# Export date: 2026-06-13 01:03:11 # Microbe: Methanobacterium_D_1054 Methanobacterium_D_1054 oryzae (ID: 5298) # Total amplicons: 32 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 16700 SRR11930137 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 1010770215 SAMN15143747 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930137 14974 SRR12164904 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 97331435 SAMN15447446 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164904 14921 SRR12400118 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 92957645 SAMN15718367 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400118 20967 SRR12852834 AMPLICON PRJNA670253 Saltmarsh 30.09861N 84.14806W USA: St. Marks\, FL 2018-06-19 sediment 6157232 SAMN16490786 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852834 21247 SRR12852835 AMPLICON PRJNA670253 Saltmarsh 30.09861N 84.14806W USA: St. Marks\, FL 2018-06-19 sediment 7486203 SAMN16490785 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852835 18023 SRR25728253 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.572972 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 51823170 SAMN37055122 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728253 18024 SRR25728254 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.572972 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 41447098 SAMN37055121 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728254 18042 SRR25728272 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574472 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 41094326 SAMN37055131 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728272 18043 SRR25728273 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574472 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 43489684 SAMN37055130 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728273 18045 SRR25728275 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574472 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 35980938 SAMN37055130 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728275 18048 SRR25728278 AMPLICON PRJNA1007244 Mangrove 20.2445S 106.572611 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 36445080 SAMN37055125 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728278 18049 SRR25728279 AMPLICON PRJNA1007244 Mangrove 20.2445S 106.572611 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 36336720 SAMN37055125 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728279 18058 SRR25728288 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.572972 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 46457544 SAMN37055122 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728288 18059 SRR25728289 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.572972 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 39471936 SAMN37055122 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728289 18062 SRR25728292 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574472 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 40414066 SAMN37055112 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728292 18063 SRR25728293 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574444 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 44826124 SAMN37055111 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728293 18065 SRR25728295 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574472 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 44991674 SAMN37055113 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728295 18088 SRR25728318 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 37228884 SAMN37055118 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728318 18093 SRR25728323 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 42995442 SAMN37055118 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728323 18096 SRR25728326 AMPLICON PRJNA1007244 Mangrove 20.243389S 106.574778 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 39119164 SAMN37055116 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728326 18100 SRR25728330 AMPLICON PRJNA1007244 Mangrove 20.243389S 106.574778 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 35377734 SAMN37055116 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728330 18102 SRR25728332 AMPLICON PRJNA1007244 Mangrove 20.2445S 106.572611 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 44653350 SAMN37055107 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728332 18117 SRR25728347 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.572972 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 43433096 SAMN37055104 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728347 18123 SRR25728353 AMPLICON PRJNA1007244 Mangrove 20.2445S 106.572611 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 39741632 SAMN37055106 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728353 18126 SRR25728356 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.572972 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 37121728 SAMN37055103 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728356 18128 SRR25728358 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 43905666 SAMN37055100 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728358 18129 SRR25728359 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 41232184 SAMN37055100 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728359 18130 SRR25728360 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 48135318 SAMN37055100 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728360 17580 SRR5814405 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 74803109 SAMN07338393 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5814405 17585 SRR5817740 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 72221890 SAMN07337790 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5817740 17224 SRR6201141 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 42073852 SAMN07813288 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6201141 21067 SRR8931076 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:10:00Z soil 22702016 SAMN11465908 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931076