# Export date: 2026-06-15 19:25:55 # Microbe: Collinsella (ID: 5809) # Total amplicons: 70 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 20023 SRR10030030 AMPLICON PRJNA562320 Seaweed 5.3642786N 100.3590186E Malaysia: Pulau Pinang\, Pulau Korea 2016/05/11 Gracilaria sp. Plant 76322000 SAMN12638442 PAIRED Illumina HiSeq 1000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10030030 20024 SRR10030031 AMPLICON PRJNA562320 Seaweed 5.3642786N 100.3590184E Malaysia: Pulau Pinang\, Pulau Korea 2016/05/11 Gracilaria sp. Plant 72802000 SAMN12638441 PAIRED Illumina HiSeq 1000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10030031 20025 SRR10030032 AMPLICON PRJNA562320 Seaweed 5.6195748N 100.2949879E Malaysia: Kedah\, Kuala Muda 2016/05/10 Gracilaria sp. Plant 76830000 SAMN12638440 PAIRED Illumina HiSeq 1000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10030032 23308 SRR10723728 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Tanmen 2016-07-20 seagrass sediment 46906500 SAMN13567211 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723728 21170 SRR11233120 AMPLICON PRJNA602775 Saltmarsh 41.123N 69.996W USA: Harwich\, MA Muddy Creek Marsh 2017-07 sediment 17193832 SAMN13950526 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233120 15793 SRR11310761 AMPLICON PRJNA612579 Mangrove 21.5 N 111.01 E China: Dianbai 2019/04/25 mangrove mangrove plant 33228626 SAMN14377376 PAIRED Illumina MiniSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11310761 15794 SRR11310762 AMPLICON PRJNA612579 Mangrove 21.5 N 111.01 E China: Dianbai 2019/04/25 mangrove mangrove plant 34634086 SAMN14377375 PAIRED Illumina MiniSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11310762 15795 SRR11310763 AMPLICON PRJNA612579 Mangrove 21.5 N 111.01 E China: Dianbai 2019/04/25 mangrove mangrove plant 40117294 SAMN14377374 PAIRED Illumina MiniSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11310763 15796 SRR11310764 AMPLICON PRJNA612579 Mangrove 21.5 N 111.01 E China: Dianbai 2019/04/25 mangrove mangrove plant 35952436 SAMN14377373 PAIRED Illumina MiniSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11310764 16589 SRR11392214 AMPLICON PRJNA613787 Mangrove 21.5 N 111.01 E China: Dianbai 2019/04/25 Mangrove mangrove plant 40117294 SAMN14419948 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11392214 16590 SRR11392215 AMPLICON PRJNA613787 Mangrove 21.5 N 111.01 E China: Dianbai 2019/04/25 Mangrove mangrove plant 35952436 SAMN14419947 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11392215 16705 SRR11930142 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 Mangrove mangrove sediments 578528504 SAMN15143742 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930142 14997 SRR13291653 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 33813618 SAMN17075149 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291653 14998 SRR13291655 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 38934198 SAMN17075147 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291655 15000 SRR13291657 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 31954974 SAMN17075145 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291657 15001 SRR13291658 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 32674926 SAMN17075144 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291658 15003 SRR13291661 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 33228626 SAMN17075142 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291661 15004 SRR13291662 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 34634086 SAMN17075141 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291662 16734 SRR13291663 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 40117294 SAMN17075140 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291663 15005 SRR13291664 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 39949898 SAMN17075139 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291664 15007 SRR13291666 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root-associated soil 39994360 SAMN17075137 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291666 16736 SRR13291668 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root-associated soil 40006624 SAMN17075135 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291668 15008 SRR13291669 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root-associated soil 28112266 SAMN17075134 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291669 15010 SRR13291671 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root-associated soil 33831820 SAMN17075133 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291671 16737 SRR13291672 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root-associated soil 40036034 SAMN17075132 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291672 18985 SRR13958805 AMPLICON PRJNA713958 Mangrove China: Hainan island 2025/12/17 Mangrove/intertidal mudflats mangrove forest and intertidal mudflats sediments 28822500 SAMN18275835 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13958805 18993 SRR13958813 AMPLICON PRJNA713958 Mangrove China: Hainan island 2025/12/17 Mangrove/intertidal mudflats mangrove forest and intertidal mudflats sediments 20797000 SAMN18275843 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13958813 15593 SRR14741283 AMPLICON PRJNA735404 Mangrove 2.408307 N 101.858851 E Malaysia: Port Dickson 2017/03/07 Sonneratia alba and Avicennia alba Sediment 62618400 SAMN19581228 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741283 16746 SRR15306178 AMPLICON PRJNA750750 Mangrove 25.45141 S 48.68719 W Brazil: Antonina 2018/04/29 Mangrove estuarine mud 14624988 SAMN20486502 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15306178 16748 SRR15306180 AMPLICON PRJNA750750 Mangrove 25.52291 S 48.50183 W Brazil: Ilha dos Valadares 2018/04/29 Mangrove estuarine mud 11764351 SAMN20486500 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15306180 16749 SRR15306181 AMPLICON PRJNA750750 Mangrove 25.52405 S 48.50327 W Brazil: Ilha dos Valadares 2018/04/29 Mangrove estuarine mud 25904387 SAMN20486499 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15306181 24009 SRR19242039 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 51696500 SAMN28462888 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242039 24012 SRR19242042 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 52797000 SAMN28462885 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242042 24013 SRR19242043 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 49367000 SAMN28462884 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242043 24015 SRR19242045 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 53971500 SAMN28462882 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242045 24023 SRR19242053 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 51992500 SAMN28462875 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242053 24024 SRR19242054 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 49860000 SAMN28462874 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242054 24025 SRR19242055 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50681000 SAMN28462873 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242055 24026 SRR19242056 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50508000 SAMN28462872 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242056 24027 SRR19242057 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50421500 SAMN28462871 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242057 24028 SRR19242058 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50261000 SAMN28462870 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242058 24056 SRR19242086 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 45454500 SAMN28462845 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242086 24057 SRR19242087 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 37160500 SAMN28462844 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242087 24058 SRR19242088 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 33853000 SAMN28462843 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242088 24061 SRR19242091 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 31252500 SAMN28462840 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242091 24063 SRR19242093 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2020-08 seagrass seawater 33209500 SAMN28462830 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242093 20542 SRR19745556 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 50846136 SAMN29155017 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745556 20516 SRR19745557 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 52336856 SAMN29155016 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745557 20517 SRR19745558 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 50917284 SAMN29155015 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745558 20518 SRR19745559 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 49533528 SAMN29155014 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745559 20519 SRR19745560 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 52309268 SAMN29155013 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745560 20520 SRR19745561 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 52423492 SAMN29155012 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745561 20526 SRR19745571 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 49200052 SAMN29155011 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745571 20533 SRR19745582 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 53224996 SAMN29155010 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745582 20539 SRR19745590 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 55374440 SAMN29155020 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745590 20540 SRR19745591 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 55250536 SAMN29155019 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745591 20553 SRR19745592 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 51458396 SAMN29155018 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745592 20554 SRR19745593 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 51087652 SAMN29155009 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745593 20541 SRR19745594 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 51860116 SAMN29155008 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745594 24162 SRR23829617 AMPLICON PRJNA944167 Seagrass 1.90526 S 123.08915 E Indonesia: Banggai 2010-07 Syringodium isoetifolium plant 23362416 SAMN33739231 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829617 24208 SRR23829663 AMPLICON PRJNA944167 Seagrass 5.86356 S 106.61062 E Indonesia: Pari 2010-06 Syringodium isoetifolium plant 43461390 SAMN33739346 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829663 24293 SRR23829748 AMPLICON PRJNA944167 Seagrass 5.64577 S 132.63785 E Indonesia: Tual 2011-07 Syringodium isoetifolium plant 32358704 SAMN33739356 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829748 16855 SRR26222186 AMPLICON PRJNA1021532 Mangrove 15.2933 N 73.4958 E India 2020/08/05 Mangrove mangrove sediment 871077000 SAMN37558049 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222186 16856 SRR26222187 AMPLICON PRJNA1021532 Mangrove 15.2958 N 73.4911 E India 2020/08/05 Mangrove mangrove sediment 1049480500 SAMN37558048 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222187 16838 SRR28031518 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 46390800 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031518 16841 SRR28031521 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 40207200 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031521 16844 SRR28031524 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 72966300 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031524 16852 SRR28031532 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 45090900 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031532 16565 SRR5725177 AMPLICON PRJNA390570 Mangrove 15.52 N 73.90 E India: Goa 2015/02/05 Mangrove SOIL 34879196 SAMN06675417 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5725177 21915 SRR6398161 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.3837605W USA 2013-07-07 Salt marsh sediment 2978461 SAMN08214137 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398161