# Export date: 2026-06-15 22:50:51 # Microbe: Flavobacterium Flavobacterium suaedae (ID: 6355) # Total amplicons: 44 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22445 DRR403357 AMPLICON PRJDB14309 Seagrass 35.315753 N 139.789322 E Japan:Chiba\, Futsu 2019-07-04 seagrass Seagrass leaf 77567854 SAMD00532443 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403357 22476 DRR403391 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass leaf 66949186 SAMD00532477 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403391 22477 DRR403392 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass leaf 68431868 SAMD00532478 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403392 22478 DRR403393 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass leaf 66495392 SAMD00532479 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403393 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 23647 SRR12086834 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Spartina alterniflora sediment 304651991 SAMN15364577 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086834 23658 SRR12086845 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Spartina alterniflora sediment 304752972 SAMN15364579 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086845 20624 SRR12228834 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 554476500 SAMN10953576 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228834 20975 SRR12852846 AMPLICON PRJNA670253 Saltmarsh 29.62861N 85.09056W USA: Apalachicola\, FL 2018-06-20 sediment 5113183 SAMN16490775 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852846 15149 SRR14740836 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 60716400 SAMN19581171 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740836 15280 SRR14740967 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 46706400 SAMN19580883 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740967 15288 SRR14740975 AMPLICON PRJNA735404 Mangrove 1.211727 N 103.758781 E Malaysia: Semakau 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 51374400 SAMN19581046 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740975 15292 SRR14740979 AMPLICON PRJNA735404 Mangrove 1.211727 N 103.758781 E Malaysia: Semakau 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 55345200 SAMN19581043 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740979 15313 SRR14741000 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 51080400 SAMN19580880 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741000 15338 SRR14741025 AMPLICON PRJNA735404 Mangrove 1.410703 N 103.991095 E Malaysia: Chek Jawa 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 42865200 SAMN19581001 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741025 15340 SRR14741027 AMPLICON PRJNA735404 Mangrove 1.410703 N 103.991095 E Malaysia: Chek Jawa 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 42545400 SAMN19580999 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741027 15357 SRR14741044 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 38623200 SAMN19580876 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741044 15479 SRR14741169 AMPLICON PRJNA735404 Mangrove 1.410703 N 103.991095 E Malaysia: Chek Jawa 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 54721200 SAMN19581331 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741169 15573 SRR14741263 AMPLICON PRJNA735404 Mangrove 6.456892 N 99.822607 E Malaysia: Langkawi 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 49212600 SAMN19581246 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741263 15612 SRR14741302 AMPLICON PRJNA735404 Mangrove 2.408307 N 101.858851 E Malaysia: Port Dickson 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 38638800 SAMN19581211 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741302 15614 SRR14741304 AMPLICON PRJNA735404 Mangrove 2.408307 N 101.858851 E Malaysia: Port Dickson 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 36841200 SAMN19581209 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741304 17775 SRR21291246 AMPLICON PRJNA874590 Mangrove 14.56 N 61.01000000 W Martinique:Pointe Merle 2025/06/18 Mangrove sediment 14672575 SAMN30556381 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR21291246 24164 SRR23829619 AMPLICON PRJNA944167 Seagrass 1.90526 S 123.08915 E Indonesia: Banggai 2010-07 Syringodium isoetifolium plant 26007604 SAMN33739229 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829619 24235 SRR23829690 AMPLICON PRJNA944167 Seagrass 5.87927 S 110.43198 E Indonesia: Karimunjawa 2011-08 Syringodium isoetifolium plant 56246064 SAMN33739313 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829690 24282 SRR23829737 AMPLICON PRJNA944167 Seagrass 5.64577 S 132.63785 E Indonesia: Tual 2011-07 Syringodium isoetifolium plant 26399506 SAMN33739360 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829737 24302 SRR23829757 AMPLICON PRJNA944167 Seagrass 5.87927 S 110.43198 E Indonesia: Karimunjawa 2011-08 Syringodium isoetifolium plant 31554432 SAMN33739310 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829757 24318 SRR23829773 AMPLICON PRJNA944167 Seagrass 1.74401 N 128.03611 E Indonesia: Halmahera 2010-06 Syringodium isoetifolium plant 48662670 SAMN33739296 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829773 24323 SRR23829778 AMPLICON PRJNA944167 Seagrass 1.74401 N 128.03611 E Indonesia: Halmahera 2010-06 Syringodium isoetifolium plant 57510264 SAMN33739291 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829778 17680 SRR23961230 AMPLICON PRJNA774281 Mangrove 25.1029428 N 80.43759313 W USA: Florida Keys\, Florida 1905/07/06 Mangrove plant matter 32022689 SAMN33844852 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23961230 18158 SRR25047271 AMPLICON PRJNA988256 Mangrove 1.2153 N 103.7582 E Singapore: Semakau 2021/08/24 plastic plastic 97062868 SAMN36011688 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047271 18166 SRR25047279 AMPLICON PRJNA988256 Mangrove 1.2147 N 03.7586 E Singapore: Semakau 2021/08/25 sediment sediment 54502070 SAMN36011681 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047279 18377 SRR25047490 AMPLICON PRJNA988256 Mangrove 1.4459 N 103.7078 E Singapore: Lim Chu Kang 2021/07/28 plastic plastic 43699180 SAMN36011552 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047490 18392 SRR25047505 AMPLICON PRJNA988256 Mangrove 1.2256 N 103.8605 E Singapore: Kusu Island 2021/09/09 plastic plastic 37301124 SAMN36011539 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047505 18395 SRR25047508 AMPLICON PRJNA988256 Mangrove 1.2256 N 103.8605 E Singapore: Kusu Island 2021/09/09 plastic plastic 38279374 SAMN36011536 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047508 18497 SRR27644590 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 6271936 SAMN39505379 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644590 18573 SRR27644666 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 13623824 SAMN39505426 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644666 18584 SRR27644677 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/21 Mangrove soil 17316076 SAMN39505416 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644677 21951 SRR5486566 AMPLICON PRJNA384656 Saltmarsh 34.7221N 76.6798W USA:North Carolina\,Rachel Carson Reserve 2010-10-08 salt marsh tidal mudflat 63958816 SAMN06843730 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486566 21972 SRR5486592 AMPLICON PRJNA384656 Saltmarsh 34.7221N 76.6798W USA:North Carolina\,Rachel Carson Reserve 2010-10-08 salt marsh tidal mudflat 69582722 SAMN06843704 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486592 21979 SRR5486599 AMPLICON PRJNA384656 Saltmarsh 34.7221N 76.6798W USA:North Carolina\,Rachel Carson Reserve 2010-10-08 salt marsh tidal mudflat 41323134 SAMN06843697 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486599 21980 SRR5486600 AMPLICON PRJNA384656 Saltmarsh 34.7221N 76.6798W USA:North Carolina\,Rachel Carson Reserve 2010-10-08 salt marsh tidal mudflat 50754710 SAMN06843696 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486600 21993 SRR5486616 AMPLICON PRJNA384656 Saltmarsh 39.0889N 75.4363W USA:Deleware\,St. Jones Reserve 2010-10-05 salt marsh tidal mudflat 74330638 SAMN06843680 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486616 21994 SRR5486617 AMPLICON PRJNA384656 Saltmarsh 39.0889N 75.4363W USA:Deleware\,St. Jones Reserve 2010-10-05 salt marsh tidal mudflat 76897364 SAMN06843679 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486617