# Export date: 2026-06-15 21:28:22 # Microbe: Flavobacterium Flavobacterium sediminis (ID: 6349) # Total amplicons: 37 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 15021 SRR12164888 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 97442589 SAMN15447434 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164888 14940 SRR12708820 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode mangrove sediment 16881000 SAMN16261224 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708820 15179 SRR14740866 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 87639600 SAMN19581144 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740866 14957 SRR15606927 AMPLICON PRJNA757625 Mangrove 22.5286 N 114.0028 E China 2025/05/20 Mangrove mangrove sidiments 45046456 SAMN20969823 PAIRED Illumina MiSeq OTHER 16S https://www.ncbi.nlm.nih.gov/sra/SRR15606927 23747 SRR18298268 AMPLICON PRJNA774145 Seagrass 19.51159 N 85.14737 E India 2018-04-21 seagrass sediment 16889876 SAMN22568717 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298268 23866 SRR18298387 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18679 E India 2018-04-14 seagrass sediment 19169404 SAMN22568837 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298387 23874 SRR18298395 AMPLICON PRJNA774145 Seagrass 19.51136 N 85.15342 E India 2018-04-21 seagrass sediment 10306560 SAMN22568849 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298395 23949 SRR18298470 AMPLICON PRJNA774145 Seagrass 19.5116 N 85.15327 E India 2018-04-21 seagrass sediment 13161873 SAMN22568729 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298470 24034 SRR19242064 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-11 seagrass seawater 48626000 SAMN28462865 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242064 18313 SRR25047426 AMPLICON PRJNA988256 Mangrove 1.4450 N 103.7335 E Singapore: Sungei Buloh Wetland Reserve 2021/07/27 plastic plastic 79813160 SAMN36011642 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047426 22695 SRR26898554 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass root 42138500 SAMN38338624 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898554 22697 SRR26898556 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass leaf 41406500 SAMN38338622 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898556 22705 SRR26898564 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass root 42323000 SAMN38338628 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898564 22706 SRR26898565 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass leaf 40566500 SAMN38338627 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898565 17790 SRR4858369 AMPLICON PRJNA351850 Mangrove 21.67 N 88.15 E India:West Bengal'' 2014/07/25 bacterioplankton Mooriganga estuary in Sundarbans mangrove ecoregion 561760176 SAMN05954869 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4858369 17791 SRR4858370 AMPLICON PRJNA351850 Mangrove 21.74 N 88.14 E India: West Bengal'' 2014/07/25 bacterioplankton Chemaguri creek in Sundarbans mangrove ecoregion 557254391 SAMN05954868 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4858370 16074 SRR5877317 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 83764288 SAMN06834398 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877317 16077 SRR5877320 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 150281899 SAMN06834397 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877320 16105 SRR5877348 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 125524709 SAMN06834421 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877348 16131 SRR5877374 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 82138672 SAMN06834437 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877374 16324 SRR5880086 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 125524709 SAMN06834421 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880086 16369 SRR5880131 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 83764288 SAMN06834398 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880131 16370 SRR5880132 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 150281899 SAMN06834397 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880132 16427 SRR5880189 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 82138672 SAMN06834437 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880189 17041 SRR6200842 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 21103442 SAMN07813367 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200842 22134 SRR6761096 AMPLICON PRJNA433990 Saltmarsh 29.86375N 88.841472W USA: Chandeleur Islands 2017-02-23 salt marsh sediment 250262838 SAMN08536652 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761096 22135 SRR6761097 AMPLICON PRJNA433990 Saltmarsh 29.86375N 88.841472W USA: Chandeleur Islands 2016-11-15 salt marsh sediment 214583502 SAMN08536651 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761097 22140 SRR6761103 AMPLICON PRJNA433990 Saltmarsh 29.86375N 88.841472W USA: Chandeleur Islands 2016-09-20 salt marsh sediment 212416904 SAMN08536649 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761103 22145 SRR6761109 AMPLICON PRJNA433990 Saltmarsh 29.927599N 88.829308W USA: Chandeleur Islands 2016-09-20 salt marsh sediment 210903476 SAMN08536654 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761109 15126 SRR9213686 AMPLICON PRJNA543557 Mangrove 9.58 N 79.17 E India:Puthuvype Mangrove 2017/10/01 Puthuvype and Mangalavanam Sediment samples are collected from Puthuvype mangrove region 150242400 SAMN11772331 PAIRED Illumina HiSeq 4000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9213686 16611 SRR9593075 AMPLICON PRJNA550512 Mangrove 6.8328889 N 101.000333 E Thailand 2018/07/31 Mud estuarine mud 54210723 SAMN12124994 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593075 16612 SRR9593076 AMPLICON PRJNA550512 Mangrove 6.8328889 N 101.000333 E Thailand 2018/04/01 Mud estuarine mud 56355281 SAMN12124993 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593076 16625 SRR9593089 AMPLICON PRJNA550512 Mangrove 6.8487778 N 101.00833 E Thailand 2018/04/01 Mud estuarine mud 55709593 SAMN12124990 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593089 16655 SRR9593119 AMPLICON PRJNA550512 Mangrove 6.89094 N 101.004166 E Thailand 2017/12/04 Mud estuarine mud 50110379 SAMN12124974 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593119 16663 SRR9593127 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2018/04/01 Mud estuarine mud 30667032 SAMN12124987 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593127