# Export date: 2026-06-15 22:39:26 # Microbe: Cyclobacterium Cyclobacterium amurskyense (ID: 6054) # Total amplicons: 48 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21638 ERR12080744 AMPLICON PRJEB66381 Saltmarsh 53.75970051N 7.71765833E 2019-07-15 salt marsh sediment 28040460 SAMEA114446181 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080744 21639 ERR12080745 AMPLICON PRJEB66381 Saltmarsh 53.75956037N 7.71675561E 2019-07-15 salt marsh sediment 55637259 SAMEA114446182 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080745 21612 ERR12080746 AMPLICON PRJEB66381 Saltmarsh 53.75981508N 7.71560755E 2019-07-15 salt marsh sediment 24259792 SAMEA114446183 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080746 21640 ERR12080747 AMPLICON PRJEB66381 Saltmarsh 53.75842165N 7.72091556E 2019-07-15 salt marsh sediment 36238259 SAMEA114446184 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080747 21642 ERR12080749 AMPLICON PRJEB66381 Saltmarsh 53.75920507N 7.71902046E 2019-07-15 salt marsh sediment 39430492 SAMEA114446186 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080749 21644 ERR12080751 AMPLICON PRJEB66381 Saltmarsh 53.75957867N 7.71678221E 2019-07-15 salt marsh sediment 50991346 SAMEA114446188 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080751 21645 ERR12080752 AMPLICON PRJEB66381 Saltmarsh 53.75984101N 7.71565287E 2019-07-15 salt marsh sediment 30858945 SAMEA114446189 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080752 21646 ERR12080753 AMPLICON PRJEB66381 Saltmarsh 53.75843454N 7.72094172E 2019-07-15 salt marsh sediment 36752666 SAMEA114446190 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080753 21613 ERR12080756 AMPLICON PRJEB66381 Saltmarsh 53.75954603N 7.71673026E 2019-07-15 salt marsh sediment 40309567 SAMEA114446193 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080756 21615 ERR12080758 AMPLICON PRJEB66381 Saltmarsh 53.75840802N 7.7208867E 2019-07-15 salt marsh sediment 42918048 SAMEA114446195 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080758 21656 ERR12080767 AMPLICON PRJEB66381 Saltmarsh 53.7626241N 7.72289697E 2019-07-15 salt marsh sediment 27760909 SAMEA114446205 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080767 21657 ERR12080768 AMPLICON PRJEB66381 Saltmarsh 53.76264435N 7.72270043E 2019-07-15 salt marsh sediment 30331668 SAMEA114446206 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080768 21616 ERR12080769 AMPLICON PRJEB66381 Saltmarsh 53.76266697N 7.72244677E 2019-07-15 salt marsh sediment 42693632 SAMEA114446207 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080769 21660 ERR12080773 AMPLICON PRJEB66381 Saltmarsh 53.7619302N 7.71609E 2019-07-15 salt marsh sediment 34473262 SAMEA114446211 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080773 19655 SRR10092787 AMPLICON PRJNA564581 Seaweed 43.04777778N 144.94972222E Japan 2017/08/31 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 20969568 SAMN12716382 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092787 19695 SRR10092827 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 14810885 SAMN12716565 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092827 21598 SRR10200268 AMPLICON PRJNA574840 Saltmarsh 29.895448N 88.82778W USA: Chandeleur Islands 2018-05-07 salt marsh sediment 17461000 SAMN12869857 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10200268 21599 SRR10200273 AMPLICON PRJNA574840 Saltmarsh 29.895448N 88.82778W USA: Chandeleur Islands 2018-05-07 salt marsh sediment 57315000 SAMN12869853 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10200273 21600 SRR10200277 AMPLICON PRJNA574840 Saltmarsh 29.895448N 88.82778W USA: Chandeleur Islands 2018-05-07 salt marsh sediment 25104500 SAMN12869849 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10200277 22107 SRR23933937 AMPLICON PRJNA925448 Saltmarsh 41.2611N 72.5491W USA: Madison\, Connecticut marsh sediment 133105300 SAMN33188282 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933937 21661 SRR5360886 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2015 Salt marsh sediment 148825846 SAMN06606352 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360886 21662 SRR5360887 AMPLICON PRJNA379357 Saltmarsh 53.76226N 7.72227E Germany: Spiekeroog 2015 Salt marsh sediment 166936558 SAMN06606351 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360887 21667 SRR5360893 AMPLICON PRJNA379357 Saltmarsh 53.7626N 7.72312E Germany: Spiekeroog 2015 Salt marsh sediment 132962904 SAMN06606345 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360893 21668 SRR5360894 AMPLICON PRJNA379357 Saltmarsh 53.76209N 7.72294E Germany: Spiekeroog 2015 Salt marsh sediment 119446479 SAMN06606344 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360894 21673 SRR5360899 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2015 Salt marsh sediment 140821227 SAMN06606339 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360899 21683 SRR5360911 AMPLICON PRJNA379357 Saltmarsh 53.76209N 7.72294E Germany: Spiekeroog 2015 Salt marsh sediment 183951321 SAMN06606327 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360911 21686 SRR5360914 AMPLICON PRJNA379357 Saltmarsh 53.76205N 7.7234E Germany: Spiekeroog 2015 Salt marsh sediment 115035163 SAMN06606324 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360914 21687 SRR5360915 AMPLICON PRJNA379357 Saltmarsh 53.76191N 7.72333E Germany: Spiekeroog 2015 Salt marsh sediment 144342196 SAMN06606323 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360915 21691 SRR5360920 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2015 Salt marsh sediment 131437922 SAMN06606318 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360920 21692 SRR5360921 AMPLICON PRJNA379357 Saltmarsh 53.76226N 7.72227E Germany: Spiekeroog 2015 Salt marsh sediment 140249245 SAMN06606317 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360921 21695 SRR5360925 AMPLICON PRJNA379357 Saltmarsh 53.76201N 7.72231E Germany: Spiekeroog 2015 Salt marsh sediment 110789471 SAMN06606313 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360925 21701 SRR5360931 AMPLICON PRJNA379357 Saltmarsh 53.76195N 7.72287E Germany: Spiekeroog 2015 Salt marsh sediment 157372512 SAMN06606307 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360931 21706 SRR5360936 AMPLICON PRJNA379357 Saltmarsh 53.76205N 7.7234E Germany: Spiekeroog 2015 Salt marsh sediment 126771648 SAMN06606302 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360936 21713 SRR5360943 AMPLICON PRJNA379357 Saltmarsh 53.7626N 7.72312E Germany: Spiekeroog 2014 Salt marsh sediment 89615105 SAMN06606295 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360943 21714 SRR5360944 AMPLICON PRJNA379357 Saltmarsh 53.76209N 7.72294E Germany: Spiekeroog 2014 Salt marsh sediment 47497837 SAMN06606294 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360944 21715 SRR5360945 AMPLICON PRJNA379357 Saltmarsh 53.76195N 7.72287E Germany: Spiekeroog 2014 Salt marsh sediment 28875013 SAMN06606293 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360945 21718 SRR5360949 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2014 Salt marsh sediment 97142823 SAMN06606289 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360949 21719 SRR5360950 AMPLICON PRJNA379357 Saltmarsh 53.76205N 7.7234E Germany: Spiekeroog 2014 Salt marsh sediment 69872797 SAMN06606288 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360950 21720 SRR5360951 AMPLICON PRJNA379357 Saltmarsh 53.76191N 7.72333E Germany: Spiekeroog 2014 Salt marsh sediment 50467575 SAMN06606287 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360951 21721 SRR5360952 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2014 Salt marsh sediment 74715789 SAMN06606286 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360952 21722 SRR5360953 AMPLICON PRJNA379357 Saltmarsh 53.76226N 7.72227E Germany: Spiekeroog 2014 Salt marsh sediment 48956942 SAMN06606285 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360953 21724 SRR5360955 AMPLICON PRJNA379357 Saltmarsh 53.76266N 7.7225E Germany: Spiekeroog 2014 Salt marsh sediment 89447558 SAMN06606283 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360955 21726 SRR5360957 AMPLICON PRJNA379357 Saltmarsh 53.76201N 7.72231E Germany: Spiekeroog 2014 Salt marsh sediment 70383628 SAMN06606281 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360957 22142 SRR6761106 AMPLICON PRJNA433990 Saltmarsh 29.86375N 88.841472W USA: Chandeleur Islands 2016-05-24 salt marsh sediment 253239728 SAMN08536647 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761106 22143 SRR6761107 AMPLICON PRJNA433990 Saltmarsh 29.927611N 88.829306W USA: Chandeleur Islands 2016-05-24 salt marsh sediment 223977712 SAMN08536658 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761107