# Export date: 2026-06-12 06:48:08 # Microbe: Haloferax Haloferax namakaokahaiae (ID: 5195) # Total amplicons: 55 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21638 ERR12080744 AMPLICON PRJEB66381 Saltmarsh 53.75970051N 7.71765833E 2019-07-15 salt marsh sediment 28040460 SAMEA114446181 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080744 21612 ERR12080746 AMPLICON PRJEB66381 Saltmarsh 53.75981508N 7.71560755E 2019-07-15 salt marsh sediment 24259792 SAMEA114446183 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080746 21640 ERR12080747 AMPLICON PRJEB66381 Saltmarsh 53.75842165N 7.72091556E 2019-07-15 salt marsh sediment 36238259 SAMEA114446184 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080747 21614 ERR12080757 AMPLICON PRJEB66381 Saltmarsh 53.75979908N 7.7155871E 2019-07-15 salt marsh sediment 36331976 SAMEA114446194 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080757 21600 SRR10200277 AMPLICON PRJNA574840 Saltmarsh 29.895448N 88.82778W USA: Chandeleur Islands 2018-05-07 salt marsh sediment 25104500 SAMN12869849 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10200277 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 16703 SRR11930140 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 Mangrove mangrove sediments 832697366 SAMN15143744 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930140 20943 SRR12852795 AMPLICON PRJNA670253 Saltmarsh 32.751719N 79.897581W USA: Charleston\, SC 2018-06-25 sediment 58610942 SAMN16490845 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852795 20944 SRR12852796 AMPLICON PRJNA670253 Saltmarsh 32.751719N 79.897581W USA: Charleston\, SC 2018-06-25 sediment 40835498 SAMN16490844 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852796 20945 SRR12852798 AMPLICON PRJNA670253 Saltmarsh 32.751719N 79.897581W USA: Charleston\, SC 2018-06-25 sediment 85533591 SAMN16490843 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852798 20946 SRR12852800 AMPLICON PRJNA670253 Saltmarsh 32.751719N 79.897581W USA: Charleston\, SC 2018-06-25 sediment 129006137 SAMN16490841 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852800 20947 SRR12852801 AMPLICON PRJNA670253 Saltmarsh 32.751719N 79.897581W USA: Charleston\, SC 2018-06-25 sediment 53317782 SAMN16490840 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852801 21242 SRR12852821 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 3245259 SAMN16490798 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852821 21243 SRR12852823 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 22071088 SAMN16490796 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852823 20960 SRR12852824 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 7532218 SAMN16490795 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852824 20961 SRR12852825 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 6606456 SAMN16490794 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852825 20963 SRR12852829 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 6893521 SAMN16490791 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852829 20964 SRR12852830 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 5896640 SAMN16490790 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852830 21507 SRR12995321 AMPLICON PRJNA666636 Saltmarsh 31.39001N 81.2758W USA: Georgia 2019-07-08 Sporobolus alterniflorus sediment 46927462 SAMN16678297 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995321 15173 SRR14740860 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 112903200 SAMN19581150 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740860 15175 SRR14740862 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 99717000 SAMN19581148 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740862 15176 SRR14740863 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 106847400 SAMN19581147 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740863 15177 SRR14740864 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 104609400 SAMN19581146 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740864 15183 SRR14740870 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 123038400 SAMN19581141 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740870 15225 SRR14740912 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Sediment 94983000 SAMN19581103 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740912 15226 SRR14740913 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Sediment 84873600 SAMN19581102 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740913 15227 SRR14740914 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Sediment 74832600 SAMN19581101 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740914 15460 SRR14741150 AMPLICON PRJNA735404 Mangrove 1.410703 N 103.991095 E Malaysia: Chek Jawa 2017/03/07 Sonneratia alba and Avicennia alba Sediment 68865000 SAMN19581348 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741150 15671 SRR14741361 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 48217200 SAMN19581517 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741361 18901 SRR18349726 AMPLICON PRJNA817083 Mangrove 24.4 N 67.1 E Pakistan: Lasbela 2019/11/15 Mangrove mangrove sediments 127710185 SAMN26747205 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349726 16920 SRR19251822 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove sediment 18439922 SAMN26511799 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19251822 22043 SRR22025450 AMPLICON PRJNA893704 Saltmarsh 38.74663N 76.37007W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 96918636 SAMN31431881 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025450 22044 SRR22025451 AMPLICON PRJNA893704 Saltmarsh 38.74663N 76.37007W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 78184478 SAMN31431880 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025451 22045 SRR22025452 AMPLICON PRJNA893704 Saltmarsh 38.74663N 76.37007W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 98923003 SAMN31431879 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025452 22055 SRR22025464 AMPLICON PRJNA893704 Saltmarsh 38.75533N 76.38017W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 84398424 SAMN31431868 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025464 22073 SRR22025484 AMPLICON PRJNA893704 Saltmarsh 38.76089N 76.38416W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 60722179 SAMN31431850 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025484 22090 SRR23933683 AMPLICON PRJNA925448 Saltmarsh 43.2926N 70.5725W USA: Wells\, Maine 2021-06-22 marsh sediment 49448004 SAMN33188437 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933683 18415 SRR27644508 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 26640326 SAMN39505292 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644508 18471 SRR27644564 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/23 Mangrove soil 10375814 SAMN39505241 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644564 18521 SRR27644614 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 14885882 SAMN39505283 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644614 21691 SRR5360920 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2015 Salt marsh sediment 131437922 SAMN06606318 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360920 21706 SRR5360936 AMPLICON PRJNA379357 Saltmarsh 53.76205N 7.7234E Germany: Spiekeroog 2015 Salt marsh sediment 126771648 SAMN06606302 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360936 21718 SRR5360949 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2014 Salt marsh sediment 97142823 SAMN06606289 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360949 21721 SRR5360952 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2014 Salt marsh sediment 74715789 SAMN06606286 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360952 15834 SRR5814363 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 79396038 SAMN07338379 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814363 15839 SRR5814372 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 86075662 SAMN07338388 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814372 16432 SRR5886353 AMPLICON PRJNA339628 Mangrove 22.20 N 39.5 E Saudi Arabia: KAUST 2025/03/16 Mangrove Sediment 147371459 SAMN06834566 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5886353 16435 SRR5886356 AMPLICON PRJNA339628 Mangrove 22.20 N 39.5 E Saudi Arabia: KAUST 2025/03/16 Mangrove Sediment 141965325 SAMN06834569 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5886356 16444 SRR5886365 AMPLICON PRJNA339628 Mangrove 22.20 N 39.5 E Saudi Arabia: KAUST 2025/03/16 Mangrove Sediment 164092118 SAMN06834544 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5886365 16519 SRR5886441 AMPLICON PRJNA339628 Mangrove 22.20 N 39.5 E Saudi Arabia: KAUST 2025/03/16 Mangrove Sediment 81953788 SAMN06834525 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5886441 17353 SRR7585480 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove Sediment 18439922 SAMN09700191 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585480 15878 SRR7585703 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/08/17 Mangrove Sediment 14664715 SAMN09700025 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585703 16001 SRR7585826 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/08/16 Mangrove Sediment 17678258 SAMN09699946 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585826 20900 SRR9597789 AMPLICON PRJNA551237 Saltmarsh 40.618433N 73.834383W USA:New York\,Jamaica Bay 2015-07 Salt marsh sediment 1724128352 SAMN12142399 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR9597789