# Export date: 2026-06-15 16:30:26 # Microbe: Croceibacter Croceibacter atlanticus (ID: 6236) # Total amplicons: 52 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21614 ERR12080757 AMPLICON PRJEB66381 Saltmarsh 53.75979908N 7.7155871E 2019-07-15 salt marsh sediment 36331976 SAMEA114446194 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080757 21615 ERR12080758 AMPLICON PRJEB66381 Saltmarsh 53.75840802N 7.7208867E 2019-07-15 salt marsh sediment 42918048 SAMEA114446195 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080758 21649 ERR12080759 AMPLICON PRJEB66381 Saltmarsh 53.75872608N 7.71908464E 2019-07-15 salt marsh sediment 35591525 SAMEA114446196 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080759 21650 ERR12080760 AMPLICON PRJEB66381 Saltmarsh 53.75919508N 7.71899634E 2019-07-15 salt marsh sediment 44792071 SAMEA114446198 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080760 19902 SRR12033714 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/02/01 Water Seawater 34236500 SAMN15250101 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033714 19922 SRR12033734 AMPLICON PRJNA639819 Seaweed 43N 6.11E France: Porquerolles island north 2017/05/01 Water Seawater 56236500 SAMN15250131 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033734 19924 SRR12033736 AMPLICON PRJNA639819 Seaweed 43.5N 5.54E France: La Seyne 2017/05/01 Water Seawater 45399000 SAMN15250129 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033736 19929 SRR12033741 AMPLICON PRJNA639819 Seaweed 43.7N 6.16E France: La Londe-les-Maures 2017/05/01 Water Seawater 40678500 SAMN15250124 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033741 19931 SRR12033743 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/04/01 Water Seawater 67886000 SAMN15250122 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033743 19934 SRR12033746 AMPLICON PRJNA639819 Seaweed 43N 6.11E France: Porquerolles island north 2017/04/01 Water Seawater 34276000 SAMN15250120 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033746 19936 SRR12033748 AMPLICON PRJNA639819 Seaweed 43.5N 5.54E France: La Seyne 2017/04/01 Water Seawater 26301500 SAMN15250118 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033748 19938 SRR12033750 AMPLICON PRJNA639819 Seaweed 43.5N 6.5E France: Carqueiranne 2017/04/01 Water Seawater 34736000 SAMN15250116 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033750 19940 SRR12033752 AMPLICON PRJNA639819 Seaweed 43.7N 6.16E France: La Londe-les-Maures 2017/04/01 Water Seawater 35232000 SAMN15250114 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033752 19941 SRR12033753 AMPLICON PRJNA639819 Seaweed 43.7N 6.16E France: La Londe-les-Maures 2017/04/01 Rocky_surface Seawater 30445000 SAMN15250113 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033753 19942 SRR12033754 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/03/01 Water Seawater 55765500 SAMN15250112 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033754 19983 SRR12033795 AMPLICON PRJNA639819 Seaweed 43.5N 5.54E France: La Seyne 2017/03/01 Water Seawater 43003000 SAMN15250108 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033795 19985 SRR12033797 AMPLICON PRJNA639819 Seaweed 43.5N 6.5E France: Carqueiranne 2017/03/01 Water Seawater 31803500 SAMN15250106 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033797 20009 SRR12033821 AMPLICON PRJNA639819 Seaweed 43.7N 6.16E France: La Londe-les-Maures 2017/03/01 Water Seawater 33630500 SAMN15250103 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033821 20617 SRR12228800 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 236680000 SAMN10953561 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228800 20618 SRR12228803 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 36028000 SAMN10953560 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228803 20623 SRR12228832 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 110630000 SAMN10953578 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228832 20624 SRR12228834 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 554476500 SAMN10953576 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228834 20626 SRR12228836 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 206085000 SAMN10953557 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228836 20632 SRR12228844 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 175354000 SAMN10953567 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228844 19237 SRR13741176 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/05 Seawater 55025491 SAMN16984772 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741176 14863 SRR15928180 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 73452175 SAMN21466993 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928180 14865 SRR15928182 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 73141666 SAMN21466991 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928182 17808 SRR17658325 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 39676160 SAMN25078431 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658325 17816 SRR17658333 AMPLICON PRJNA798089 Mangrove 33.8568146S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 35507743 SAMN25078388 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658333 17824 SRR17658341 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 49784213 SAMN25078416 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658341 17827 SRR17658344 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 40080707 SAMN25078387 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658344 17832 SRR17658349 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 46937393 SAMN25078409 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658349 17839 SRR17658356 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 41295050 SAMN25078403 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658356 17841 SRR17658358 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 29882517 SAMN25078401 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658358 17842 SRR17658359 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 38970534 SAMN25078400 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658359 17844 SRR17658361 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 47115733 SAMN25078398 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658361 17845 SRR17658362 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 42224511 SAMN25078397 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658362 17846 SRR17658363 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 41518893 SAMN25078396 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658363 17849 SRR17658366 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 31426026 SAMN25078392 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658366 17850 SRR17658367 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 39357150 SAMN25078455 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658367 17855 SRR17658372 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 23174615 SAMN25078451 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658372 17859 SRR17658376 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 26825654 SAMN25078447 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658376 20550 SRR19745579 AMPLICON PRJNA850096 Seaweed China:Putian 2020/01/08 after seaweed culture estuarine water 55645664 SAMN29155030 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745579 24330 SRR24965703 AMPLICON PRJNA985394 Seagrass 37.21 N 122.62 E China:Shandong 2021-06 Zostera marina coastal sea water 24239530 SAMN35796548 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR24965703 24333 SRR24965706 AMPLICON PRJNA985394 Seagrass 37.04 N 122.57 E China:Shandong 2021-06 Zostera marina coastal sea water 23904216 SAMN35796545 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR24965706 24335 SRR24965708 AMPLICON PRJNA985394 Seagrass 37.04 N 122.57 E China:Shandong 2021-06 Zostera marina coastal sea water 21112742 SAMN35796543 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR24965708 18389 SRR25047502 AMPLICON PRJNA988256 Mangrove 1.2198 N 103.8506 E Singapore: Bendera Bay 2021/08/11 plastic plastic 68534690 SAMN36011497 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047502 20400 SRR26913606 AMPLICON PRJNA1043828 Seaweed 33.9921S 151.2312E Australia: New South Wales\, Sydney\, Bare Island 2020/03/01 Delisea pulchra host associated 116038848 SAMN38354152 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26913606 20408 SRR26913614 AMPLICON PRJNA1043828 Seaweed 33.9921S 151.2312E Australia: New South Wales\, Sydney\, Bare Island 2020/03/01 Delisea pulchra host associated 72199298 SAMN38354146 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26913614 20419 SRR26913625 AMPLICON PRJNA1043828 Seaweed 33.9921S 151.2312E Australia: New South Wales\, Sydney\, Bare Island 2020/03/01 Delisea pulchra host associated 114426012 SAMN38354145 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26913625 20429 SRR26913635 AMPLICON PRJNA1043828 Seaweed 33.9921S 151.2312E Australia: New South Wales\, Sydney\, Bare Island 2020/03/01 Delisea pulchra host associated 89024450 SAMN38354153 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26913635 21911 SRR6398157 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38374W USA 2013-07-07 Salt marsh sediment 6993263 SAMN08214119 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398157