 Luteimonas granuli 0.00 2 0 G 2709666 Pseudolysobacter 0.00 2 2 S 2511995 Pseudolysobacter antarcticus 2.37 1228 3 O 135619 Oceanospirillales 2.32 1200 14 F 224372 Alcanivoracaceae 2.20 1138 1135 G 3020832 Alloalcanivorax 0.01 3 3 S 1094342 Alloalcanivorax xenomutans 0.05 26 0 G 3020833 Isoalcanivorax 0.05 26 0 S 1306787 Isoalcanivorax pacificus 0.05 26 26 S1 391936 Isoalcanivorax pacificus W11-5 0.04 22 1 G 59753 Alcanivorax 0.04 21 0 G1 2638842 unclassified Alcanivorax 0.04 21 21 S 1872427 Alcanivorax sp. 0.04 19 13 F 28256 Halomonadaceae 0.01 5 0 F1 114403 Zymobacter group 0.01 3 0 G 114185 Candidatus Carsonella 0.01 3 3 S 114186 Candidatus Carsonella ruddii 0.00 2 0 G 235572 Candidatus Portiera 0.00 2 2 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 42054 Chromohalobacter 0.00 1 0 S 158080 Chromohalobacter salexigens 0.00 1 1 S1 290398 Chromohalobacter salexigens DSM 3043 0.01 3 0 F 135620 Oceanospirillaceae 0.00 1 1 G 187492 Thalassolituus 0.00 1 0 G 267849 Nitrincola 0.00 1 1 S 2614693 Nitrincola iocasae 0.00 1 0 G 459520 Neptuniibacter 0.00 1 1 S 651666 Neptuniibacter halophilus 0.00 2 0 F 224379 Hahellaceae 0.00 2 2 G 158481 Hahella 0.00 1 0 F 191033 Oleiphilaceae 0.00 1 0 G 141450 Oleiphilus 0.00 1 1 S 141451 Oleiphilus messinensis 1.56 810 0 O 72274 Pseudomonadales 1.24 644 0 F 2887365 Marinobacteraceae 1.24 644 626 G 2742 Marinobacter 0.02 12 8 G1 83889 unclassified Marinobacter 0.01 4 4 S 3035454 Marinobacter sp. LA51 0.01 5 5 S 2603215 Marinobacter fonticola 0.00 1 0 S 2743 Marinobacter nauticus 0.00 1 1 S1 351348 Marinobacter nauticus VT8 0.32 164 44 F 135621 Pseudomonadaceae 0.16 84 33 G 286 Pseudomonas 0.04 20 2 G1 136841 Pseudomonas aeruginosa group 0.03 18 18 S 287 Pseudomonas aeruginosa 0.02 11 4 G1 196821 unclassified Pseudomonas 0.00 2 2 S 3035289 Pseudomonas sp. NyZ480 0.00 1 1 S 2762896 Pseudomonas sp. MPDS 0.00 1 1 S 2705472 Pseudomonas sp. MTM4 0.00 1 1 S 2954078 Pseudomonas sp. FP1740 0.00 1 1 S 1649877 Pseudomonas sp. CCOS 191 0.00 1 1 S 1207075 Pseudomonas sp. UW4 0.01 7 0 G1 136845 Pseudomonas putida group 0.01 5 3 S 303 Pseudomonas putida 0.00 2 2 S1 1196325 Pseudomonas putida DOT-T1E 0.00 2 2 S 78327 Pseudomonas mosselii 0.01 5 0 G1 136849 Pseudomonas syringae group 0.01 4 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.01 4 1 S 317 Pseudomonas syringae 0.00 1 0 S1 59510 Pseudomonas syringae pv. pisi 0.00 1 1 S2 1357292 Pseudomonas syringae pv. pisi str. PP1 0.00 1 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.00 1 1 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 1 1 S1 1357285 Pseudomonas syringae CC457 0.00 1 0 G2 251698 Pseudomonas syringae group genomosp. 2 0.00 1 1 S 29438 Pseudomonas savastanoi 0.00 2 2 S 2219225 Pseudomonas asiatica 0.00 2 0 G1 136843 Pseudomonas fluorescens group 0.00 1 1 S 47878 Pseudomonas azotoformans 0.00 1 0 S 47883 Pseudomonas synxantha 0.00 1 1 S1 96901 Pseudomonas synxantha BG33R 0.00 1 1 S 2316085 Pseudomonas bubulae 0.00 1 1 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 1 1 S 158627 Pseudomonas graminis 0.00 1 1 S 364197 Pseudomonas pohangensis 0.04 20 0 G 2901164 Stutzerimonas 0.04 20 0 G1 136846 Stutzerimonas stutzeri group 0.03 15 15 S 74829 Stutzerimonas balearica 0.01 5 0 G2 578833 Stutzerimonas stutzeri subgroup 0.01 5 5 S 316 Stutzerimonas stutzeri 0.03 13 3 G 2901189 Halopseudomonas 0.02 9 9 S 1708783 Halopseudomonas oceani 0.00 1 1 S 487184 Halopseudomonas xinjiangensis 0.01 3 0 G 1654787 Thiopseudomonas 0.01 3 3 S 1697053 Thiopseudomonas alkaliphila 0.00 1 0 F 3085095 Pseudohongiellaceae 0.00 1 0 G 1524249 Pseudohongiella 0.00 1 1 S 1249552 Pseudohongiella spirulinae 0.00 1 0 F 3085096 Ketobacteraceae 0.00 1 0 G 2025617 Ketobacter 0.00 1 1 S 1917421 Ketobacter alkanivorans 0.74 381 8 O 91347 Enterobacterales 0.64 330 40 F 543 Enterobacteriaceae 0.19 96 0 G 561 Escherichia 0.18 95 87 S 562 Escherichia coli 0.01 3 3 S1 362663 Escherichia coli 536 0.00 2 1 S1 83334 Escherichia coli O157:H7 0.00 1 1 S2 502346 Escherichia coli O157:H7 str. TW14588 0.00 2 2 S1 244320 Escherichia coli O55:H7 0.00 1 1 S1 331112 Escherichia coli HS 0.00 1 1 S 564 Escherichia fergusonii 0.16 81 0 F1 2890311 Klebsiella/Raoultella group 0.16 81 1 G 570 Klebsiella 0.14 74 73 S 573 Klebsiella pneumoniae 0.00 1 1 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.01 4 4 S 548 Klebsiella aerogenes 0.00 2 1 S 1463165 Klebsiella quasipneumoniae 0.00 1 1 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.09 49 1 G 590 Salmonella 0.09 47 4 S 28901 Salmonella enterica 0.08 43 6 S1 59201 Salmonella enterica subsp. enterica 0.02 11 11 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.01 7 7 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.01 7 7 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.01 4 4 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 2 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.00 2 2 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.00 1 0 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.00 1 1 S3 858307 Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 0.00 1 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 1 1 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 1 1 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 1 1 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.00 1 0 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 1 1 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.00 1 1 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.00 1 0 S 54736 Salmonella bongori 0.00 1 1 S1 1299282 Salmonella bongori CFSAN000510 0.05 24 0 G 547 Enterobacter 0.04 23 0 G1 354276 Enterobacter cloacae complex 0.03 15 15 S 299767 Enterobacter ludwigii 0.01 4 3 S 158836 Enterobacter hormaechei 0.00 1 1 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.00 2 1 S 550 Enterobacter cloacae 0.00 1 1 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 2 2 S 61645 Enterobacter asburiae 0.00 1 1 S 885040 Enterobacter soli 0.04 20 0 F1 191675 Enterobacteriaceae incertae sedis 0.04 20 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.03 16 0 G 472825 Candidatus Purcelliella 0.03 16 16 S 472834 Candidatus Purcelliella pentastirinorum 0.00 2 0 F3 84564 ant endosymbionts 0.00 2 0 G 203804 Candidatus Blochmanniella 0.00 2 0 G1 711328 unclassified Candidatus Blochmanniella 0.00 1 1 S 1505597 Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus 0.00 1 1 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.00 1 0 F3 146507 aphid secondary symbionts 0.00 1 1 G 568987 Candidatus Hamiltonella 0.00 1 0 G 1302410 Candidatus Annandia 0.00 1 1 S 1302411 Candidatus Annandia adelgestsuga 0.02 10 0 F1 36866 unclassified Enterobacteriaceae 0.01 6 6 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.01 4 4 S 2675793 Enterobacteriaceae endosymbiont of Plateumaris braccata 0.00 2 0 G 1048757 Candidatus Moranella 0.00 2 2 S 1048758 Candidatus Moranella endobia 0.00 2 0 G 544 Citrobacter 0.00 1 0 G1 1344959 Citrobacter freundii complex 0.00 1 1 S 67828 Citrobacter gillenii 0.00 1 1 S 2971264 Citrobacter enshiensis 0.00 2 0 G 620 Shigella 0.00 2 2 S 623 Shigella flexneri 0.00 1 0 G 1177214 Candidatus Profftia 0.00 1 1 S 1987921 Candidatus Profftia lariciata 0.00 1 0 G 1649298 Siccibacter 0.00 1 1 S 1505757 Siccibacter colletis 0.00 1 0 G 1330545 Lelliottia 0.00 1 1 S 61646 Lelliottia amnigena 0.00 1 0 G 409304 Candidatus Ishikawella 0.00 1 0 S 168169 Candidatus Ishikawella capsulata 0.00 1 1 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.03 13 0 F 2812006 Bruguierivoracaceae 0.03 13 0 G 84565 Sodalis 0.02 10 10 S 2697027 Sodalis ligni 0.01 3 0 S 1486991 Candidatus Sodalis pierantonius 0.01 3 3 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.02 11 1 F 1903411 Yersiniaceae 0.01 6 0 G 613 Serratia 0.01 3 3 S 61652 Serratia rubidaea 0.00 2 0 S 82996 Serratia plymuthica 0.00 2 2 S1 1006598 Serratia plymuthica RVH1 0.00 1 1 S 138074 Serratia symbiotica 0.01 4 0 G 629 Yersinia 0.01 4 0 G1 1649845 Yersinia pseudotuberculosis complex 0.01 3 0 S 632 Yersinia pestis 0.00 2 2 S1 360102 Yersinia pestis Antiqua 0.00 1 1 S1 1345701 Yersinia pestis 790 0.00 1 1 S 633 Yersinia pseudotuberculosis 0.02 8 0 F 1903409 Erwiniaceae 0.01 7 0 G 551 Erwinia 0.01 6 0 G1 2622719 unclassified Erwinia 0.01 6 6 S 215689 Erwinia sp. Ejp617 0.00 1 1 S 1922217 Candidatus Erwinia haradaeae 0.00 1 0 G 32199 Buchnera 0.00 1 0 S 9 Buchnera aphidicola 0.00 1 1 S1 1965431 Buchnera aphidicola (Ceratoglyphina bambusae) 0.01 5 1 F 1903414 Morganellaceae 0.00 2 0 G 626 Xenorhabdus 0.00 1 1 S 628 Xenorhabdus nematophila 0.00 1 0 S 40577 Xenorhabdus poinarii 0.00 1 1 S1 1354304 Xenorhabdus poinarii G6 0.00 1 0 G 581 Morganella 0.00 1 1 S 582 Morganella morganii 0.00 1 0 G 637 Arsenophonus 0.00 1 1 S 638 Arsenophonus nasoniae 0.01 3 0 F 1903410 Pectobacteriaceae 0.00 2 0 G 122277 Pectobacterium 0.00 1 1 S 2485124 Pectobacterium polonicum 0.00 1 1 S 1905730 Pectobacterium parmentieri 0.00 1 0 G 71655 Brenneria 0.00 1 1 S 55213 Brenneria rubrifaciens 0.00 2 0 F 3120698 Gallaecimonadaceae 0.00 2 0 G 745410 Gallaecimonas 0.00 2 2 S 2291597 Gallaecimonas mangrovi 0.00 1 0 F 1903412 Hafniaceae 0.00 1 0 G 635 Edwardsiella 0.00 1 1 S 1263550 Edwardsiella piscicida 0.17 90 1 O 135613 Chromatiales 0.13 66 9 F 1046 Chromatiaceae 0.08 41 2 G 67575 Rheinheimera 0.08 39 0 G1 115860 unclassified Rheinheimera 0.05 26 26 S 3072790 Rheinheimera sp. MMS21-TC3 0.02 12 12 S 1763998 Rheinheimera sp. F8 0.00 1 1 S 3019969 Rheinheimera sp. MM224 0.01 6 2 G 2796146 Candidatus Nitrosacidococcus 0.01 4 4 S 553981 Candidatus Nitrosacidococcus tergens 0.01 5 1 G 85072 Allochromatium 0.01 3 3 S 553982 Allochromatium tepidum 0.00 1 0 S 1049 Allochromatium vinosum 0.00 1 1 S1 572477 Allochromatium vinosum DSM 180 0.00 2 1 G 1056 Thiocapsa 0.00 1 1 S 521689 Thiocapsa bogorovii 0.00 1 0 G 13724 Thiocystis 0.00 1 0 S 73141 Thiocystis violascens 0.00 1 1 S1 765911 Thiocystis violascens DSM 198 0.00 1 0 G 85076 Marichromatium 0.00 1 0 S 37487 Marichromatium purpuratum 0.00 1 1 S1 765910 Marichromatium purpuratum 984 0.00 1 0 G 2828366 Caldichromatium 0.00 1 1 S 2699430 Caldichromatium japonicum 0.04 19 0 F 72276 Ectothiorhodospiraceae 0.03 14 0 G 1765964 Acidihalobacter 0.03 13 13 S 1765967 Acidihalobacter ferrooxydans 0.00 1 1 S 2792603 Acidihalobacter aeolianus 0.00 2 1 G 85108 Halorhodospira 0.00 1 1 S 1052 Halorhodospira halochloris 0.00 1 0 G 106633 Thioalkalivibrio 0.00 1 0 S 108010 Thioalkalivibrio paradoxus 0.00 1 1 S1 713585 Thioalkalivibrio paradoxus ARh 1 0.00 1 0 G 133193 Alkalilimnicola 0.00 1 0 S 351052 Alkalilimnicola ehrlichii 0.00 1 1 S1 187272 Alkalilimnicola ehrlichii MLHE-1 0.00 1 0 G 233099 Ectothiorhodosinus 0.00 1 1 S 233100 Ectothiorhodosinus mongolicus 0.00 2 0 F 2035710 Thioalkalibacteraceae 0.00 2 0 G 2035712 Guyparkeria 0.00 2 2 S 47960 Guyparkeria halophila 0.00 2 0 F 3067276 Sedimenticolaceae 0.00 1 1 G 349742 Sedimenticola 0.00 1 0 G 1608298 Thiolapillus 0.00 1 1 S 1076588 Thiolapillus brandeum 0.17 86 0 O 135618 Methylococcales 0.17 86 61 F 403 Methylococcaceae 0.02 9 0 G 1760987 Methylomagnum 0.02 9 9 S 1760988 Methylomagnum ishizawai 0.02 8 2 G 413 Methylococcus 0.01 5 5 S 414 Methylococcus capsulatus 0.00 1 0 G1 2618889 unclassified Methylococcus 0.00 1 1 S 2812648 Methylococcus sp. EFPC2 0.01 4 0 G 1295378 Methylogaea 0.01 4 4 S 1295382 Methylogaea oryzae 0.00 2 0 G 1808977 Candidatus Methylospira 0.00 2 2 S 1808979 Candidatus Methylospira mobilis 0.00 1 0 G 429 Methylobacter 0.00 1 0 G1 2635283 unclassified Methylobacter 0.00 1 1 S 2839024 Methylobacter sp. S3L5C 0.00 1 0 G 3135206 Candidatus Methylocalor 0.00 1 1 S 3108543 Candidatus Methylocalor cossyra 0.14 75 0 O 2887326 Moraxellales 0.14 75 4 F 468 Moraxellaceae 0.13 67 34 G 469 Acinetobacter 0.05 24 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.04 20 20 S 470 Acinetobacter baumannii 0.01 3 0 S 48296 Acinetobacter pittii 0.01 3 3 S1 871585 Acinetobacter pittii PHEA-2 0.00 1 1 S 106654 Acinetobacter nosocomialis 0.01 4 4 S 202956 Acinetobacter towneri 0.01 3 0 G1 196816 unclassified Acinetobacter 0.00 1 1 S 2929509 Acinetobacter sp. NyZ410 0.00 1 1 S 2919376 Acinetobacter sp. AOR07_HL 0.00 1 1 S 3138069 Acinetobacter sp. D009 0.00 1 1 S 40214 Acinetobacter johnsonii 0.00 1 1 S 40215 Acinetobacter junii 0.00 2 2 G 475 Moraxella 0.00 2 0 G 497 Psychrobacter 0.00 2 0 G1 196806 unclassified Psychrobacter 0.00 2 2 S 1415574 Psychrobacter sp. LV10R520-6 0.06 31 0 O 135623 Vibrionales 0.06 31 4 F 641 Vibrionaceae 0.04 23 3 G 662 Vibrio 0.02 11 11 S 666 Vibrio cholerae 0.01 4 0 G1 717610 Vibrio harveyi group 0.01 4 4 S 669 Vibrio harveyi 0.01 3 0 G1 2614977 unclassified Vibrio 0.01 3 3 S 2661921 Vibrio sp. THAF191c 0.00 1 1 S 2572923 Vibrio taketomensis 0.00 1 0 S 52443 Vibrio tapetis 0.00 1 1 S1 1671868 Vibrio tapetis subsp. tapetis 0.01 4 0 G 657 Photobacterium 0.01 4 4 S 553611 Photobacterium leiognathi 0.05 26 2 O 135622 Alteromonadales 0.02 10 0 F 267890 Shewanellaceae 0.02 10 0 G 22 Shewanella 0.01 7 7 S 62322 Shewanella baltica 0.01 3 3 S 24 Shewanella putrefaciens 0.01 5 0 F 267889 Colwelliaceae 0.01 4 0 G 1518149 Thalassotalea 0.01 4 0 G1 2614972 unclassified Thalassotalea 0.01 4 4 S 2594005 Thalassotalea sp. PS06 0.00 1 1 G 28228 Colwellia 0.01 4 0 F 72275 Alteromonadaceae 0.00 1 0 G 1621534 Paraglaciecola 0.00 1 0 S 326544 Paraglaciecola psychrophila 0.00 1 1 S1 1129794 Paraglaciecola psychrophila 170 0.00 1 0 G 2650549 Hydrocarboniclastica 0.00 1 1 S 2259620 Hydrocarboniclastica marina 0.00 1 0 G 2894574 Saccharobesus 0.00 1 1 S 2172099 Saccharobesus litoralis 0.00 1 0 F1 2903219 Alteromonas/Salinimonas group 0.00 1 1 G 226 Alteromonas 0.01 3 1 F 267893 Idiomarinaceae 0.00 2 0 G 2800384 Pseudidiomarina 0.00 2 2 S 1940690 Pseudidiomarina andamanensis 0.00 1 0 F 267888 Pseudoalteromonadaceae 0.00 1 0 G 53246 Pseudoalteromonas 0.00 1 0 G1 194690 unclassified Pseudoalteromonas 0.00 1 1 S 2785910 Pseudoalteromonas sp. A41-2 0.00 1 0 F 267894 Psychromonadaceae 0.00 1 0 G 67572 Psychromonas 0.00 1 0 S 357794 Psychromonas ingrahamii 0.00 1 1 S1 357804 Psychromonas ingrahamii 37 0.04 23 0 O 72273 Thiotrichales 0.04 21 3 F 135616 Piscirickettsiaceae 0.03 15 3 G 40222 Methylophaga 0.02 9 9 S 2881052 Methylophaga pinxianii 0.01 3 3 S 40223 Methylophaga thalassica 0.00 2 0 G 2039723 Thiomicrorhabdus 0.00 2 2 S 2211106 Thiomicrorhabdus aquaedulcis 0.00 1 1 G 34067 Cycloclasticus 0.00 2 0 F 135617 Thiotrichaceae 0.00 2 1 G 1030 Thiothrix 0.00 1 1 S 2735563 Thiothrix subterranea 0.04 20 0 O 118969 Legionellales 0.02 12 0 F 444 Legionellaceae 0.02 12 1 G 445 Legionella 0.02 10 0 S 446 Legionella pneumophila 0.02 10 0 S1 91891 Legionella pneumophila subsp. pneumophila 0.02 10 10 S2 272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 0.00 1 0 G1 2622702 unclassified Legionella 0.00 1 1 S 2755562 Legionella sp. PC997 0.02 8 1 F 118968 Coxiellaceae 0.01 5 1 G 254245 Aquicella 0.01 4 4 S 254247 Aquicella siphonis 0.00 1 0 G 776 Coxiella 0.00 1 0 G1 2676648 unclassified Coxiella (in: g-proteobacteria) 0.00 1 1 S 2749996 Coxiella endosymbiont of Amblyomma nuttalli 0.00 1 0 F1 134284 unclassified Coxiellaceae 0.00 1 1 S 1592897 Coxiella-like endosymbiont 0.03 15 0 O 1706369 Cellvibrionales 0.02 11 0 F 1706371 Cellvibrionaceae 0.02 10 1 G 10 Cellvibrio 0.02 8 3 G1 2624793 unclassified Cellvibrio 0.01 5 5 S 1987723 Cellvibrio sp. PSBB006 0.00 1 1 S 155077 Cellvibrio japonicus 0.00 1 0 G 2425 Teredinibacter 0.00 1 1 S 2426 Teredinibacter turnerae 0.00 2 0 F 1706372 Halieaceae 0.00 2 0 G 2847769 Aequoribacter 0.00 2 2 S 2518989 Aequoribacter fuscus 0.00 1 0 F 1706373 Microbulbiferaceae 0.00 1 0 G 48073 Microbulbifer 0.00 1 1 S 435905 Microbulbifer celer 0.00 1 0 F 1706375 Spongiibacteraceae 0.00 1 0 G 1084558 Oceanicoccus 0.00 1 1 S 716816 Oceanicoccus sagamiensis 0.03 14 0 O 135624 Aeromonadales 0.03 14 0 F 84642 Aeromonadaceae 0.02 12 1 G 642 Aeromonas 0.02 9 9 S 654 Aeromonas veronii 0.00 2 2 S 645 Aeromonas salmonicida 0.00 2 0 G 43947 Tolumonas 0.00 1 1 S 43948 Tolumonas auensis 0.00 1 0 G1 263764 environmental samples 0.00 1 1 S 263765 uncultured Tolumonas sp. 0.01 5 0 O 135625 Pasteurellales 0.01 5 2 F 712 Pasteurellaceae 0.00 2 0 G 713 Actinobacillus 0.00 2 0 S 718 Actinobacillus equuli 0.00 2 2 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 1 0 G 416916 Aggregatibacter 0.00 1 1 S 714 Aggregatibacter actinomycetemcomitans 0.01 4 0 C1 118884 Gammaproteobacteria incertae sedis 0.00 2 0 G 204619 Candidatus Nardonella 0.00 2 2 S 1972134 endosymbiont of Sipalinus gigas 0.00 1 0 C2 32036 sulfur-oxidizing symbionts 0.00 1 0 G 2686004 Candidatus Vondammii 0.00 1 0 G1 2687300 unclassified Candidatus Vondammii 0.00 1 1 S 2687299 Candidatus Vondammii sp. HM_W22 0.00 1 0 F 3119552 Candidatus Azoamicaceae 0.00 1 0 G 2817383 Candidatus Azoamicus 0.00 1 1 S 2652803 Candidatus Azoamicus ciliaticola 0.01 3 0 O 3060226 Steroidobacterales 0.01 3 0 F 2689614 Steroidobacteraceae 0.01 3 0 G 469322 Steroidobacter 0.01 3 3 S 465721 Steroidobacter denitrificans 0.00 2 0 C1 33811 unclassified Gammaproteobacteria 0.00 2 2 S 1248727 endosymbiont of unidentified scaly snail isolate Monju 0.00 2 0 O 1775403 Nevskiales 0.00 2 0 F 568386 Nevskiaceae 0.00 1 0 G 413435 Solimonas 0.00 1 0 G1 2637139 unclassified Solimonas 0.00 1 1 S 2303331 Solimonas sp. K1W22B-7 0.00 1 0 G 2893022 Flagellatimonas 0.00 1 1 S 2806210 Flagellatimonas centrodinii 0.00 1 0 O 1692040 Acidiferrobacterales 0.00 1 0 F 1692041 Acidiferrobacteraceae 0.00 1 0 G 1692042 Sulfurifustis 0.00 1 1 S 1675686 Sulfurifustis variabilis 0.00 1 0 O 1934945 Immundisolibacterales 0.00 1 0 F 1934946 Immundisolibacteraceae 0.00 1 0 G 1934947 Immundisolibacter 0.00 1 1 S 1810504 Immundisolibacter cernigliae 0.00 1 0 O 3084968 Thiohalomonadales 0.00 1 0 F 3084969 Thiohalomonadaceae 0.00 1 0 G 2034504 Sulfurivermis 0.00 1 1 S 1972068 Sulfurivermis fontis 4.68 2424 38 C 28216 Betaproteobacteria 4.05 2099 46 O 80840 Burkholderiales 1.77 919 0 O1 224471 Burkholderiales genera incertae sedis 1.74 901 157 G 32012 Thiomonas 1.43 740 740 S 926 Thiomonas intermedia 0.01 4 0 G1 2625466 unclassified Thiomonas 0.01 4 4 S 2493107 Thiomonas sp. OC7 0.02 10 0 G 114248 Tepidimonas 0.02 10 10 S 307486 Tepidimonas taiwanensis 0.01 5 0 G 92793 Aquabacterium 0.01 5 5 S 1296669 Aquabacterium olei 0.01 3 0 G 2929841 Candidatus Ichthyocystis 0.01 3 3 S 1561003 Candidatus Ichthyocystis hellenicum 1.45 751 214 F 119060 Burkholderiaceae 0.36 189 127 G 32008 Burkholderia 0.06 31 2 G1 111527 pseudomallei group 0.03 17 3 S 28450 Burkholderia pseudomallei 0.01 7 7 S1 1249468 Burkholderia pseudomallei NCTC 13178 0.01 4 4 S1 557724 Burkholderia pseudomallei 576 0.01 3 3 S1 1249470 Burkholderia pseudomallei MSHR1079 0.02 8 5 S 57975 Burkholderia thailandensis 0.01 3 3 S1 1249663 Burkholderia thailandensis H0587 0.01 3 3 S 342113 Burkholderia oklahomensis 0.00 1 1 S 13373 Burkholderia mallei 0.06 29 5 G1 87882 Burkholderia cepacia complex 0.01 5 5 S 87883 Burkholderia multivorans 0.01 5 5 S 95485 Burkholderia stabilis 0.01 4 4 S 292 Burkholderia cepacia 0.01 3 3 S 488447 Burkholderia contaminans 0.00 2 2 S 152500 Burkholderia dolosa 0.00 1 1 S 60552 Burkholderia vietnamiensis 0.00 1 0 S 95486 Burkholderia cenocepacia 0.00 1 1 S1 1055524 Burkholderia cenocepacia H111 0.00 1 0 S 101571 Burkholderia ubonensis 0.00 1 1 S1 1249668 Burkholderia ubonensis MSMB22 0.00 1 1 S 152480 Burkholderia ambifaria 0.00 1 1 S 179879 Burkholderia anthina 0.00 1 1 S 28095 Burkholderia gladioli 0.00 1 0 G1 2613784 unclassified Burkholderia 0.00 1 1 S 1494466 Burkholderia sp. FERM BP-3421 0.24 126 126 G 131079 Limnobacter 0.18 91 0 G 2571160 Trinickia 0.18 91 91 S 28094 Trinickia caryophylli 0.10 53 1 G 48736 Ralstonia 0.08 44 0 G1 3116862 Ralstonia solanacearum species complex 0.08 39 39 S 305 Ralstonia solanacearum 0.01 5 5 S 1310165 Ralstonia pseudosolanacearum 0.02 8 0 G1 209769 unclassified Ralstonia 0.02 8 8 S 2880990 Ralstonia sp. RS650 0.07 35 35 G 2571159 Mycetohabitans 0.03 14 10 G 44013 Polynucleobacter 0.00 2 2 S 576610 Polynucleobacter necessarius 0.00 2 0 G1 2640945 unclassified Polynucleobacter 0.00 2 2 S 2689107 Polynucleobacter sp. MWH-CaK5 0.02 8 6 G 106589 Cupriavidus 0.00 1 1 S 119219 Cupriavidus metallidurans 0.00 1 1 S 367825 Cupriavidus malaysiensis 0.01 6 4 G 1822464 Paraburkholderia 0.00 2 2 S 2571748 Paraburkholderia acidisoli 0.01 4 2 G 2018044 Candidatus Vallotia 0.00 2 2 S 1177213 Candidatus Vallotia tarda 0.01 4 0 G 2038280 Robbsia 0.01 4 0 G1 2636574 unclassified Robbsia 0.01 4 4 S 3149231 Robbsia sp. KACC 23696 0.00 2 0 G 47670 Lautropia 0.00 2 2 S 47671 Lautropia mirabilis 0.00 2 2 G 1810868 Mycoavidus 0.00 2 1 G 1827195 Caballeronia 0.00 1 0 G1 2646786 unclassified Caballeronia 0.00 1 1 S 2878152 Caballeronia sp. Sq4a 0.00 1 1 G 93217 Pandoraea 0.37 191 22 F 80864 Comamonadaceae 0.22 116 101 G 47420 Hydrogenophaga 0.02 12 1 G1 2610897 unclassified Hydrogenophaga 0.01 7 7 S 2806347 Hydrogenophaga sp. SL48 0.01 3 3 S 2565558 Hydrogenophaga sp. PAMC20947 0.00 1 1 S 2651974 Hydrogenophaga sp. BPS33 0.00 2 2 S 2716225 Hydrogenophaga crocea 0.00 1 0 G1 199682 environmental samples 0.00 1 1 S 199683 uncultured Hydrogenophaga sp. 0.03 14 4 G 283 Comamonas 0.02 8 8 S 2743470 Comamonas antarctica 0.00 1 1 S 363952 Comamonas thiooxydans 0.00 1 0 G1 2638500 unclassified Comamonas 0.00 1 1 S 2918299 Comamonas sp. B21-038 0.03 13 13 G 28065 Rhodoferax 0.01 7 5 G 12916 Acidovorax 0.00 2 0 G1 2684926 unclassified Acidovorax 0.00 2 2 S 2518343 Acidovorax sp. JMULE5 0.01 4 3 G 34072 Variovorax 0.00 1 1 G1 663243 unclassified Variovorax 0.01 4 0 G 352450 Simplicispira 0.01 4 4 S 2109915 Simplicispira suum 0.01 3 0 G 665874 Limnohabitans 0.01 3 3 G1 2626134 unclassified Limnohabitans 0.00 2 2 G 52972 Polaromonas 0.00 2 0 G 174951 Ramlibacter 0.00 2 2 S 94132 Ramlibacter tataouinensis 0.00 1 1 G 80865 Delftia 0.00 1 0 G 2919468 Vandammella 0.00 1 1 S 2029117 Vandammella animalimorsus 0.00 1 0 G 1436289 Candidatus Symbiobacter 0.00 1 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 1 1 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 1 0 G 364316 Verminephrobacter 0.00 1 0 S 364317 Verminephrobacter eiseniae 0.00 1 1 S1 391735 Verminephrobacter eiseniae EF01-2 0.19 98 18 F 506 Alcaligenaceae 0.04 19 13 G 222 Achromobacter 0.01 3 3 S 85698 Achromobacter xylosoxidans 0.00 2 2 S 217204 Achromobacter insolitus 0.00 1 1 S 217203 Achromobacter spanius 0.04 19 0 G 359336 Castellaniella 0.04 19 0 S 75697 Castellaniella defragrans 0.04 19 19 S1 1437824 Castellaniella defragrans 65Phen 0.03 16 1 G 517 Bordetella 0.03 15 15 S 94624 Bordetella petrii 0.02 11 0 G 1921582 Orrella 0.01 6 6 S 1851544 Orrella dioscoreae 0.01 5 5 S 2782176 Orrella daihaiensis 0.01 5 0 G 305976 Pusillimonas 0.01 5 0 G1 2640016 unclassified Pusillimonas 0.01 4 4 S 2716226 Pusillimonas sp. DMV24BSW_D 0.00 1 1 S 1007105 Pusillimonas sp. T7-7 0.01 4 0 G 152267 Pigmentiphaga 0.01 3 3 S 1940612 Pigmentiphaga aceris 0.00 1 1 G1 2626614 unclassified Pigmentiphaga 0.00 2 0 G 90243 Oligella 0.00 1 1 S 90244 Oligella ureolytica 0.00 1 1 S 90245 Oligella urethralis 0.00 2 0 G 290425 Advenella 0.00 2 2 S 1481665 Advenella alkanexedens 0.00 1 0 G 2987605 Neopusillimonas 0.00 1 1 S 2979868 Neopusillimonas aromaticivorans 0.00 1 0 G 106146 Pelistega 0.00 1 1 S 2652177 Pelistega ratti 0.11 56 2 F 75682 Oxalobacteraceae 0.06 33 24 G 963 Herbaspirillum 0.02 9 9 S 92645 Herbaspirillum frisingense 0.02 12 6 F1 2895353 Telluria group 0.01 5 2 G 149698 Massilia 0.00 2 2 S 457921 Massilia varians 0.00 1 0 G1 2609279 unclassified Massilia 0.00 1 1 S 1707785 Massilia sp. WG5 0.00 1 1 G 1522432 Pseudoduganella 0.01 4 1 G 401469 Undibacterium 0.01 3 0 G1 2630295 unclassified Undibacterium 0.01 3 3 S 3048609 Undibacterium sp. CCC3.4 0.01 4 0 G 1344552 Noviherbaspirillum 0.01 4 0 G1 2617509 unclassified Noviherbaspirillum 0.01 4 4 S 2601898 Noviherbaspirillum sp. UKPF54 0.00 1 0 G 1051898 Actimicrobium 0.00 1 0 G1 2624959 unclassified Actimicrobium 0.00 1 1 S 3048606 Actimicrobium sp. CCC2.4 0.07 34 3 F 2975441 Sphaerotilaceae 0.03 14 8 G 196013 Caldimonas 0.01 6 6 S 376175 Schlegelella aquatica 0.02 10 0 G 1114981 Piscinibacter 0.02 8 8 S 946333 Piscinibacter gummiphilus 0.00 2 0 G1 2627988 unclassified Piscinibacter 0.00 2 2 S 3037797 Piscinibacter sp. XHJ-5 0.00 2 0 G 391952 Aquincola 0.00 2 2 S 391953 Aquincola tertiaricarbonis 0.00 2 0 G 644355 Inhella 0.00 2 2 S 392593 Inhella inkyongensis 0.00 1 0 G 34102 Sphaerotilus 0.00 1 1 S 639200 Sphaerotilus sulfidivorans 0.00 1 0 G 93681 Roseateles 0.00 1 0 G1 2626991 unclassified Roseateles 0.00 1 1 S 2877940 Roseateles sp. XES5 0.00 1 1 G 316612 Methylibium 0.01 4 1 F 995019 Sutterellaceae 0.00 2 0 G 40544 Sutterella 0.00 1 1 S 40545 Sutterella wadsworthensis 0.00 1 1 S 2494234 Sutterella megalosphaeroides 0.00 1 0 G 1980697 Duodenibacillus 0.00 1 1 S 1852381 Duodenibacillus massiliensis 0.30 156 13 O 206389 Rhodocyclales 0.12 64 3 F 2008795 Azonexaceae 0.09 49 4 G 73029 Dechloromonas 0.04 23 23 S 281362 Dechloromonas denitrificans 0.04 22 0 G1 2633351 unclassified Dechloromonas 0.04 22 22 S 447588 Dechloromonas sp. A34 0.02 12 0 G 146936 Azonexus 0.02 12 12 S 418702 Azonexus hydrophilus 0.10 51 1 F 75787 Rhodocyclaceae 0.09 48 0 G 551759 Aromatoleum 0.09 48 48 S 76116 Aromatoleum petrolei 0.00 1 0 G 146937 Azospira 0.00 1 1 S 2785627 Azospira inquinata 0.00 1 0 G 1911577 Oryzomicrobium 0.00 1 1 S 1735038 Oryzomicrobium terrae 0.03 17 1 F 2008794 Zoogloeaceae 0.03 15 15 G 2891294 Nitrogeniibacter 0.00 1 0 G 33057 Thauera 0.00 1 0 G1 2609274 unclassified Thauera 0.00 1 1 S 2005884 Thauera sp. K11 0.02 11 0 F 2808923 Fluviibacteraceae 0.02 11 0 G 2808942 Fluviibacter 0.02 11 11 S 1751046 Fluviibacter phosphoraccumulans 0.20 106 11 O 32003 Nitrosomonadales 0.06 29 12 F 32011 Methylophilaceae 0.01 7 0 G 2872156 Methyloradius 0.01 7 7 S 2778876 Methyloradius palustris 0.01 4 0 G 359407 Methylotenera 0.01 4 0 S 359408 Methylotenera mobilis 0.01 4 4 S1 583345 Methylotenera mobilis JLW8 0.01 3 0 G 16 Methylophilus 0.01 3 3 S 17 Methylophilus methylotrophus 0.00 2 2 G 81682 Methylovorus 0.00 1 0 G 1679002 Candidatus Methylopumilus 0.00 1 1 S 1581680 Candidatus Methylopumilus turicensis 0.04 21 1 F 2008793 Sterolibacteriaceae 0.01 7 0 G 3050898 Sulfuricystis 0.01 4 4 S 2496847 Sulfuricystis thermophila 0.01 3 3 S 2211108 Sulfuricystis multivorans 0.01 6 0 G 378210 Methyloversatilis 0.01 6 0 G1 2639971 unclassified Methyloversatilis 0.01 6 6 S 1842540 Methyloversatilis sp. RAC08 0.01 3 0 G 157591 Sterolibacterium 0.01 3 3 S 157592 Sterolibacterium denitrificans 0.00 2 0 G 1054211 Sulfuritalea 0.00 2 0 S 748811 Sulfuritalea hydrogenivorans 0.00 2 2 S1 1223802 Sulfuritalea hydrogenivorans sk43H 0.00 1 1 G 311181 Denitratisoma 0.00 1 0 G 1914449 Rugosibacter 0.00 1 1 S 1565605 Rugosibacter aromaticivorans 0.04 19 3 F 206379 Nitrosomonadaceae 0.03 16 11 G 914 Nitrosomonas 0.01 4 0 G1 2609265 unclassified Nitrosomonas 0.01 4 4 S 261292 Nitrosomonas sp. Is79A3 0.00 1 1 S 44577 Nitrosomonas ureae 0.02 9 4 F 90627 Gallionellaceae 0.00 2 2 G 453161 Candidatus Nitrotoga 0.00 2 0 G 1443590 Ferriphaselus 0.00 2 2 S 1188319 Ferriphaselus amnicola 0.00 1 0 G 2249462 Ferrigenium 0.00 1 1 S 1682490 Ferrigenium kumadai 0.02 9 0 F 2008790 Thiobacillaceae 0.01 7 1 G 919 Thiobacillus 0.01 6 0 G1 2646513 unclassified Thiobacillus 0.01 4 4 S 924 Thiobacillus sp. 0.00 2 2 S 3110231 Thiobacillus sp. SCUT-2 0.00 2 0 G 1938335 Sulfuritortus 0.00 2 2 S 1914471 Sulfuritortus calidifontis 0.01 5 0 F 2772226 Sulfuricellaceae 0.01 5 2 G 1778653 Sulfuriferula 0.01 3 3 S 171865 Sulfuriferula plumbiphila 0.01 3 0 F 2803844 Usitatibacteraceae 0.01 3 2 G 2803845 Usitatibacter 0.00 1 1 S 2732487 Usitatibacter palustris 0.03 15 3 O 206351 Neisseriales 0.02 8 2 F 481 Neisseriaceae 0.00 2 2 G 59 Vitreoscilla 0.00 2 0 G 2944815 Wielerella 0.00 2 2 S 2917790 Wielerella bovis 0.00 1 0 G 334107 Conchiformibius 0.00 1 1 S 153493 Conchiformibius steedae 0.00 1 0 G 2593687 Aquella 0.00 1 1 S 2067065 Aquella oligotrophica 0.01 3 1 F 2897177 Chitinibacteraceae 0.00 2 2 G 400947 Deefgea 0.00 1 1 F 1499392 Chromobacteriaceae 0.02 10 0 C1 119066 Betaproteobacteria incertae sedis 0.01 7 0 F 2705999 Casimicrobiaceae 0.01 7 0 G 2706000 Casimicrobium 0.01 7 7 S 2591109 Casimicrobium huifangae 0.00 1 0 G 33055 Candidatus Kinetoplastibacterium 0.00 1 1 S 33056 Candidatus Kinetoplastibacterium crithidii 0.00 1 0 G 1301080 Candidatus Nasuia 0.00 1 1 S 1160784 Candidatus Nasuia deltocephalinicola 0.00 1 0 G 1381133 Candidatus Profftella 0.00 1 1 S 2661583 Candidatus Profftella armatura (Diaphorina cf. continua) 2.59 1343 0 D1 1783270 FCB group 2.58 1338 0 D2 68336 Bacteroidota/Chlorobiota group 2.57 1331 1 P 976 Bacteroidota 1.31 681 0 C 117747 Sphingobacteriia 1.31 681 0 O 200666 Sphingobacteriales 1.31 681 2 F 84566 Sphingobacteriaceae 1.28 665 90 G 28453 Sphingobacterium 1.03 536 512 G1 2609468 unclassified Sphingobacterium 0.03 16 16 S 2996035 Sphingobacterium sp. SYP-B4668 0.01 3 3 S 3031802 Sphingobacterium sp. WM 0.01 3 3 S 2907623 Sphingobacterium sp. SRCM116780 0.00 1 1 S 3112958 Sphingobacterium sp. R2 0.00 1 1 S 2662364 Sphingobacterium sp. dk4302 0.07 36 36 S 1010 Sphingobacterium mizutaii 0.00 1 1 S 258 Sphingobacterium spiritivorum 0.00 1 1 S 28454 Sphingobacterium multivorum 0.00 1 1 S 561061 Sphingobacterium psychroaquaticum 0.02 10 5 G 84567 Pedobacter 0.01 4 4 S 2605747 Pedobacter aquae 0.00 1 1 S 363852 Pedobacter ginsengisoli 0.00 2 0 G 376469 Olivibacter 0.00 2 0 G1 2632301 unclassified Olivibacter 0.00 2 2 S 2592345 Olivibacter sp. LS-1 0.00 2 0 G 423349 Mucilaginibacter 0.00 1 0 G1 2617802 unclassified Mucilaginibacter 0.00 1 1 S 2703789 Mucilaginibacter sp. 14171R-50 0.00 1 1 S 2740462 Mucilaginibacter mali 0.80 413 0 C 117743 Flavobacteriia 0.80 413 0 O 200644 Flavobacteriales 0.77 399 12 F 49546 Flavobacteriaceae 0.69 358 305 G 237 Flavobacterium 0.03 18 2 G1 196869 unclassified Flavobacterium 0.02 8 8 S 1979344 Flavobacterium sp. MDT1-60 0.01 3 3 S 2654325 Flavobacterium sp. xlx-214 0.00 2 2 S 2732161 Flavobacterium sp. IMCC34852 0.00 1 1 S 2775246 Flavobacterium sp. CS20 0.00 1 1 S 2746225 Flavobacterium sp. K5-23 0.00 1 1 S 2739062 Flavobacterium sp. M31R6 0.02 9 9 S 2175091 Flavobacterium album 0.01 4 4 S 2906076 Flavobacterium covae 0.01 4 4 S 2602769 Flavobacterium alkalisoli 0.01 3 3 S 2897181 Flavobacterium channae 0.00 2 2 S 996 Flavobacterium columnare 0.00 2 2 S 2870839 Flavobacterium agricola 0.00 2 2 S 2294119 Flavobacterium psychrotrophum 0.00 2 2 S 2162713 Flavobacterium magnum 0.00 2 2 S 96345 Flavobacterium psychrophilum 0.00 1 1 S 683124 Flavobacterium haoranii 0.00 1 1 S 3003263 Flavobacterium eburneipallidum 0.00 1 1 S 2906077 Flavobacterium davisii 0.00 1 1 S 2906078 Flavobacterium oreochromis 0.00 1 1 S 1306519 Flavobacterium commune 0.03 18 0 G 1386924 Aestuariibaculum 0.03 18 0 G1 2646735 unclassified Aestuariibaculum 0.03 18 18 S 3070659 Aestuariibaculum sp. YM273 0.01 3 0 G 252356 Maribacter 0.00 2 2 S 1836467 Maribacter hydrothermalis 0.00 1 1 S 1178778 Maribacter cobaltidurans 0.00 1 1 G 283735 Leeuwenhoekiella 0.00 1 0 G 449810 Lutimonas 0.00 1 1 S 3060215 Lutimonas zeaxanthinifaciens 0.00 1 1 G 358023 Lutibacter 0.00 1 0 G 286104 Winogradskyella 0.00 1 1 G1 2615021 unclassified Winogradskyella 0.00 1 1 G 221065 Kordia 0.00 1 1 G 143222 Salegentibacter 0.00 1 0 G 1016 Capnocytophaga 0.00 1 1 S 1848904 Capnocytophaga stomatis 0.00 1 1 G 76831 Myroides 0.02 10 0 F 2762318 Weeksellaceae 0.02 9 0 F1 2782232 Chryseobacterium group 0.02 9 1 G 59732 Chryseobacterium 0.01 5 5 S 192389 Chryseobacterium daecheongense 0.01 3 3 S 1493872 Chryseobacterium shandongense 0.00 1 0 G 59735 Bergeyella 0.00 1 1 S 1585976 Bergeyella cardium 0.01 3 0 F 39782 Blattabacteriaceae 0.01 3 3 G 34098 Blattabacterium 0.00 1 0 F 1853230 Crocinitomicaceae 0.00 1 0 G 332102 Fluviicola 0.00 1 0 S 191579 Fluviicola taffensis 0.00 1 1 S1 755732 Fluviicola taffensis DSM 16823 0.17 86 0 C 768503 Cytophagia 0.17 86 0 O 768507 Cytophagales 0.14 70 0 F 563798 Cyclobacteriaceae 0.14 70 0 G 246875 Algoriphagus 0.14 70 0 G1 2641541 unclassified Algoriphagus 0.14 70 70 S 2705473 Algoriphagus sp. NBT04N3 0.01 3 0 F 89373 Cytophagaceae 0.00 2 0 G 107 Spirosoma 0.00 2 2 S 2666025 Spirosoma endbachense 0.00 1 0 G 455076 Rhodocytophaga 0.00 1 1 S 2704465 Rhodocytophaga rosea 0.01 3 0 F 3141701 Flectobacillaceae 0.01 3 1 G 2676247 Aquirufa 0.00 2 2 S 2516557 Aquirufa nivalisilvae 0.00 2 0 F 1501348 Amoebophilaceae 0.00 1 0 G 273135 Candidatus Cardinium 0.00 1 1 G1 2641185 unclassified Candidatus Cardinium 0.00 1 0 G 281119 Candidatus Amoebophilus 0.00 1 0 S 281120 Candidatus Amoebophilus asiaticus 0.00 1 1 S1 452471 Candidatus Amoebophilus asiaticus 5a2 0.00 2 0 F 1853232 Hymenobacteraceae 0.00 1 1 G 89966 Hymenobacter 0.00 1 0 G 299566 Adhaeribacter 0.00 1 1 S 2086471 Adhaeribacter swui 0.00 2 0 F 2762286 Fulvivirgaceae 0.00 2 0 G 1433993 Chryseolinea 0.00 2 2 S 2321403 Chryseolinea soli 0.00 2 0 F 2896860 Spirosomataceae 0.00 1 0 G 105 Runella 0.00 1 0 G1 2631759 unclassified Runella 0.00 1 1 S 2268026 Runella sp. SP2 0.00 1 0 G 861914 Fibrella 0.00 1 0 S 651143 Fibrella aestuarina 0.00 1 1 S1 1166018 Fibrella aestuarina BUZ 2 0.00 2 0 F 3141702 Leadbetterellaceae 0.00 2 0 G 2975149 Marinilongibacter 0.00 2 2 S 2975157 Marinilongibacter aquaticus 0.13 68 0 P1 171558 Bacteroidetes incertae sedis 0.13 68 0 O 2923288 Candidatus Sulfidibacteriales 0.13 68 0 G 2923290 Candidatus Sulfidibacterium 0.13 68 68 S 2875962 Candidatus Sulfidibacterium hydrothermale 0.12 62 0 C 1853228 Chitinophagia 0.12 62 0 O 1853229 Chitinophagales 0.12 62 4 F 563835 Chitinophagaceae 0.03 13 6 G 1004301 Flavihumibacter 0.01 7 7 S 2838157 Flavihumibacter fluvii 0.02 11 5 G 79328 Chitinophaga 0.01 3 3 S 536979 Chitinophaga niabensis 0.00 2 2 G1 2619133 unclassified Chitinophaga 0.00 1 1 S 2029983 Chitinophaga caeni 0.02 10 0 G 1860196 Pseudobacter 0.02 10 10 S 661488 Pseudobacter ginsenosidimutans 0.01 5 0 G 379899 Niabella 0.01 3 3 S 577386 Niabella yanshanensis 0.00 2 2 S 1176587 Niabella ginsenosidivorans 0.01 4 0 G 504481 Sediminibacterium 0.01 4 2 G1 2635961 unclassified Sediminibacterium 0.00 2 2 S 575378 Sediminibacterium sp. TEGAF015 0.01 4 4 G 2698688 Paraflavitalea 0.01 3 3 G 1769012 Arachidicoccus 0.00 2 0 G 2812019 Pseudocnuella 0.00 2 2 S 2502779 Pseudocnuella soli 0.00 1 0 G 354354 Niastella 0.00 1 0 S 354356 Niastella koreensis 0.00 1 1 S1 700598 Niastella koreensis GR20-10 0.00 1 0 G 2836216 Phnomibacter 0.00 1 1 S 2676868 Phnomibacter ginsenosidimutans 0.00 1 0 G 1649506 Thermoflavifilum 0.00 1 0 G1 3099314 unclassified Thermoflavifilum 0.00 1 1 S 1968839 Thermoflavifilum sp. 0.00 1 1 G 1004303 Ferruginibacter 0.00 1 0 G 649461 Lacibacter 0.00 1 1 S 2760713 Lacibacter sediminis 0.00 1 0 G 398041 Flavisolibacter 0.00 1 1 S 661481 Flavisolibacter ginsenosidimutans 0.04 20 0 C 200643 Bacteroidia 0.02 11 0 O 1970189 Marinilabiliales 0.02 11 4 F 1471398 Prolixibacteraceae 0.01 6 0 G 2792393 Aquipluma 0.01 6 6 S 2010828 Aquipluma nitroreducens 0.00 1 0 G 1471399 Draconibacterium 0.00 1 0 G1 1573822 environmental samples 0.00 1 1 S 1573823 uncultured Draconibacterium sp. 0.02 9 0 O 171549 Bacteroidales 0.01 4 0 F 171551 Porphyromonadaceae 0.01 4 0 G 1159323 Macellibacteroides 0.01 4 0 G1 1243006 environmental samples 0.01 4 4 S 1243007 uncultured Macellibacteroides sp. 0.00 2 0 F 171552 Prevotellaceae 0.00 2 0 G 838 Prevotella 0.00 2 2 S 2801997 Prevotella herbatica 0.00 2 0 F 2005523 Paludibacteraceae 0.00 2 0 G 346096 Paludibacter 0.00 2 0 S 185300 Paludibacter propionicigenes 0.00 2 2 S1 694427 Paludibacter propionicigenes WB4 0.00 1 0 F 815 Bacteroidaceae 0.00 1 0 G 816 Bacteroides 0.00 1 1 S 818 Bacteroides thetaiotaomicron 0.01 4 0 P 1936987 Balneolota 0.01 4 0 C 1853221 Balneolia 0.01 4 0 O 1853223 Balneolales 0.01 4 0 F 3024158 Cyclonatronaceae 0.01 4 0 G 2489367 Cyclonatronum 0.01 4 4 S 1457365 Cyclonatronum proteinivorum 0.01 3 0 P 1134404 Ignavibacteriota 0.01 3 0 C 795747 Ignavibacteria 0.01 3 0 O 795748 Ignavibacteriales 0.01 3 0 F 1334117 Melioribacteraceae 0.01 3 0 G 1134403 Melioribacter 0.01 3 0 S 1134405 Melioribacter roseus 0.01 3 3 S1 1191523 Melioribacter roseus P3M-2 0.01 3 0 P 142182 Gemmatimonadota 0.01 3 0 C 219685 Gemmatimonadia 0.01 3 0 O 219686 Gemmatimonadales 0.01 3 0 F 219687 Gemmatimonadaceae 0.01 3 1 G 173479 Gemmatimonas 0.00 1 1 S 1379270 Gemmatimonas phototrophica 0.00 1 1 S 2732249 Gemmatimonas groenlandica 0.00 1 0 P 65842 Fibrobacterota 0.00 1 0 C 204430 Fibrobacteria 0.00 1 0 O 218872 Fibrobacterales 0.00 1 0 F 204431 Fibrobacteraceae 0.00 1 0 G 832 Fibrobacter 0.00 1 0 S 833 Fibrobacter succinogenes 0.00 1 0 S1 834 Fibrobacter succinogenes subsp. succinogenes 0.00 1 1 S2 59374 Fibrobacter succinogenes subsp. succinogenes S85 0.00 1 0 P 456828 Candidatus Cloacimonadota 0.00 1 0 C 3039863 Candidatus Cloacimonadia 0.00 1 0 O 3039864 Candidatus Cloacimonadales 0.00 1 0 F 3039865 Candidatus Cloacimonadaceae 0.00 1 0 G 456826 Candidatus Cloacimonas 0.00 1 0 S 456827 Candidatus Cloacimonas acidaminovorans 0.00 1 1 S1 459349 Candidatus Cloacimonas acidaminovorans str. Evry 1.63 844 4 D1 1783272 Terrabacteria group 1.20 624 1 P 1239 Bacillota 1.12 579 1 C 91061 Bacilli 1.07 556 14 O 1385 Bacillales 0.51 265 6 F 186822 Paenibacillaceae 0.47 241 108 G 44249 Paenibacillus 0.16 83 2 G1 185978 unclassified Paenibacillus 0.13 69 69 S 1306526 Paenibacillus sp. HWE-109 0.01 6 6 S 715179 Paenibacillus sp. sptzw28 0.01 3 3 S 2211212 Paenibacillus sp. DCT19 0.00 1 1 S 2921654 Paenibacillus sp. FSL R5-0701 0.00 1 1 S 1906272 Paenibacillus sp. JZ16 0.00 1 1 S 2996034 Paenibacillus sp. SYP-B4298 0.03 15 15 S 2918900 Paenibacillus aurantius 0.01 5 5 S 1406 Paenibacillus polymyxa 0.01 5 5 S 162209 Paenibacillus naphthalenovorans 0.01 4 4 S 1712516 Paenibacillus baekrokdamisoli 0.01 4 4 S 2704463 Paenibacillus rhizovicinus 0.01 3 3 S 3050112 Paenibacillus polygoni 0.01 3 3 S 1778678 Paenibacillus psychroresistens 0.00 2 2 S 1178515 Paenibacillus swuensis 0.00 1 1 S 61624 Paenibacillus mucilaginosus 0.00 1 1 S 682956 Paenibacillus jilunlii 0.00 1 1 S 130049 Paenibacillus dendritiformis 0.00 1 1 S 49283 Paenibacillus thiaminolyticus 0.00 1 1 S 562959 Paenibacillus cellulositrophicus 0.00 1 1 S 2975482 Paenibacillus andongensis 0.00 1 1 S 2020716 Paenibacillus konkukensis 0.00 1 1 S 521520 Paenibacillus urinalis 0.00 1 1 S 44250 Paenibacillus alvei 0.02 11 1 G 329857 Cohnella 0.02 9 9 S 2674991 Cohnella candidum 0.00 1 0 G1 2636738 unclassified Cohnella 0.00 1 1 S 1619153 Cohnella sp. LGH 0.01 6 5 G 55080 Brevibacillus 0.00 1 1 S 45462 Brevibacillus borstelensis 0.00 1 0 F1 85151 Aneurinibacillus group 0.00 1 1 G 55079 Aneurinibacillus 0.32 166 5 F 186817 Bacillaceae 0.19 97 51 G 150247 Anoxybacillus 0.08 44 0 S 33934 Anoxybacillus flavithermus 0.08 44 44 S1 491915 Anoxybacillus flavithermus WK1 0.00 2 2 G1 2639704 unclassified Anoxybacillus 0.06 30 1 G 1386 Bacillus 0.04 21 3 G1 653685 Bacillus subtilis group 0.03 13 0 G2 1938374 Bacillus amyloliquefaciens group 0.02 11 11 S 492670 Bacillus velezensis 0.00 2 2 S 1390 Bacillus amyloliquefaciens 0.01 3 3 S 1423 Bacillus subtilis 0.00 1 1 S 1452 Bacillus atrophaeus 0.00 1 0 G2 653388 Bacillus mojavensis subgroup 0.00 1 1 S 260554 Bacillus halotolerans 0.01 6 0 G1 86661 Bacillus cereus group 0.01 3 3 S 1392 Bacillus anthracis 0.00 2 2 S 1428 Bacillus thuringiensis 0.00 1 1 S 1396 Bacillus cereus 0.00 1 1 S 2672567 Bacillus aquiflavi 0.00 1 1 S 561879 Bacillus safensis 0.05 26 26 G 129337 Geobacillus 0.01 5 0 G 400634 Lysinibacillus 0.01 3 3 S 28031 Lysinibacillus fusiformis 0.00 1 1 S 2086577 Lysinibacillus timonensis 0.00 1 0 G1 2636778 unclassified Lysinibacillus 0.00 1 1 S 2954544 Lysinibacillus sp. FSL W7-1291 0.00 1 0 G 29331 Amphibacillus 0.00 1 0 S 1449 Amphibacillus xylanus 0.00 1 1 S1 698758 Amphibacillus xylanus NBRC 15112 0.00 1 0 G 2837506 Niallia 0.00 1 1 S 1397 Niallia circulans 0.00 1 0 G 2675229 Peribacillus 0.00 1 1 S 228899 Peribacillus asahii 0.11 55 0 F 186823 Alicyclobacillaceae 0.11 55 1 G 29330 Alicyclobacillus 0.06 33 33 S 2931921 Alicyclobacillus mengziensis 0.03 17 0 G1 2622400 unclassified Alicyclobacillus 0.02 11 11 S 2796143 Alicyclobacillus sp. ALC3 0.01 4 4 S 2606450 Alicyclobacillus sp. TC 0.00 2 2 S 2665646 Alicyclobacillus sp. SO9 0.01 3 3 S 1457 Alicyclobacillus cycloheptanicus 0.00 1 1 S 1475485 Alicyclobacillus dauci 0.05 25 0 F 186821 Sporolactobacillaceae 0.05 25 0 G 475230 Pullulanibacillus 0.05 25 0 G1 2640606 unclassified Pullulanibacillus 0.05 25 25 S 3028315 Pullulanibacillus sp. KACC 23026 0.04 21 0 F 90964 Staphylococcaceae 0.04 21 1 G 1279 Staphylococcus 0.03 16 16 S 1280 Staphylococcus aureus 0.00 2 2 S 70255 Staphylococcus condimenti 0.00 2 2 S 1283 Staphylococcus haemolyticus 0.02 8 0 F 186820 Listeriaceae 0.02 8 7 G 1637 Listeria 0.00 1 1 S 1639 Listeria monocytogenes 0.00 1 0 F 186818 Planococcaceae 0.00 1 0 G 1372 Planococcus 0.00 1 1 S 192421 Planococcus maritimus 0.00 1 0 O1 539002 Bacillales incertae sedis 0.00 1 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.00 1 1 G 33986 Exiguobacterium 0.04 22 0 O 186826 Lactobacillales 0.03 18 0 F 81852 Enterococcaceae 0.03 17 0 G 1350 Enterococcus 0.03 17 17 S 1351 Enterococcus faecalis 0.00 1 0 G 51668 Tetragenococcus 0.00 1 1 S 51669 Tetragenococcus halophilus 0.01 4 0 F 33958 Lactobacillaceae 0.00 1 1 G 46254 Oenococcus 0.00 1 1 G 1243 Leuconostoc 0.00 1 0 G 2759736 Lacticaseibacillus 0.00 1 1 S 1597 Lacticaseibacillus paracasei 0.00 1 0 G 2767874 Acetilactobacillus 0.00 1 1 S 1720083 Acetilactobacillus jinshanensis 0.07 38 1 C 186801 Clostridia 0.04 22 1 O 186802 Eubacteriales 0.02 12 1 F 31979 Clostridiaceae 0.02 10 5 G 1485 Clostridium 0.00 1 1 S 1491 Clostridium botulinum 0.00 1 1 S 46867 Clostridium chauvoei 0.00 1 1 S 1520 Clostridium beijerinckii 0.00 1 1 S 1502 Clostridium perfringens 0.00 1 1 S 1716543 Clostridium thermarum 0.00 1 0 G 1848399 Crassaminicella 0.00 1 1 S 2855394 Crassaminicella indica 0.01 4 0 F 216572 Oscillospiraceae 0.00 2 0 G 1263 Ruminococcus 0.00 1 1 S 1161942 Ruminococcus champanellensis 0.00 1 1 G1 2608920 unclassified Ruminococcus 0.00 1 0 G 236752 Fastidiosipila 0.00 1 1 S 236753 Fastidiosipila sanguinis 0.00 1 1 G 2834348 Caproicibacterium 0.00 2 0 F 186807 Peptococcaceae 0.00 2 2 G 2916693 Desulforamulus 0.00 1 1 F 31984 Heliobacteriaceae 0.00 1 0 F 3085642 Butyricicoccaceae 0.00 1 0 G 2048137 Agathobaculum 0.00 1 0 G1 2620324 unclassified Agathobaculum 0.00 1 1 S 3079302 Agathobaculum sp. NTUH-O15-33 0.00 1 0 F 3046368 Aristaeellaceae 0.00 1 0 G 3046369 Aristaeella 0.00 1 1 S 3046382 Aristaeella hokkaidonensis 0.02 8 0 O 3082720 Peptostreptococcales 0.01 3 0 F 3118655 Filifactoraceae 0.01 3 0 G 186831 Acetoanaerobium 0.01 3 3 S 1511 Acetoanaerobium sticklandii 0.00 2 0 F 186804 Peptostreptococcaceae 0.00 1 0 G 1257 Peptostreptococcus 0.00 1 1 S 3003601 Peptostreptococcus equinus 0.00 1 0 G 1501226 Romboutsia 0.00 1 0 G1 2626894 unclassified Romboutsia 0.00 1 1 S 2708053 Romboutsia sp. 13368 0.00 2 0 F 3030910 Anaerovoracaceae 0.00 2 0 G 2060094 Aminipila 0.00 1 1 S 433296 Aminipila butyrica 0.00 1 1 S 2507160 Aminipila luticellarii 0.00 1 0 F 3118656 Natronincolaceae 0.00 1 0 G 114627 Alkaliphilus 0.00 1 0 S 208226 Alkaliphilus metalliredigens 0.00 1 1 S1 293826 Alkaliphilus metalliredigens QYMF 0.01 5 0 O 3085636 Lachnospirales 0.01 5 1 F 186803 Lachnospiraceae 0.00 2 0 G 2316020 Mediterraneibacter 0.00 2 2 S 33038 Mediterraneibacter gnavus 0.00 1 0 G 2163168 Kineothrix 0.00 1 0 G1 2625420 unclassified Kineothrix 0.00 1 1 S 3070215 Kineothrix sp. MB12-C1 0.00 1 0 G 207244 Anaerostipes 0.00 1 0 G1 2635253 unclassified Anaerostipes 0.00 1 1 S 3036926 Anaerostipes sp. PC18 0.00 1 0 O 53433 Halanaerobiales 0.00 1 1 F 972 Halanaerobiaceae 0.00 1 0 O 3039167 Moorellales 0.00 1 0 F 2748673 Zhaonellaceae 0.00 1 0 G 2748674 Zhaonella 0.00 1 1 S 2528593 Zhaonella formicivorans 0.01 3 0 C 909932 Negativicutes 0.00 2 0 O 909929 Selenomonadales 0.00 2 0 F 1843490 Sporomusaceae 0.00 2 2 G 2375 Sporomusa 0.00 1 0 O 1843488 Acidaminococcales 0.00 1 0 F 909930 Acidaminococcaceae 0.00 1 1 G 904 Acidaminococcus 0.00 2 0 C 1737404 Tissierellia 0.00 1 0 O 1737405 Tissierellales 0.00 1 0 F 1737406 Tissierellaceae 0.00 1 0 G 2692382 Gudongella 0.00 1 1 S 1582259 Gudongella oleilytica 0.00 1 0 C1 1737407 Tissierellia incertae sedis 0.00 1 0 G 190972 Sedimentibacter 0.00 1 1 G1 2649220 unclassified Sedimentibacter 0.00 1 0 P1 2840488 Bacillota incertae sedis 0.00 1 0 O 3071001 Caldicellulosiruptorales 0.00 1 0 F 3071002 Caldicellulosiruptoraceae 0.00 1 0 G 44000 Caldicellulosiruptor 0.00 1 1 S 29324 Caldicellulosiruptor naganoensis 0.33 173 1 P 201174 Actinomycetota 0.29 152 2 C 1760 Actinomycetes 0.14 74 3 O 85006 Micrococcales 0.11 59 41 F 85023 Microbacteriaceae 0.01 7 7 G 1705353 Aurantimicrobium 0.01 3 3 G 33882 Microbacterium 0.00 2 1 G 55968 Leucobacter 0.00 1 1 S 1784719 Leucobacter triazinivorans 0.00 1 0 G 2034 Curtobacterium 0.00 1 0 G1 257496 unclassified Curtobacterium 0.00 1 1 S 2175655 Curtobacterium sp. MCPF17_052 0.00 1 0 G 1195526 Gryllotalpicola 0.00 1 1 S 2419771 Gryllotalpicola protaetiae 0.00 1 0 F1 1655488 Luna cluster 0.00 1 0 F2 1655489 Luna-1 subcluster 0.00 1 0 G 529883 Rhodoluna 0.00 1 1 S 535712 Candidatus Rhodoluna planktonica 0.00 1 0 G 1857011 Lysinibacter 0.00 1 0 G1 2619652 unclassified Lysinibacter 0.00 1 1 S 3031408 Lysinibacter sp. HNR 0.00 1 0 G 2680004 Protaetiibacter 0.00 1 1 S 2592654 Protaetiibacter larvae 0.00 1 0 G 3108736 Antiquaquibacter 0.00 1 1 S 2880260 Antiquaquibacter oligotrophicus 0.02 11 0 F 145357 Dermacoccaceae 0.02 11 0 G 908935 Yimella 0.02 11 0 G1 2649892 unclassified Yimella 0.02 11 11 S 2770551 Yimella sp. cx-51 0.00 1 0 F 1268 Micrococcaceae 0.00 1 0 G 1663 Arthrobacter 0.00 1 0 G1 235627 unclassified Arthrobacter 0.00 1 1 S 2830998 Arthrobacter sp. NicSoilB8 0.10 50 1 O 85007 Mycobacteriales 0.04 19 0 F 85026 Gordoniaceae 0.04 19 19 G 2053 Gordonia 0.03 15 0 F 1653 Corynebacteriaceae 0.03 15 6 G 1716 Corynebacterium 0.02 8 8 S 679663 Corynebacterium canis 0.00 1 0 S 203263 Corynebacterium aquilae 0.00 1 1 S1 1431546 Corynebacterium aquilae DSM 44791 0.03 14 12 F 1762 Mycobacteriaceae 0.00 1 0 G 1763 Mycobacterium 0.00 1 0 G1 77643 Mycobacterium tuberculosis complex 0.00 1 1 S 1773 Mycobacterium tuberculosis 0.00 1 1 G 1866885 Mycolicibacterium 0.00 1 0 F 85025 Nocardiaceae 0.00 1 0 G 1817 Nocardia 0.00 1 1 S 37326 Nocardia brasiliensis 0.02 11 0 O 85009 Propionibacteriales 0.02 9 7 F 31957 Propionibacteriaceae 0.00 1 0 G 1743 Propionibacterium 0.00 1 1 S 1744 Propionibacterium freudenreichii 0.00 1 0 G 1912216 Cutibacterium 0.00 1 1 S 1747 Cutibacterium acnes 0.00 2 0 F 85015 Nocardioidaceae 0.00 1 0 G 1839 Nocardioides 0.00 1 1 S 1542737 Nocardioides marmorisolisilvae 0.00 1 0 G 116071 Micropruina 0.00 1 1 S 75385 Micropruina glycogenica 0.02 8 0 O 85011 Kitasatosporales 0.02 8 0 F 2062 Streptomycetaceae 0.02 8 1 G 1883 Streptomyces 0.01 6 0 G1 2839105 Streptomyces violaceusniger group 0.01 6 6 S 1226757 Streptomyces rapamycinicus 0.00 1 0 G1 2593676 unclassified Streptomyces 0.00 1 1 S 2750025 Streptomyces sp. CB00271 0.01 3 0 O 85004 Bifidobacteriales 0.01 3 0 F 31953 Bifidobacteriaceae 0.01 3 1 G 1678 Bifidobacterium 0.00 2 0 S 216816 Bifidobacterium longum 0.00 2 2 S1 1679 Bifidobacterium longum subsp. longum 0.01 3 0 O 2039638 Candidatus Nanopelagicales 0.01 3 0 F 2162846 Candidatus Nanopelagicaceae 0.00 2 1 G 2039639 Candidatus Nanopelagicus 0.00 1 1 S 1884915 Candidatus Nanopelagicus hibericus 0.00 1 0 G 622681 Candidatus Planktophila 0.00 1 1 S 1884907 Candidatus Planktophila vernalis 0.00 1 0 O 2805415 Jatrophihabitantales 0.00 1 0 F 2805416 Jatrophihabitantaceae 0.00 1 1 G 1434010 Jatrophihabitans 0.02 12 0 C 84992 Acidimicrobiia 0.02 12 0 O 84993 Acidimicrobiales 0.01 7 0 F 2448023 Ilumatobacteraceae 0.01 7 0 G 682522 Ilumatobacter 0.01 7 0 S 467094 Ilumatobacter coccineus 0.01 7 7 S1 1313172 Ilumatobacter coccineus YM16-304 0.01 5 0 F 633392 Iamiaceae 0.00 2 0 G 2789775 Actinomarinicola 0.00 2 2 S 2789776 Actinomarinicola tropica 0.00 2 0 G 3075137 Dermatobacter 0.00 2 2 S 2884263 Dermatobacter hominis 0.00 1 0 G 1648491 Aquihabitans 0.00 1 0 G1 2633173 unclassified Aquihabitans 0.00 1 1 S 2849779 Aquihabitans sp. G128 0.01 5 0 C 84998 Coriobacteriia 0.01 4 0 O 1643822 Eggerthellales 0.01 4 1 F 1643826 Eggerthellaceae 0.00 1 0 G 79603 Denitrobacterium 0.00 1 1 S 79604 Denitrobacterium detoxificans 0.00 1 0 G 84111 Eggerthella 0.00 1 1 S 84112 Eggerthella lenta 0.00 1 0 G 1926677 Raoultibacter 0.00 1 1 S 1907662 Raoultibacter timonensis 0.00 1 0 O 84999 Coriobacteriales 0.00 1 0 F 1643824 Atopobiaceae 0.00 1 0 G 1380 Atopobium 0.00 1 0 G1 2643817 unclassified Atopobium 0.00 1 1 S 712157 Atopobium sp. oral taxon 416 0.00 2 0 C 1497346 Thermoleophilia 0.00 2 0 O 588673 Solirubrobacterales 0.00 1 0 F 2600303 Baekduiaceae 0.00 1 1 G 2600304 Baekduia 0.00 1 0 F 2758916 Paraconexibacteraceae 0.00 1 1 G 2758920 Paraconexibacter 0.00 1 0 C 908620 Nitriliruptoria 0.00 1 0 O 908621 Euzebyales 0.00 1 0 F 908622 Euzebyaceae 0.00 1 0 G 908623 Euzebya 0.00 1 1 S 1608957 Euzebya pacifica 0.05 27 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.05 27 0 P 1117 Cyanobacteriota 0.05 27 0 C 3028117 Cyanophyceae 0.03 16 0 O 3079749 Leptolyngbyales 0.03 16 0 F 1890438 Leptolyngbyaceae 0.03 16 0 F1 3081713 Leptolyngbya group 0.03 16 0 G 47251 Leptolyngbya 0.03 14 0 G1 2650499 unclassified Leptolyngbya 0.03 13 13 S 2812896 Leptolyngbya sp. 7M 0.00 1 1 S 1080068 Leptolyngbya sp. O-77 0.00 2 2 S 1184 Leptolyngbya boryana 0.01 6 0 O 1890424 Synechococcales 0.01 4 0 F 2881426 Prochlorococcaceae 0.01 4 0 G 167375 Cyanobium 0.01 3 0 S 2304190 Cyanobium usitatum 0.01 3 3 S1 2116684 Cyanobium usitatum str. Tous 0.00 1 0 S 59930 Cyanobium gracile 0.00 1 1 S1 292564 Cyanobium gracile PCC 6307 0.00 2 0 F 1890426 Synechococcaceae 0.00 2 0 G 1129 Synechococcus 0.00 2 1 G1 2626047 unclassified Synechococcus 0.00 1 1 S 1353136 Synechococcus sp. CBW1004 0.01 3 0 C1 1301283 Oscillatoriophycideae 0.00 2 0 O 1150 Oscillatoriales 0.00 1 0 F 1892254 Oscillatoriaceae 0.00 1 0 G 1158 Oscillatoria 0.00 1 0 S 482564 Oscillatoria nigro-viridis 0.00 1 1 S1 179408 Oscillatoria nigro-viridis PCC 7112 0.00 1 0 O1 1892256 Oscillatoriales incertae sedis 0.00 1 0 G 2023214 Koinonema 0.00 1 0 G1 2781947 unclassified Koinonema 0.00 1 1 S 222819 [Phormidium] sp. ETS-05 0.00 1 0 O 1118 Chroococcales 0.00 1 0 F 2815910 Geminocystaceae 0.00 1 0 G 669357 Geminocystis 0.00 1 0 G1 2625037 unclassified Geminocystis 0.00 1 1 S 1617448 Geminocystis sp. NIES-3709 0.00 2 0 O 1161 Nostocales 0.00 2 0 F 1162 Nostocaceae 0.00 2 0 G 1177 Nostoc 0.00 2 2 G1 2593658 unclassified Nostoc 0.02 9 0 P 200795 Chloroflexota 0.01 6 0 C 292625 Anaerolineae 0.01 6 0 O 292629 Anaerolineales 0.01 6 0 F 292628 Anaerolineaceae 0.01 5 0 G 1649478 Pelolinea 0.01 5 5 S 913107 Pelolinea submarina 0.00 1 0 G 2019482 Brevefilum 0.00 1 1 S 1986204 Brevefilum fermentans 0.00 1 0 C 32061 Chloroflexia 0.00 1 0 O 32064 Chloroflexales 0.00 1 0 O1 1508594 Chloroflexineae 0.00 1 0 F 1106 Chloroflexaceae 0.00 1 0 G 1107 Chloroflexus 0.00 1 0 S 152260 Chloroflexus aggregans 0.00 1 1 S1 326427 Chloroflexus aggregans DSM 9485 0.00 1 0 C 475962 Caldilineae 0.00 1 0 O 475963 Caldilineales 0.00 1 0 F 475964 Caldilineaceae 0.00 1 0 G 233191 Caldilinea 0.00 1 0 S 133453 Caldilinea aerophila 0.00 1 1 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.00 1 0 C 2682225 Tepidiformia 0.00 1 0 O 2682226 Tepidiformales 0.00 1 0 F 2682227 Tepidiformaceae 0.00 1 1 G 2682228 Tepidiforma 0.01 5 0 P 1297 Deinococcota 0.01 5 0 C 188787 Deinococci 0.01 4 0 O 68933 Thermales 0.01 4 0 F 188786 Thermaceae 0.00 1 0 G 270 Thermus 0.00 1 0 S 37636 Thermus scotoductus 0.00 1 1 S1 743525 Thermus scotoductus SA-01 0.00 1 1 G 65551 Meiothermus 0.00 1 0 G 208447 Oceanithermus 0.00 1 0 S 187137 Oceanithermus profundus 0.00 1 1 S1 670487 Oceanithermus profundus DSM 14977 0.00 1 0 G 2935559 Allomeiothermus 0.00 1 0 S 52022 Allomeiothermus silvanus 0.00 1 1 S1 526227 Allomeiothermus silvanus DSM 9946 0.00 1 0 O 2762275 Trueperales 0.00 1 0 F 332247 Trueperaceae 0.00 1 0 G 332248 Truepera 0.00 1 1 S 332249 Truepera radiovictrix 0.00 2 0 P 544448 Mycoplasmatota 0.00 2 0 C 31969 Mollicutes 0.00 2 0 O 186328 Entomoplasmatales 0.00 2 0 F 2131 Spiroplasmataceae 0.00 2 0 G 2132 Spiroplasma 0.00 2 0 G1 2637901 unclassified Spiroplasma 0.00 1 1 S 3077930 Spiroplasma endosymbiont of Agriotes lineatus 0.00 1 1 S 3066281 Spiroplasma endosymbiont of Asaphidion curtum 0.84 437 0 D1 1783257 PVC group 0.57 296 8 P 74201 Verrucomicrobiota 0.52 269 3 C 203494 Verrucomicrobiia 0.38 195 0 O 134621 Limisphaerales 0.38 195 0 F 3050006 Fontisphaeraceae 0.38 195 0 G 3050007 Fontisphaera 0.38 195 195 S 2974023 Fontisphaera persica 0.14 71 2 O 48461 Verrucomicrobiales 0.13 69 0 F 203557 Verrucomicrobiaceae 0.07 35 0 G 1348508 Roseimicrobium 0.07 35 0 G1 2711230 unclassified Roseimicrobium 0.07 35 35 S 2711231 Roseimicrobium sp. ORNL1 0.05 26 2 G 518753 Luteolibacter 0.03 17 0 G1 2637149 unclassified Luteolibacter 0.03 17 17 S 2995170 Luteolibacter sp. SL250 0.01 7 7 S 2728835 Luteolibacter luteus 0.02 8 0 G 2735 Verrucomicrobium 0.01 4 0 S 2736 Verrucomicrobium spinosum 0.01 4 4 S1 240016 Verrucomicrobium spinosum DSM 4136 = JCM 18804 0.01 4 0 G1 2625155 unclassified Verrucomicrobium 0.01 4 4 S 1882831 Verrucomicrobium sp. GAS474 0.03 17 0 C 414999 Opitutia 0.03 15 0 O 415000 Opitutales 0.03 15 13 F 134623 Opitutaceae 0.00 2 0 G 2576890 Nibricoccus 0.00 2 2 S 2576891 Nibricoccus aquaticus 0.00 2 0 O 415001 Puniceicoccales 0.00 2 0 F 3056374 Cerasicoccaceae 0.00 1 0 G 2175957 Ruficoccus 0.00 1 0 G1 2621336 unclassified Ruficoccus 0.00 1 1 S 2866311 Ruficoccus sp. ZRK36 0.00 1 0 G 3138622 Rubellicoccus 0.00 1 1 S 3080537 Rubellicoccus peritrichatus 0.00 1 0 C 134549 Spartobacteria 0.00 1 0 G 134550 Candidatus Xiphinematobacter 0.00 1 0 G1 2648876 unclassified Candidatus Xiphinematobacter 0.00 1 1 S 1704307 Candidatus Xiphinematobacter sp. Idaho Grape 0.00 1 0 C 1955630 Methylacidiphilae 0.00 1 0 O 717963 Methylacidiphilales 0.00 1 0 F 717964 Methylacidiphilaceae 0.00 1 1 G 511745 Methylacidiphilum (ex Ratnadevi et al. 2023) 0.25 127 5 P 203682 Planctomycetota 0.19 100 1 C 203683 Planctomycetia 0.14 72 1 O 2691354 Pirellulales 0.13 69 3 F 2691357 Pirellulaceae 0.11 57 0 G 265487 Blastopirellula 0.11 57 0 G1 2647022 unclassified Blastopirellula 0.11 57 57 S 2943192 Blastopirellula sp. J2-11 0.01 5 0 G 123 Pirellula 0.01 3 0 G1 2639138 unclassified Pirellula 0.01 3 3 S 1632865 Pirellula sp. SH-Sr6A 0.00 2 0 S 125 Pirellula staleyi 0.00 2 2 S1 530564 Pirellula staleyi DSM 6068 0.00 1 0 G 2005380 Mariniblastus 0.00 1 1 S 980251 Mariniblastus fucicola 0.00 1 0 G 2795605 Aureliella 0.00 1 1 S 2527968 Aureliella helgolandensis 0.00 1 0 G 2795775 Lignipirellula 0.00 1 1 S 2528010 Lignipirellula cremea 0.00 1 1 G 2795973 Stieleria 0.00 2 0 F 2691359 Lacipirellulaceae 0.00 1 0 G 1400386 Bythopirellula 0.00 1 1 S 1400387 Bythopirellula goksoeyrii 0.00 1 0 G 2795783 Pirellulimonas 0.00 1 1 S 2528009 Pirellulimonas nuda 0.03 15 0 O 112 Planctomycetales 0.03 15 0 F 126 Planctomycetaceae 0.02 8 0 G 118 Planctomyces 0.02 8 0 G1 2648843 unclassified Planctomyces 0.01 7 7 S 1632864 Planctomyces sp. SH-PL14 0.00 1 1 S 1636152 Planctomyces sp. SH-PL62 0.01 3 1 G 1649480 Planctopirus 0.00 2 2 S 2528019 Planctopirus ephydatiae 0.00 2 0 G 2795780 Symmachiella 0.00 2 2 S 2527995 Symmachiella dynata 0.00 1 0 G 1936111 Fuerstiella 0.00 1 1 S 1891926 Fuerstiella marisgermanici 0.00 1 0 G 2795777 Maioricimonas 0.00 1 1 S 2528026 Maioricimonas rarisocia 0.01 6 0 O 2691355 Gemmatales 0.01 6 0 F 1914233 Gemmataceae 0.01 3 0 G 2731450 Limnoglobus 0.01 3 3 S 2598579 Limnoglobus roseus 0.01 3 0 G 2807415 Urbifossiella 0.01 3 3 S 2528023 Urbifossiella limnaea 0.01 6 0 O 2691356 Isosphaerales 0.01 6 0 F 1763524 Isosphaeraceae 0.00 2 0 G 466152 Singulisphaera 0.00 2 0 S 466153 Singulisphaera acidiphila 0.00 2 2 S1 886293 Singulisphaera acidiphila DSM 18658 0.00 2 0 G 1511635 Aquisphaera 0.00 2 2 S 406548 Aquisphaera giovannonii 0.00 1 0 G 1763521 Paludisphaera 0.00 1 1 S 1387353 Paludisphaera borealis 0.00 1 0 G 2680020 Tautonia 0.00 1 1 S 2527974 Tautonia plasticadhaerens 0.04 22 0 C 666505 Phycisphaerae 0.04 21 0 O 666506 Phycisphaerales 0.04 21 0 F 666507 Phycisphaeraceae 0.04 20 0 G 666508 Phycisphaera 0.04 20 0 S 547188 Phycisphaera mikurensis 0.04 20 20 S1 1142394 Phycisphaera mikurensis NBRC 102666 0.00 1 0 G 2913022 Mucisphaera 0.00 1 1 S 2527982 Mucisphaera calidilacus 0.00 1 0 O 2483366 Sedimentisphaerales 0.00 1 0 F 2690158 Anaerohalosphaeraceae 0.00 1 0 G 2690159 Anaerohalosphaera 0.00 1 1 S 1936003 Anaerohalosphaera lusitana 0.03 14 0 P 204428 Chlamydiota 0.03 14 0 C 204429 Chlamydiia 0.03 13 0 O 1963360 Parachlamydiales 0.02 11 0 F 92713 Parachlamydiaceae 0.01 5 0 G 83551 Parachlamydia 0.01 5 0 S 83552 Parachlamydia acanthamoebae 0.01 5 5 S1 765952 Parachlamydia acanthamoebae UV-7 0.01 4 0 G 112987 Neochlamydia 0.01 4 0 G1 2643326 unclassified Neochlamydia 0.01 4 4 S 1353976 Neochlamydia sp. S13 0.00 2 0 G 282132 Candidatus Protochlamydia 0.00 2 2 S 389348 Candidatus Protochlamydia naegleriophila 0.00 2 0 F 92714 Waddliaceae 0.00 2 0 G 71666 Waddlia 0.00 2 0 S 71667 Waddlia chondrophila 0.00 2 2 S1 716544 Waddlia chondrophila WSU 86-1044 0.00 1 0 O 51291 Chlamydiales 0.00 1 0 F 809 Chlamydiaceae 0.00 1 0 F1 1113537 Chlamydia/Chlamydophila group 0.00 1 0 G 810 Chlamydia 0.00 1 1 S 83559 Chlamydia suis 0.72 375 0 P 57723 Acidobacteriota 0.71 367 0 C 204432 Terriglobia 0.65 338 0 O 204433 Terriglobales 0.64 334 70 F 204434 Acidobacteriaceae 0.49 252 2 G 392733 Terriglobus 0.47 246 1 S 392734 Terriglobus roseus 0.47 245 245 S1 926566 Terriglobus roseus DSM 18391 0.01 4 0 S 870903 Terriglobus saanensis 0.01 4 4 S1 401053 Terriglobus saanensis SP1PR4 0.01 5 0 G 1742983 Occallatibacter 0.01 5 5 S 1002689 Occallatibacter riparius 0.01 3 0 G 940557 Granulicella 0.01 3 0 G1 2621151 unclassified Granulicella 0.00 2 2 S 1617967 Granulicella sp. 5B5 0.00 1 1 S 2602070 Granulicella sp. WH15 0.00 2 0 G 33973 Acidobacterium 0.00 2 0 S 33075 Acidobacterium capsulatum 0.00 2 2 S1 240015 Acidobacterium capsulatum ATCC 51196 0.00 1 0 G 388463 Edaphobacter 0.00 1 1 G1 2637509 unclassified Edaphobacter 0.00 1 0 G 2608728 Acidisarcina 0.00 1 1 S 2211140 Acidisarcina polymorpha 0.01 4 0 F 3121618 Candidatus Korobacteraceae 0.01 4 0 G 658061 Candidatus Korobacter 0.01 4 0 S 658062 Candidatus Korobacter versatilis 0.01 4 4 S1 204669 Candidatus Koribacter versatilis Ellin345 0.06 29 0 O 332160 Bryobacterales 0.06 29 0 F 1962910 Bryobacteraceae 0.06 29 29 G 1649475 Paludibaculum 0.01 5 0 C 533205 Holophagae 0.01 4 0 O 574975 Holophagales 0.01 4 1 F 574976 Holophagaceae 0.01 3 2 G 44675 Geothrix 0.00 1 1 G1 2647902 unclassified Geothrix 0.00 1 0 O 2562243 Thermotomaculales 0.00 1 0 F 2562244 Thermotomaculaceae 0.00 1 0 G 1172428 Thermotomaculum 0.00 1 1 S 981385 Thermotomaculum hydrothermale 0.01 3 0 C 1813735 Vicinamibacteria 0.01 3 0 O 2910145 Vicinamibacterales 0.01 3 0 F 2211325 Vicinamibacteraceae 0.01 3 2 G 2004797 Luteitalea 0.00 1 0 G1 2626009 unclassified Luteitalea 0.00 1 1 S 2802971 Luteitalea sp. TBR-22 0.04 22 0 P 200940 Thermodesulfobacteriota 0.02 11 0 C 3031651 Desulfuromonadia 0.02 8 0 O 3031668 Geobacterales 0.02 8 1 F 213422 Geobacteraceae 0.01 6 0 G 115782 Trichlorobacter 0.01 6 6 S 313985 Trichlorobacter lovleyi 0.00 1 0 G 2651583 Geomonas 0.00 1 0 G1 2860296 unclassified Geomonas 0.00 1 1 S 2897342 Geomonas sp. RF6 0.01 3 0 O 69541 Desulfuromonadales 0.01 3 0 F 213421 Desulfuromonadaceae 0.01 3 0 G 890 Desulfuromonas 0.00 2 0 G1 2614637 unclassified Desulfuromonas 0.00 2 2 S 1823759 Desulfuromonas sp. DDH964 0.00 1 1 S 1603606 Desulfuromonas soudanensis 0.01 6 0 C 3031449 Desulfovibrionia 0.01 6 0 O 213115 Desulfovibrionales 0.01 4 0 F 194924 Desulfovibrionaceae 0.00 2 0 G 872 Desulfovibrio 0.00 2 2 S 876 Desulfovibrio desulfuricans 0.00 1 0 G 2794998 Maridesulfovibrio 0.00 1 0 G1 2794999 unclassified Maridesulfovibrio 0.00 1 1 S 2795000 Maridesulfovibrio sp. 0.00 1 0 G 2910984 Solidesulfovibrio 0.00 1 0 S 345370 Solidesulfovibrio carbinoliphilus 0.00 1 1 S1 694327 Solidesulfovibrio carbinoliphilus subsp. oakridgensis 0.00 2 0 F 213116 Desulfomicrobiaceae 0.00 2 2 G 898 Desulfomicrobium 0.01 3 0 C 3031451 Desulfobulbia 0.01 3 0 O 3024411 Desulfobulbales 0.00 2 0 F 2886822 Desulfocapsaceae 0.00 1 0 G 53318 Desulfocapsa 0.00 1 0 S 65555 Desulfocapsa sulfexigens 0.00 1 1 S1 1167006 Desulfocapsa sulfexigens DSM 10523 0.00 1 0 G 109168 Desulfotalea 0.00 1 0 S 84980 Desulfotalea psychrophila 0.00 1 1 S1 177439 Desulfotalea psychrophila LSv54 0.00 1 0 F 213121 Desulfobulbaceae 0.00 1 0 G 893 Desulfobulbus 0.00 1 0 G1 111746 environmental samples 0.00 1 1 S 239745 uncultured Desulfobulbus sp. 0.00 1 0 C 3024418 Desulfobacteria 0.00 1 0 O 213118 Desulfobacterales 0.00 1 0 F 213119 Desulfobacteraceae 0.00 1 0 G 2289 Desulfobacter 0.00 1 0 G1 240138 environmental samples 0.00 1 1 S 240139 uncultured Desulfobacter sp. 0.00 1 0 C 3031648 Syntrophia 0.00 1 0 O 2914038 Syntrophales 0.00 1 0 F 213468 Syntrophaceae 0.00 1 0 G 43773 Syntrophus 0.00 1 0 S 316277 Syntrophus aciditrophicus 0.00 1 1 S1 56780 Syntrophus aciditrophicus SB 0.03 13 0 P 508458 Synergistota 0.03 13 0 C 649775 Synergistia 0.03 13 0 O 649776 Synergistales 0.02 11 0 F 3029085 Aminithiophilaceae 0.02 11 0 G 3029078 Aminithiophilus 0.02 11 11 S 3029084 Aminithiophilus ramosus 0.00 1 0 F 649777 Synergistaceae 0.00 1 0 G 508459 Cloacibacillus 0.00 1 1 S 1197717 Cloacibacillus porcorum 0.00 1 0 F 3029086 Acetomicrobiaceae 0.00 1 0 G 49894 Acetomicrobium 0.00 1 0 S 97477 Acetomicrobium mobile 0.00 1 1 S1 891968 Acetomicrobium mobile DSM 13181 0.02 9 0 P 40117 Nitrospirota 0.02 9 0 C 203693 Nitrospiria 0.02 9 0 O 189778 Nitrospirales 0.02 9 0 F 189779 Nitrospiraceae 0.02 9 0 G 1234 Nitrospira 0.01 6 6 S 2973512 Nitrospira tepida 0.00 2 2 S 42253 Nitrospira moscoviensis 0.00 1 1 S 1715989 Candidatus Nitrospira inopinata 0.02 9 0 P 2818505 Myxococcota 0.01 7 0 P1 3031711 Polyangia 0.01 6 0 O 3031712 Polyangiales 0.01 3 0 F 49 Polyangiaceae 0.00 2 2 G 39643 Sorangium 0.00 1 0 G 1882917 Pajaroellobacter 0.00 1 1 S 1882918 Pajaroellobacter abortibovis 0.01 3 0 F 1524216 Labilitrichaceae 0.01 3 0 G 1524217 Labilithrix 0.01 3 3 S 1391654 Labilithrix luteola 0.00 1 0 O 3031714 Haliangiales 0.00 1 0 F 224464 Kofleriaceae 0.00 1 0 G 162027 Haliangium 0.00 1 0 S 80816 Haliangium ochraceum 0.00 1 1 S1 502025 Haliangium ochraceum DSM 14365 0.00 2 0 C 32015 Myxococcia 0.00 2 0 O 29 Myxococcales 0.00 2 0 O1 80811 Cystobacterineae 0.00 2 0 F 1524215 Anaeromyxobacteraceae 0.00 2 2 G 161492 Anaeromyxobacter 0.01 7 0 P 29547 Campylobacterota 0.01 7 0 C 3031852 Epsilonproteobacteria 0.01 5 0 O 213849 Campylobacterales 0.00 2 0 F 2771471 Sulfurimonadaceae 0.00 2 0 G 286130 Sulfuricurvum 0.00 1 0 S 148813 Sulfuricurvum kujiense 0.00 1 1 S1 709032 Sulfuricurvum kujiense DSM 16994 0.00 1 0 G1 2632390 unclassified Sulfuricurvum 0.00 1 1 S 1249480 Candidatus Sulfuricurvum sp. RIFRC-1 0.00 2 0 F 2808963 Arcobacteraceae 0.00 2 1 G 2321111 Aliarcobacter 0.00 1 1 S 28197 Aliarcobacter butzleri 0.00 1 0 F 2771472 Sulfurovaceae 0.00 1 1 G 265570 Sulfurovum 0.00 2 0 O 235899 Nautiliales 0.00 2 1 F 224467 Nautiliaceae 0.00 1 0 G 191301 Caminibacter 0.00 1 1 S 1424653 Caminibacter pacificus 0.01 6 0 D1 2323 Bacteria incertae sedis 0.01 6 0 D2 1783234 Bacteria candidate phyla 0.01 3 0 P 95818 Candidatus Saccharibacteria 0.01 3 0 C 2093818 Candidatus Saccharimonadia 0.00 2 0 O 2093819 Candidatus Nanosynbacterales 0.00 2 0 F 2093822 Candidatus Nanosynbacteraceae 0.00 2 0 G 2093823 Candidatus Nanosynbacter 0.00 2 2 S 2093824 Candidatus Nanosynbacter lyticus 0.00 1 0 O 2093825 Candidatus Saccharimonadales 0.00 1 0 F 2171986 Candidatus Saccharimonadaceae 0.00 1 0 G 1331051 Candidatus Saccharimonas 0.00 1 1 S 1332188 Candidatus Saccharimonas aalborgensis 0.00 2 0 D3 95901 Candidatus Dependentiae 0.00 2 0 C 2497643 Candidatus Babeliae 0.00 2 0 O 2497644 Candidatus Babeliales 0.00 2 0 F 2953756 Candidatus Chromulinivoraceae 0.00 2 0 G 2953757 Candidatus Chromulinivorax 0.00 2 2 S 2066483 Candidatus Chromulinivorax destructor 0.00 1 0 D3 1783273 Patescibacteria group 0.00 1 0 D4 1794810 Microgenomates group 0.00 1 0 D5 2715732 Microgenomates group incertae sedis 0.00 1 0 F 2715733 Candidatus Chazhemtobacteraceae 0.00 1 0 G 2715734 Candidatus Chazhemtobacterium 0.00 1 1 S 2715735 Candidatus Chazhemtobacterium aquaticus 0.00 2 0 P 32066 Fusobacteriota 0.00 2 0 C 203490 Fusobacteriia 0.00 2 0 O 203491 Fusobacteriales 0.00 2 0 F 203492 Fusobacteriaceae 0.00 2 1 G 848 Fusobacterium 0.00 1 0 S 1583098 Fusobacterium hwasookii 0.00 1 1 S1 1307442 Fusobacterium hwasookii ChDC F174 0.00 1 0 P 74152 Elusimicrobiota 0.00 1 0 C 447830 Endomicrobiia 0.00 1 0 O 1783344 Endomicrobiales 0.00 1 0 F 1783343 Endomicrobiaceae 0.00 1 0 G 1408194 Endomicrobium 0.00 1 1 S 1408204 Candidatus Endomicrobium trichonymphae 0.00 1 0 P 2138240 Coprothermobacterota 0.00 1 0 C 2138243 Coprothermobacteria 0.00 1 0 O 2138246 Coprothermobacterales 0.00 1 0 F 2138247 Coprothermobacteraceae 0.00 1 0 G 68335 Coprothermobacter 0.00 1 0 S 35786 Coprothermobacter proteolyticus 0.00 1 1 S1 309798 Coprothermobacter proteolyticus DSM 5265 0.00 1 0 D1 68525 delta/epsilon subdivisions 0.00 1 0 C 28221 Deltaproteobacteria 0.00 1 0 O 1779134 Bradymonadales 0.00 1 0 F 2946505 Microvenatoraceae 0.00 1 0 G 2946507 Microvenator 0.00 1 1 S 2600177 Microvenator marinus 0.00 1 0 P 203691 Spirochaetota 0.00 1 0 C 203692 Spirochaetia 0.00 1 0 O 136 Spirochaetales 0.00 1 0 F 2845253 Treponemataceae 0.00 1 1 G 157 Treponema 0.00 1 0 P 3018035 Bdellovibrionota 0.00 1 0 C 3031419 Bacteriovoracia 0.00 1 0 O 2024979 Bacteriovoracales 0.00 1 0 F 263369 Bacteriovoracaceae 0.00 1 0 G 263370 Peredibacter 0.00 1 1 S 28202 Peredibacter starrii 0.00 1 0 D 10239 Viruses 0.00 1 0 D1 2732004 Varidnaviria 0.00 1 0 K 2732005 Bamfordvirae 0.00 1 0 P 2732007 Nucleocytoviricota 0.00 1 0 C 2732523 Megaviricetes 0.00 1 0 O 2732555 Pimascovirales 0.00 1 0 F 944644 Marseilleviridae 0.00 1 0 G 1513458 Marseillevirus 0.00 1 0 G1 1813598 unclassified Marseillevirus 0.00 1 1 S 1826170 Tokyovirus A1