# Export date: 2026-06-15 20:22:16 # Microbe: Algoriphagus Algoriphagus machipongonensis (ID: 6030) # Total amplicons: 44 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21651 ERR12080761 AMPLICON PRJEB66381 Saltmarsh 53.762199N 7.7228E 2019-07-15 salt marsh sediment 36258609 SAMEA114446199 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080761 19680 SRR10092812 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 41076044 SAMN12716527 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092812 19788 SRR10092920 AMPLICON PRJNA564581 Seaweed 43.04777778N 144.94972222E Japan 2016/09/15 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 19124542 SAMN12716373 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092920 19792 SRR10092924 AMPLICON PRJNA564581 Seaweed 43.04777778N 144.94972222E Japan 2016/09/15 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 16200745 SAMN12716370 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092924 19809 SRR10092941 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/20 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 47976079 SAMN12716474 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092941 19810 SRR10092942 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/20 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 45965226 SAMN12716473 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092942 19811 SRR10092943 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/20 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 61360634 SAMN12716472 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092943 19813 SRR10092945 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/20 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 62756019 SAMN12716471 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092945 19815 SRR10092947 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/20 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 29157390 SAMN12716469 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092947 19837 SRR10092969 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/13 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 28503121 SAMN12716480 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092969 19839 SRR10092971 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/13 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 25317110 SAMN12716478 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092971 19841 SRR10092973 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/13 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 25151892 SAMN12716476 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092973 19842 SRR10092974 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/13 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 27495105 SAMN12716475 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092974 20616 SRR12228798 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 133311500 SAMN10953563 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228798 20617 SRR12228800 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 236680000 SAMN10953561 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228800 20618 SRR12228803 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 36028000 SAMN10953560 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228803 20620 SRR12228825 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 41594000 SAMN10953558 PAIRED Illumina MiSeq METAGENOMIC ITS https://www.ncbi.nlm.nih.gov/sra/SRR12228825 20628 SRR12228838 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 47792000 SAMN10953573 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228838 20632 SRR12228844 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 175354000 SAMN10953567 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228844 20634 SRR12228846 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 63238500 SAMN10953565 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228846 20635 SRR12228847 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 12300500 SAMN10953556 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228847 22049 SRR22025458 AMPLICON PRJNA893704 Saltmarsh 38.76196N 76.38418W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 59313091 SAMN31431874 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025458 22050 SRR22025459 AMPLICON PRJNA893704 Saltmarsh 38.75742N 76.3789W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 133524708 SAMN31431873 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025459 22051 SRR22025460 AMPLICON PRJNA893704 Saltmarsh 38.75742N 76.3789W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 77126328 SAMN31431872 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025460 22052 SRR22025461 AMPLICON PRJNA893704 Saltmarsh 38.75742N 76.3789W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 83300808 SAMN31431871 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025461 21664 SRR5360889 AMPLICON PRJNA379357 Saltmarsh 53.76266N 7.7225E Germany: Spiekeroog 2015 Salt marsh sediment 149046571 SAMN06606349 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360889 21666 SRR5360892 AMPLICON PRJNA379357 Saltmarsh 53.76196N 7.72275E Germany: Spiekeroog 2015 Salt marsh sediment 138904742 SAMN06606346 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360892 21670 SRR5360896 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72346E Germany: Spiekeroog 2015 Salt marsh sediment 105858161 SAMN06606342 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360896 21680 SRR5360907 AMPLICON PRJNA379357 Saltmarsh 53.76202N 7.7222E Germany: Spiekeroog 2015 Salt marsh sediment 127603870 SAMN06606331 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360907 21694 SRR5360923 AMPLICON PRJNA379357 Saltmarsh 53.76266N 7.7225E Germany: Spiekeroog 2015 Salt marsh sediment 162747816 SAMN06606315 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360923 21703 SRR5360933 AMPLICON PRJNA379357 Saltmarsh 53.76209N 7.72326E Germany: Spiekeroog 2015 Salt marsh sediment 135271604 SAMN06606305 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360933 21709 SRR5360939 AMPLICON PRJNA379357 Saltmarsh 53.76196N 7.72275E Germany: Spiekeroog 2015 Salt marsh sediment 182606625 SAMN06606299 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360939 21710 SRR5360940 AMPLICON PRJNA379357 Saltmarsh 53.76261N 7.72296E Germany: Spiekeroog 2014 Salt marsh sediment 37826169 SAMN06606298 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360940 21714 SRR5360944 AMPLICON PRJNA379357 Saltmarsh 53.76209N 7.72294E Germany: Spiekeroog 2014 Salt marsh sediment 47497837 SAMN06606294 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360944 21717 SRR5360948 AMPLICON PRJNA379357 Saltmarsh 53.76192N 7.72321E Germany: Spiekeroog 2014 Salt marsh sediment 39032469 SAMN06606290 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360948 21722 SRR5360953 AMPLICON PRJNA379357 Saltmarsh 53.76226N 7.72227E Germany: Spiekeroog 2014 Salt marsh sediment 48956942 SAMN06606285 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360953 21948 SRR5486562 AMPLICON PRJNA384656 Saltmarsh 32.5576N 80.4365W USA:South Carolina\,ACE Basin Wildlife Refuge 2010-10-10 salt marsh tidal mudflat 59673744 SAMN06843734 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486562 22013 SRR5486636 AMPLICON PRJNA384656 Saltmarsh 41.5806N 70.5198W USA:Massachusetts\,Waquoit Bay 2010-10-19 salt marsh tidal mudflat 67763474 SAMN06843659 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486636 17016 SRR6200817 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 23317104 SAMN07813357 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200817 21895 SRR6371066 AMPLICON PRJNA422172 Saltmarsh 37.78N 119.1E China 2017-10-04 Salt marsh soils 34037682 SAMN08166689 PAIRED Illumina MiniSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR6371066 21754 SRR7877438 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-08-01 Salt marsh sediment 48684802 SAMN10092110 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877438 21778 SRR7877465 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-08-01 Salt marsh sediment 54666077 SAMN10092108 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877465 21783 SRR7877470 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-08-01 Salt marsh sediment 30749046 SAMN10092105 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877470 21871 SRR7877570 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-08-01 Salt marsh sediment 62708592 SAMN10092094 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877570