# Export date: 2026-06-15 12:06:19 # Microbe: Rugosimonospora_371197 (ID: 5603) # Total amplicons: 22 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19667 SRR10092799 AMPLICON PRJNA564581 Seaweed 38.35277778N 141.05972222E Japan 2017/08/27 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 34175756 SAMN12716368 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092799 19668 SRR10092800 AMPLICON PRJNA564581 Seaweed 38.35277778N 141.05972222E Japan 2017/08/27 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 8017422 SAMN12716367 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092800 19685 SRR10092817 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 1128631 SAMN12716522 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092817 19774 SRR10092906 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 5218819 SAMN12716567 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092906 16703 SRR11930140 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 Mangrove mangrove sediments 832697366 SAMN15143744 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930140 20771 SRR13380137 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-06 Salt marsh sediment 48154905 SAMN17251822 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380137 15312 SRR14740999 AMPLICON PRJNA735404 Mangrove 1.410703 N 103.991095 E Malaysia: Chek Jawa 2017/03/07 Sonneratia alba and Avicennia alba Sediment 53289000 SAMN19581024 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740999 23726 SRR15068636 AMPLICON PRJNA744715 Seagrass 37.2 N 122.34 E China:Weihai 2019-06 Degradation sediment 479592223 SAMN20115047 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15068636 16747 SRR15306179 AMPLICON PRJNA750750 Mangrove 25.45172 S 48.68672 W Brazil: Antonina 2018/04/29 Mangrove estuarine mud 3281659 SAMN20486501 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15306179 16750 SRR15306182 AMPLICON PRJNA750750 Mangrove 25.54280 S 48.29905 W Brazil: Ilha do Mel 2018/04/28 Mangrove estuarine mud 18583833 SAMN20486498 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15306182 22045 SRR22025452 AMPLICON PRJNA893704 Saltmarsh 38.74663N 76.37007W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 98923003 SAMN31431879 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025452 22059 SRR22025469 AMPLICON PRJNA893704 Saltmarsh 38.7474N 76.37045W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 64270004 SAMN31431864 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025469 22064 SRR22025474 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.37022W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 60544144 SAMN31431859 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025474 22065 SRR22025475 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.37022W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 60210525 SAMN31431858 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025475 22067 SRR22025477 AMPLICON PRJNA893704 Saltmarsh 38.76422N 76.38453W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 57411505 SAMN31431856 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025477 22069 SRR22025480 AMPLICON PRJNA893704 Saltmarsh 38.76422N 76.38453W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 62237657 SAMN31431854 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025480 22077 SRR22025488 AMPLICON PRJNA893704 Saltmarsh 38.77305N 76.37801W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 64366788 SAMN31431846 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025488 22254 SRR27176438 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 69628516 SAMN38763955 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176438 22255 SRR27176439 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 76483312 SAMN38763954 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176439 22256 SRR27176440 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 79093498 SAMN38763953 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176440 22270 SRR27176458 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 33995234 SAMN38763974 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176458 22275 SRR27176464 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 39517304 SAMN38763969 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176464