# Export date: 2026-06-16 13:37:27 # Microbe: Gramella Gramella lutea (ID: 6411) # Total amplicons: 48 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 15034 SRR10392987 AMPLICON PRJNA578400 Mangrove 18.3202416 N 64.7247868 W Virgin Islands: Southern Shore of St. John 2017/07/23 Seawater Northeastern Caribbean Seawater 37936140 SAMN13071630 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR10392987 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 20942 SRR12852794 AMPLICON PRJNA670253 Saltmarsh 32.751719N 79.897581W USA: Charleston\, SC 2018-06-25 sediment 83490883 SAMN16490846 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852794 20946 SRR12852800 AMPLICON PRJNA670253 Saltmarsh 32.751719N 79.897581W USA: Charleston\, SC 2018-06-25 sediment 129006137 SAMN16490841 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852800 20947 SRR12852801 AMPLICON PRJNA670253 Saltmarsh 32.751719N 79.897581W USA: Charleston\, SC 2018-06-25 sediment 53317782 SAMN16490840 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852801 21242 SRR12852821 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 3245259 SAMN16490798 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852821 20960 SRR12852824 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 7532218 SAMN16490795 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852824 20961 SRR12852825 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 6606456 SAMN16490794 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852825 20962 SRR12852827 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 9391239 SAMN16490793 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852827 20963 SRR12852829 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 6893521 SAMN16490791 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852829 20964 SRR12852830 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 5896640 SAMN16490790 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852830 21267 SRR12852895 AMPLICON PRJNA670253 Saltmarsh 29.762475N 81.264453W USA: St. Augustine\, FL 2018-06-22 sediment 72453439 SAMN16490825 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852895 21416 SRR12995215 AMPLICON PRJNA666636 Saltmarsh 31.39N 81.2758W USA: Georgia 2018-07-10 Sporobolus alterniflorus sediment 29290587 SAMN16678236 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995215 20643 SRR13379989 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-06 Salt marsh sediment 31864644 SAMN17251871 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13379989 20644 SRR13379990 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-06 Salt marsh sediment 39196071 SAMN17251870 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13379990 20671 SRR13380022 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-08 Salt marsh sediment 87525579 SAMN17251814 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380022 20765 SRR13380131 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2016-05 Salt marsh sediment 45435556 SAMN17251880 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380131 20769 SRR13380135 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 10932703 SAMN17251866 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380135 20770 SRR13380136 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 146555968 SAMN17251865 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380136 15195 SRR14740882 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 75705600 SAMN19581130 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740882 15654 SRR14741344 AMPLICON PRJNA735404 Mangrove 6.456892 N 99.822607 E Malaysia: Langkawi 2017/03/07 Sonneratia alba and Avicennia alba Sediment 64614000 SAMN19580944 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741344 15656 SRR14741346 AMPLICON PRJNA735404 Mangrove 6.456892 N 99.822607 E Malaysia: Langkawi 2017/03/07 Sonneratia alba and Avicennia alba Sediment 41029800 SAMN19580943 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741346 15658 SRR14741348 AMPLICON PRJNA735404 Mangrove 6.456892 N 99.822607 E Malaysia: Langkawi 2017/03/07 Sonneratia alba and Avicennia alba Sediment 59111400 SAMN19580941 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741348 15659 SRR14741349 AMPLICON PRJNA735404 Mangrove 6.456892 N 99.822607 E Malaysia: Langkawi 2017/03/07 Sonneratia alba and Avicennia alba Sediment 62122200 SAMN19580940 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741349 15660 SRR14741350 AMPLICON PRJNA735404 Mangrove 6.456892 N 99.822607 E Malaysia: Langkawi 2017/03/07 Sonneratia alba and Avicennia alba Sediment 58188000 SAMN19580939 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741350 15661 SRR14741351 AMPLICON PRJNA735404 Mangrove 6.456892 N 99.822607 E Malaysia: Langkawi 2017/03/07 Sonneratia alba and Avicennia alba Sediment 50691000 SAMN19580938 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741351 15662 SRR14741352 AMPLICON PRJNA735404 Mangrove 6.456892 N 99.822607 E Malaysia: Langkawi 2017/03/07 Sonneratia alba and Avicennia alba Sediment 87016200 SAMN19580937 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741352 15664 SRR14741354 AMPLICON PRJNA735404 Mangrove 6.456892 N 99.822607 E Malaysia: Langkawi 2017/03/07 Sonneratia alba and Avicennia alba Sediment 52866600 SAMN19580935 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741354 17844 SRR17658361 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 47115733 SAMN25078398 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658361 17730 SRR21290759 AMPLICON PRJNA874575 Mangrove 12.92S 45.15000278 E Mayotte:Malamani 2025/10/18 Mangrove sediment 8439876 SAMN30553756 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR21290759 17744 SRR21290773 AMPLICON PRJNA874575 Mangrove 12.92S 45.15000278 E Mayotte:Malamani 2025/10/18 Mangrove sediment 9206712 SAMN30553764 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR21290773 17986 SRR23945125 AMPLICON PRJNA947804 Mangrove 12.785427S 45.096342 E Mayotte: Zidakani 2025/11/18 marine biofilm Green benthic biofilm 11303890 SAMN33866984 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945125 17988 SRR23945127 AMPLICON PRJNA947804 Mangrove 12.842187S 45.186836 E Mayotte: Dembeni 2025/11/18 marine biofilm Dark-green slimy benthic biofilm 11981888 SAMN33866983 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945127 17989 SRR23945128 AMPLICON PRJNA947804 Mangrove 12.842133S 45.18656 E Mayotte: Dembeni 2025/11/18 marine biofilm Dark-green benthic biofilm 11395879 SAMN33866982 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945128 17990 SRR23945129 AMPLICON PRJNA947804 Mangrove 12.842133S 45.18656 E Mayotte: Dembeni 2025/11/18 marine biofilm Biofilm on a pneumatophore 11878851 SAMN33866981 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945129 17993 SRR23945132 AMPLICON PRJNA947804 Mangrove 12.83774 S 45.190182 E Mayotte: Dembeni 2025/11/18 marine biofilm Biofilm on Rhizopoha 30438897 SAMN33866978 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945132 17997 SRR23945136 AMPLICON PRJNA947804 Mangrove 12.837255S 45.192504 E Mayotte: Dembeni 2025/11/18 marine biofilm Biofilm on a bamboo debris 10917390 SAMN33866974 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945136 16932 SRR25258301 AMPLICON PRJNA994497 Mangrove 16.21 N 61.29 W Guadeloupe 2018/07/19 Mangrove coastal sea water 9859058 SAMN36430095 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR25258301 18482 SRR27644575 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/21 Mangrove soil 13777844 SAMN39505231 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644575 18483 SRR27644576 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 20013540 SAMN39505230 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644576 18487 SRR27644580 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 15338882 SAMN39505227 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644580 18561 SRR27644654 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 4681604 SAMN39505437 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644654 18627 SRR27644720 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 9853354 SAMN39505406 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644720 18674 SRR27644767 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 21850002 SAMN39505306 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644767 15856 SRR5814398 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 49235033 SAMN07338370 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814398 16145 SRR5877388 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 95854776 SAMN06834419 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877388 16407 SRR5880169 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 95854776 SAMN06834419 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880169 21784 SRR7877471 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-08-01 Salt marsh sediment 19758287 SAMN10092102 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877471