# Export date: 2026-06-16 17:48:50 # Microbe: Lutibacter Lutibacter litorisediminis (ID: 6471) # Total amplicons: 66 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22538 ERR3890613 AMPLICON PRJEB36104 Seagrass 38.603381 N 142.883518 E 2016-07-08 Zostera muelleri leaf 36872400 SAMEA6528924 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR3890613 20626 SRR12228836 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 206085000 SAMN10953557 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228836 20905 SRR12852714 AMPLICON PRJNA670253 Saltmarsh 30.3778N 87.83778W USA: Weeks Bay\, AL 2018-06-18 sediment 52065075 SAMN16490918 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852714 20929 SRR12852765 AMPLICON PRJNA670253 Saltmarsh 34.75389N 76.76111W USA: Morehead City\, NC 2018-06-28 sediment 9834079 SAMN16490873 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852765 20932 SRR12852772 AMPLICON PRJNA670253 Saltmarsh 34.06296N 77.88649W USA: Wilmington\, NC 2018-06-27 sediment 7404675 SAMN16490866 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852772 20973 SRR12852842 AMPLICON PRJNA670253 Saltmarsh 29.62861N 85.09056W USA: Apalachicola\, FL 2018-06-20 sediment 5084966 SAMN16490779 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852842 21249 SRR12852843 AMPLICON PRJNA670253 Saltmarsh 29.62861N 85.09056W USA: Apalachicola\, FL 2018-06-20 sediment 3232289 SAMN16490778 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852843 20975 SRR12852846 AMPLICON PRJNA670253 Saltmarsh 29.62861N 85.09056W USA: Apalachicola\, FL 2018-06-20 sediment 5113183 SAMN16490775 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852846 21421 SRR12995221 AMPLICON PRJNA666636 Saltmarsh 31.9728N 81.03062W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 44878800 SAMN16678413 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995221 21424 SRR12995225 AMPLICON PRJNA666636 Saltmarsh 31.9728N 81.0309W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 42564078 SAMN16678411 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995225 21427 SRR12995228 AMPLICON PRJNA666636 Saltmarsh 31.97338N 81.03055W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 40887398 SAMN16678408 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995228 21430 SRR12995232 AMPLICON PRJNA666636 Saltmarsh 31.97367N 81.03113W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 44203108 SAMN16678404 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995232 21515 SRR12995330 AMPLICON PRJNA666636 Saltmarsh 31.9728N 81.03062W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 40081688 SAMN16678391 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995330 21518 SRR12995333 AMPLICON PRJNA666636 Saltmarsh 31.9728N 81.0309W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 45823564 SAMN16678388 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995333 21541 SRR12995357 AMPLICON PRJNA666636 Saltmarsh 31.9728N 81.0309W USA: Georgia 2019-07-22 Sporobolus alterniflorus sediment 41992300 SAMN16678366 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995357 20672 SRR13380023 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2016-05 Salt marsh sediment 5488691 SAMN17251832 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380023 20724 SRR13380081 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 50912233 SAMN17251912 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380081 20755 SRR13380120 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-04 Salt marsh sediment 12264357 SAMN17251949 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380120 22030 SRR22025436 AMPLICON PRJNA893704 Saltmarsh 38.72246N 76.33719W USA: Chesapeake Bay 2019-06-28 Spartina alterniflora peat soil 78555219 SAMN31431894 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025436 22050 SRR22025459 AMPLICON PRJNA893704 Saltmarsh 38.75742N 76.3789W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 133524708 SAMN31431873 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025459 22052 SRR22025461 AMPLICON PRJNA893704 Saltmarsh 38.75742N 76.3789W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 83300808 SAMN31431871 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025461 22058 SRR22025468 AMPLICON PRJNA893704 Saltmarsh 38.76712N 76.38478W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 66709287 SAMN31431829 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025468 22066 SRR22025476 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.37022W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 62624177 SAMN31431857 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025476 22068 SRR22025479 AMPLICON PRJNA893704 Saltmarsh 38.76712N 76.38478W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 65579596 SAMN31431828 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025479 22074 SRR22025485 AMPLICON PRJNA893704 Saltmarsh 38.77079N 76.37722W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 67410558 SAMN31431849 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025485 22083 SRR22025494 AMPLICON PRJNA893704 Saltmarsh 38.77305N 76.37802W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 69600272 SAMN31431841 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025494 22107 SRR23933937 AMPLICON PRJNA925448 Saltmarsh 41.2611N 72.5491W USA: Madison\, Connecticut marsh sediment 133105300 SAMN33188282 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933937 21661 SRR5360886 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2015 Salt marsh sediment 148825846 SAMN06606352 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360886 21949 SRR5486563 AMPLICON PRJNA384656 Saltmarsh 32.5576N 80.4365W USA:South Carolina\,ACE Basin Wildlife Refuge 2010-10-10 salt marsh tidal mudflat 73116802 SAMN06843733 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486563 21950 SRR5486565 AMPLICON PRJNA384656 Saltmarsh 34.7221N 76.6798W USA:North Carolina\,Rachel Carson Reserve 2010-10-08 salt marsh tidal mudflat 49406840 SAMN06843731 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486565 21962 SRR5486578 AMPLICON PRJNA384656 Saltmarsh 32.5576N 80.4365W USA:South Carolina\,ACE Basin Wildlife Refuge 2010-10-10 salt marsh tidal mudflat 72097240 SAMN06843718 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486578 22003 SRR5486626 AMPLICON PRJNA384656 Saltmarsh 41.6249N 71.3228W USA:Rhode Island\,Prudence Island 2010-10-25 salt marsh tidal mudflat 78414910 SAMN06843670 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486626 22012 SRR5486635 AMPLICON PRJNA384656 Saltmarsh 41.5806N 70.5198W USA:Massachusetts\,Waquoit Bay 2010-10-19 salt marsh tidal mudflat 62064268 SAMN06843660 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486635 22023 SRR5486646 AMPLICON PRJNA384656 Saltmarsh 41.5806N 70.5198W USA:Massachusetts\,Waquoit Bay 2010-10-19 salt marsh tidal mudflat 49753722 SAMN06843649 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486646 22790 SRR5675555 AMPLICON PRJNA389390 Seagrass 54.59808 N 13.21117 E Germany:Baltic Sea 2015-08 Zostera marina seawater 19834392 SAMN07197201 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675555 22854 SRR5675619 AMPLICON PRJNA389390 Seagrass 54.55705 N 13.13677 E Germany:Baltic Sea 2015-08 Zostera marina seawater 36711782 SAMN07197189 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675619 22875 SRR5675640 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 78459421 SAMN07197240 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675640 22904 SRR6424045 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914476 E Taiwan 2015-02-15 seagrass rhizosphere 69284180 SAMN08222589 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424045 22909 SRR6424050 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.91446 E Taiwan 2014-01-10 seagrass sediment 59862278 SAMN08222573 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424050 22910 SRR6424051 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914472 E Taiwan 2015-02-15 seagrass sediment 76136746 SAMN08222585 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424051 22142 SRR6761106 AMPLICON PRJNA433990 Saltmarsh 29.86375N 88.841472W USA: Chandeleur Islands 2016-05-24 salt marsh sediment 253239728 SAMN08536647 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761106 21027 SRR8207344 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2015-12-09 Spartina alterniflora sediment 17835023 SAMN10439486 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207344 21029 SRR8207347 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2015-12-09 Spartina alterniflora sediment 11944906 SAMN10439483 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207347 21030 SRR8207348 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2015-12-09 Spartina alterniflora sediment 19997558 SAMN10439482 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207348 21031 SRR8207349 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2015-12-09 Spartina alterniflora sediment 21626666 SAMN10439481 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207349 21033 SRR8207351 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 12231736 SAMN10439476 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207351 21034 SRR8207352 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 16979387 SAMN10439477 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207352 21035 SRR8207353 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 14553505 SAMN10439474 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207353 21036 SRR8207354 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 17359371 SAMN10439475 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207354 21037 SRR8207355 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 17661335 SAMN10439472 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207355 21043 SRR8207361 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 14359792 SAMN10439468 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207361 21045 SRR8207363 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 14587501 SAMN10439466 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207363 21047 SRR8207366 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 15454514 SAMN10439465 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207366 21048 SRR8207367 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 17834695 SAMN10439462 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207367 21050 SRR8207369 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 17521742 SAMN10439460 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207369 21051 SRR8207370 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 20519313 SAMN10439461 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207370 21277 SRR9089761 AMPLICON PRJNA543559 Saltmarsh 30.97N 121.95E China:Shanghai 2017-06 salt marsh soil 41755322 SAMN11774855 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089761 21278 SRR9089762 AMPLICON PRJNA543559 Saltmarsh 30.97N 121.95E China:Shanghai 2017-03 salt marsh soil 35118272 SAMN11774854 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089762 21280 SRR9089764 AMPLICON PRJNA543559 Saltmarsh 30.89N 121.97E China:Shanghai 2017-12 salt marsh soil 42992432 SAMN11774861 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089764 21283 SRR9089767 AMPLICON PRJNA543559 Saltmarsh 30.89N 121.97E China:Shanghai 2018-12 salt marsh soil 25967872 SAMN11774872 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089767 21285 SRR9089771 AMPLICON PRJNA543559 Saltmarsh 30.87N 121.94E China:Shanghai 2017-03 salt marsh soil 38112620 SAMN11774862 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089771 21289 SRR9089775 AMPLICON PRJNA543559 Saltmarsh 30.88N 121.97E China:Shanghai 2017-03 salt marsh soil 33409194 SAMN11774866 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089775 21292 SRR9089778 AMPLICON PRJNA543559 Saltmarsh 30.89N 121.97E China:Shanghai 2018-07 salt marsh soil 43555302 SAMN11774871 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089778 21293 SRR9089779 AMPLICON PRJNA543559 Saltmarsh 30.89N 121.97E China:Shanghai 2018-03 salt marsh soil 43419852 SAMN11774870 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089779