# Export date: 2026-06-15 14:16:46 # Microbe: Lewinella_A Lewinella_A sp003390935 (ID: 5966) # Total amplicons: 101 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21614 ERR12080757 AMPLICON PRJEB66381 Saltmarsh 53.75979908N 7.7155871E 2019-07-15 salt marsh sediment 36331976 SAMEA114446194 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080757 21649 ERR12080759 AMPLICON PRJEB66381 Saltmarsh 53.75872608N 7.71908464E 2019-07-15 salt marsh sediment 35591525 SAMEA114446196 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080759 21650 ERR12080760 AMPLICON PRJEB66381 Saltmarsh 53.75919508N 7.71899634E 2019-07-15 salt marsh sediment 44792071 SAMEA114446198 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080760 21135 SRR11232914 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2015-10-22 sediment 9029940 SAMN13950495 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11232914 21363 SRR11232923 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9956W USA: Harwich\, MA Muddy Creek Marsh 2016-10-12 sediment 6110218 SAMN13950603 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11232923 20826 SRR11232935 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2016-10-26 sediment 14108598 SAMN13950493 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11232935 21375 SRR11233019 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9948W USA: Harwich\, MA Muddy Creek Marsh 2016-08-25 sediment 13540676 SAMN13950722 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233019 21141 SRR11233050 AMPLICON PRJNA602775 Saltmarsh 41.7757N 69.9414W USA: Orleans\, MA marsh at end of Sparrowhawk Road 2016-03-22 sediment 7763873 SAMN13950676 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233050 21145 SRR11233054 AMPLICON PRJNA602775 Saltmarsh 41.712N 69.9955W USA: Harwich\, MA Muddy Creek Marsh 2016-03-27 sediment 11136429 SAMN13950673 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233054 21148 SRR11233057 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9948W USA: Harwich\, MA Muddy Creek Marsh 2016-03-27 sediment 7162328 SAMN13950671 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233057 21377 SRR11233061 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2016-03-22 sediment 6549835 SAMN13950666 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233061 21378 SRR11233062 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9688W USA: Orleans\, MA marsh off of Crows Landing 2016-03-22 sediment 5659469 SAMN13950665 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233062 21380 SRR11233064 AMPLICON PRJNA602775 Saltmarsh 41.7396N 69.9691W USA: Orleans\, MA marsh off of Crows Landing 2016-03-22 sediment 12382028 SAMN13950667 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233064 21151 SRR11233066 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9956W USA: Harwich\, MA Muddy Creek Marsh 2016-06-30 sediment 23989051 SAMN13950662 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233066 21153 SRR11233069 AMPLICON PRJNA602775 Saltmarsh 41.123N 69.996W USA: Harwich\, MA Muddy Creek Marsh 2016-06-30 sediment 25656024 SAMN13950659 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233069 20844 SRR11233091 AMPLICON PRJNA602775 Saltmarsh 41.7757N 69.9414W USA: Orleans\, MA marsh at end of Sparrowhawk Road 2017-10-30 sediment 15510218 SAMN13950639 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233091 21166 SRR11233093 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9688W USA: Orleans\, MA marsh off of Crows Landing 2017-06 sediment 27780930 SAMN13950482 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233093 20855 SRR11233107 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9688W USA: Orleans\, MA marsh off of Crows Landing 2015-10-22 sediment 22219684 SAMN13950488 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233107 20861 SRR11233150 AMPLICON PRJNA602775 Saltmarsh 41.7387N 69.9699W USA: Orleans\, MA marsh off of Davis Road 2017-08 sediment 16276279 SAMN13950513 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233150 21394 SRR11233162 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9688W USA: Orleans\, MA marsh off of Crows Landing 2017-08 sediment 25268554 SAMN13950485 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233162 21397 SRR11233187 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2015-08-26 sediment 12926978 SAMN13950702 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233187 21178 SRR11233188 AMPLICON PRJNA602775 Saltmarsh 41.7389N 69.9699W USA: Orleans\, MA marsh off of Davis Road 2016-07-26 sediment 12784015 SAMN13950504 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233188 21181 SRR11233194 AMPLICON PRJNA602775 Saltmarsh 41.7758N 69.9413W USA: Orleans\, MA marsh at end of Sparrowhawk Road 2016-06-27 sediment 8422213 SAMN13950696 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233194 20868 SRR11233195 AMPLICON PRJNA602775 Saltmarsh 41.776N 69.9412W USA: Orleans\, MA marsh at end of Sparrowhawk Road 2016-06-27 sediment 8048777 SAMN13950695 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233195 20873 SRR11233206 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2017-07 sediment 13094203 SAMN13950491 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233206 20877 SRR11233210 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9954W USA: Harwich\, MA Muddy Creek Marsh 2016-06 sediment 14103156 SAMN13950571 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233210 20881 SRR11233216 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2016-07-26 sediment 7687253 SAMN13950490 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233216 21191 SRR11233224 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9951W USA: Harwich\, MA Muddy Creek Marsh 2017-06 sediment 25900207 SAMN13950554 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233224 20886 SRR11233229 AMPLICON PRJNA602775 Saltmarsh 41.7757N 69.9414W USA: Orleans\, MA marsh at end of Sparrowhawk Road 2016-06-27 sediment 14866020 SAMN13950697 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233229 20889 SRR11233232 AMPLICON PRJNA602775 Saltmarsh 41.7389N 69.9699W USA: Orleans\, MA marsh off of Davis Road 2016-06-27 sediment 11284203 SAMN13950692 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233232 21400 SRR11233236 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9688W USA: Orleans\, MA marsh off of Crows Landing 2016-06-27 sediment 10660390 SAMN13950689 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233236 20893 SRR11233243 AMPLICON PRJNA602775 Saltmarsh 41.7757N 69.9414W USA: Orleans\, MA marsh at end of Sparrowhawk Road 2015-06-07 sediment 6478337 SAMN13950685 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233243 20899 SRR11233257 AMPLICON PRJNA602775 Saltmarsh 41.7396N 69.9691W USA: Orleans\, MA marsh off of Crows Landing 2016-07-26 sediment 9508681 SAMN13950497 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233257 21404 SRR11233263 AMPLICON PRJNA602775 Saltmarsh 41.7758N 69.9413W USA: Orleans\, MA marsh at end of Sparrowhawk Road 2017-06 sediment 21493684 SAMN13950627 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233263 21410 SRR11233269 AMPLICON PRJNA602775 Saltmarsh 41.7396N 69.9691W USA: Orleans\, MA marsh off of Crows Landing 2017-06 sediment 17360437 SAMN13950496 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233269 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 23648 SRR12086835 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Spartina alterniflora sediment 291127669 SAMN15364576 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086835 20946 SRR12852800 AMPLICON PRJNA670253 Saltmarsh 32.751719N 79.897581W USA: Charleston\, SC 2018-06-25 sediment 129006137 SAMN16490841 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852800 21006 SRR12852896 AMPLICON PRJNA670253 Saltmarsh 29.762475N 81.264453W USA: St. Augustine\, FL 2018-06-22 sediment 91728560 SAMN16490824 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852896 20673 SRR13380024 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2016-05 Salt marsh sediment 4923042 SAMN17251831 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380024 20793 SRR13380161 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-04 Salt marsh sediment 5153646 SAMN17251853 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380161 15253 SRR14740940 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Leaf 94122000 SAMN19581077 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740940 15254 SRR14740941 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Leaf 85643400 SAMN19581076 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740941 15260 SRR14740947 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Leaf 80769600 SAMN19581071 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740947 15261 SRR14740948 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Leaf 87951000 SAMN19581070 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740948 15291 SRR14740978 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 55304400 SAMN19580882 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740978 15437 SRR14741126 AMPLICON PRJNA735404 Mangrove 2.781230 N 104.206822 E Malaysia: Tioman 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 44118000 SAMN19581369 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741126 17804 SRR17658321 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 50439119 SAMN25078434 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658321 17812 SRR17658329 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/20 marine biofilm biofilm 37786444 SAMN25078427 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658329 17836 SRR17658353 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 38390724 SAMN25078405 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658353 19189 SRR19419815 AMPLICON PRJNA842720 Mangrove 29.823997N 84.576637 W USA:Florida 2019/11/14 Rhizophora mangle.Rhizophoraceae Viviparous fruits of R. mangle 39881911 SAMN28684495 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19419815 22031 SRR22025437 AMPLICON PRJNA893704 Saltmarsh 38.72246N 76.33719W USA: Chesapeake Bay 2019-06-28 Spartina alterniflora peat soil 137840869 SAMN31431893 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025437 22060 SRR22025470 AMPLICON PRJNA893704 Saltmarsh 38.7474N 76.37045W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 60500685 SAMN31431863 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025470 22091 SRR23933684 AMPLICON PRJNA925448 Saltmarsh 44.570643N 67.912657W USA: Cherryfield\, Maine 2021-07-29 marsh sediment 48299930 SAMN33188436 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933684 22094 SRR23933687 AMPLICON PRJNA925448 Saltmarsh 44.570643N 67.912657W USA: Cherryfield\, Maine 2021-06-24 marsh sediment 34360896 SAMN33188433 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933687 22100 SRR23933743 AMPLICON PRJNA925448 Saltmarsh 44.616826N 67.802903W USA: Harrington\, Maine 2021-06-25 marsh sediment 135641404 SAMN33188457 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933743 22102 SRR23933819 AMPLICON PRJNA925448 Saltmarsh 43.2926N 70.5725W USA: Wells\, Maine 2021-06-25 marsh sediment 42478738 SAMN33188475 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933819 21632 SRR26165217 AMPLICON PRJNA1019769 Saltmarsh USA:Delaware\,St Jones Reserve 2020 sediment 3047642 SAMN37494735 SINGLE Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR26165217 21673 SRR5360899 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2015 Salt marsh sediment 140821227 SAMN06606339 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360899 21699 SRR5360929 AMPLICON PRJNA379357 Saltmarsh 53.7626N 7.72312E Germany: Spiekeroog 2015 Salt marsh sediment 126574189 SAMN06606309 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360929 16959 SRR6200760 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 21982863 SAMN07813326 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200760 16993 SRR6200794 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 33228084 SAMN07813348 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200794 17003 SRR6200804 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 24266715 SAMN07813385 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200804 17030 SRR6200831 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 29580062 SAMN07813288 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200831 21041 SRR8207359 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2015-12-09 Spartina alterniflora sediment 24052089 SAMN10439478 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207359 21042 SRR8207360 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2015-12-09 Spartina alterniflora sediment 15823004 SAMN10439479 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207360 21285 SRR9089771 AMPLICON PRJNA543559 Saltmarsh 30.87N 121.94E China:Shanghai 2017-03 salt marsh soil 38112620 SAMN11774862 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089771 21293 SRR9089779 AMPLICON PRJNA543559 Saltmarsh 30.89N 121.97E China:Shanghai 2018-03 salt marsh soil 43419852 SAMN11774870 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089779