# Export date: 2026-06-15 15:10:58 # Microbe: Rubrobacter_B_405439 (ID: 5821) # Total amplicons: 42 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22516 ERR2888348 AMPLICON PRJEB29670 Seagrass 3.629383 S 39.872271 E 2016-05-04 Thalassodendron ciliatum water 27187575 SAMEA5079738 SINGLE Ion Torrent PGM METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2888348 19680 SRR10092812 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 41076044 SAMN12716527 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092812 19681 SRR10092813 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 21537143 SAMN12716526 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092813 19684 SRR10092816 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 17909467 SAMN12716523 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092816 19685 SRR10092817 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 1128631 SAMN12716522 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092817 19687 SRR10092819 AMPLICON PRJNA564581 Seaweed 48.51472222N 1.96972222W France 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 8093968 SAMN12716451 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092819 19688 SRR10092820 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 414858 SAMN12716520 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092820 19692 SRR10092824 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 5022768 SAMN12716516 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092824 19693 SRR10092825 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 1804261 SAMN12716515 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092825 19694 SRR10092826 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 19124640 SAMN12716566 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092826 19695 SRR10092827 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 14810885 SAMN12716565 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092827 19698 SRR10092830 AMPLICON PRJNA564581 Seaweed 48.51472222N 1.96972222W France 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 5037610 SAMN12716450 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092830 19700 SRR10092832 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 52782253 SAMN12716561 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092832 19701 SRR10092833 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 60044449 SAMN12716560 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092833 19715 SRR10092847 AMPLICON PRJNA564581 Seaweed 38.35277778N 141.05972222E Japan 2017/08/27 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 18647400 SAMN12716360 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092847 19756 SRR10092888 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 51968492 SAMN12716555 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092888 19764 SRR10092896 AMPLICON PRJNA564581 Seaweed 37.271976N 76.022743W USA 2017/09/09 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 993656 SAMN12716615 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092896 19767 SRR10092899 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 33414569 SAMN12716554 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092899 19778 SRR10092910 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 26716900 SAMN12716553 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092910 19790 SRR10092922 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 34664297 SAMN12716552 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092922 19801 SRR10092933 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 8544622 SAMN12716551 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092933 19856 SRR10092988 AMPLICON PRJNA564581 Seaweed 48.68361111N 3.9575W France 2017/09/23 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 11874501 SAMN12716461 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092988 19864 SRR10092996 AMPLICON PRJNA564581 Seaweed 37.271976N 76.022743W USA 2017/09/09 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 15172826 SAMN12716603 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092996 19867 SRR10092999 AMPLICON PRJNA564581 Seaweed 48.68361111N 3.9575W France 2017/09/23 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 4617099 SAMN12716460 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092999 19889 SRR10093021 AMPLICON PRJNA564581 Seaweed 48.68361111N 3.9575W France 2017/09/23 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 37928063 SAMN12716458 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10093021 19890 SRR10093022 AMPLICON PRJNA564581 Seaweed 48.51472222N 1.96972222W France 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 12533866 SAMN12716448 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10093022 19891 SRR10093023 AMPLICON PRJNA564581 Seaweed 48.51472222N 1.96972222W France 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 8588923 SAMN12716447 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10093023 20569 SRR12125042 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 50206200 SAMN15414968 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125042 20577 SRR12125051 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 125860707 SAMN15414954 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125051 14808 SRR15928125 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 98261804 SAMN21467043 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928125 14844 SRR15928161 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/08/21 coral coral 21127112 SAMN21467010 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928161 14879 SRR15928196 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/05/27 coral coral 14777756 SAMN21466978 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928196 14887 SRR15928204 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/05/27 coral coral 35055833 SAMN21466971 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928204 17840 SRR17658357 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 51982335 SAMN25078402 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658357 24068 SRR19536301 AMPLICON PRJNA845084 Seagrass 34.95 S 138.5 E Australia: West Beach\, South Australia 2019 Posidonia angustifolia roots 14781167 SAMN28854754 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19536301 24081 SRR19536341 AMPLICON PRJNA845084 Seagrass 34.95 S 138.5 E Australia: West Beach\, South Australia 2019 Posidonia angustifolia roots 16877487 SAMN28854753 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19536341 16853 SRR28031533 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 91456800 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031533 17791 SRR4858370 AMPLICON PRJNA351850 Mangrove 21.74 N 88.14 E India: West Bengal'' 2014/07/25 bacterioplankton Chemaguri creek in Sundarbans mangrove ecoregion 557254391 SAMN05954868 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4858370 21905 SRR6398151 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38379W USA 2013-07-07 Salt marsh sediment 17845118 SAMN08214123 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398151 21913 SRR6398159 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38377W USA 2013-07-07 Salt marsh sediment 5562211 SAMN08214121 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398159 21917 SRR6398163 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.3837603W USA 2013-07-07 Salt marsh sediment 2443043 SAMN08214135 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398163 21925 SRR6398172 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.383766W USA 2013-07-07 Salt marsh sediment 6144654 SAMN08214129 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398172