# Export date: 2026-06-15 14:22:54 # Microbe: Pseudonocardia Pseudonocardia hydrocarbonoxydans (ID: 5686) # Total amplicons: 24 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 20618 SRR12228803 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 36028000 SAMN10953560 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228803 20644 SRR13379990 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-06 Salt marsh sediment 39196071 SAMN17251870 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13379990 20650 SRR13379998 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 12640156 SAMN17251878 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13379998 20681 SRR13380032 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 32754671 SAMN17251815 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380032 20687 SRR13380039 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-06 Salt marsh sediment 39775613 SAMN17251824 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380039 20688 SRR13380040 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-06 Salt marsh sediment 29954109 SAMN17251823 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380040 20698 SRR13380051 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 29027432 SAMN17251769 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380051 20707 SRR13380061 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-06 Salt marsh sediment 33786749 SAMN17251775 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380061 20723 SRR13380079 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 41902338 SAMN17251914 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380079 20740 SRR13380104 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 25597555 SAMN17251780 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380104 20767 SRR13380133 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 32115236 SAMN17251868 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380133 20778 SRR13380144 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 32332429 SAMN17251827 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380144 20779 SRR13380145 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 21219010 SAMN17251826 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380145 20780 SRR13380146 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 39571938 SAMN17251767 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380146 19228 SRR13741167 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/08 Seawater 46933349 SAMN16984780 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741167 18002 SRR25619875 AMPLICON PRJNA1004744 Mangrove 22.528333S 114.003056 E China: Shenzhen 2025/02/18 Mangrove mangrove sediment 18781033 SAMN36953844 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619875 18003 SRR25619876 AMPLICON PRJNA1004744 Mangrove 19.977222S 110.5594440 E China: Hainan 2025/02/18 Mangrove mangrove sediment 18612211 SAMN36953843 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619876 18004 SRR25619877 AMPLICON PRJNA1004744 Mangrove 19.9772221S 110.5594440 E China: Hainan 2025/02/18 Mangrove mangrove sediment 18888119 SAMN36953842 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619877 18006 SRR25619879 AMPLICON PRJNA1004744 Mangrove 21.153056S 110.4386112 E China: Zhanjiang 2025/02/18 Mangrove mangrove sediment 18749480 SAMN36953861 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619879 18007 SRR25619880 AMPLICON PRJNA1004744 Mangrove 21.1530561S 110.438611 E China: Zhanjiang 2025/02/18 Mangrove mangrove sediment 18750754 SAMN36953860 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619880 18011 SRR25619884 AMPLICON PRJNA1004744 Mangrove 21.153056S 110.438611 E China: Zhanjiang 2025/02/18 Mangrove mangrove sediment 18631583 SAMN36953857 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619884 18012 SRR25619885 AMPLICON PRJNA1004744 Mangrove 21.153056S 110.438611 E China: Zhanjiang 2025/02/18 Mangrove mangrove sediment 18868450 SAMN36953856 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619885 18022 SRR25619895 AMPLICON PRJNA1004744 Mangrove 19.977222S 110.559444 E China: Hainan 2025/02/18 Mangrove mangrove sediment 18983360 SAMN36953838 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619895 22248 SRR27176432 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 27659878 SAMN38763961 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176432