# Export date: 2026-06-17 01:56:45 # Microbe: Paucihalobacter Paucihalobacter ruber (ID: 6620) # Total amplicons: 63 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 15811 SRR11296461 AMPLICON PRJNA612127 Mangrove 6.8494 N 101.0166 E Thailand 2018/04/01 Avicennia officinalis and Rhizophora apiculata Blume rhizosphere of mangrove tree 45252322 SAMN14363801 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11296461 23747 SRR18298268 AMPLICON PRJNA774145 Seagrass 19.51159 N 85.14737 E India 2018-04-21 seagrass sediment 16889876 SAMN22568717 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298268 23748 SRR18298269 AMPLICON PRJNA774145 Seagrass 19.51159 N 85.14737 E India 2018-04-21 seagrass sediment 6418088 SAMN22568716 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298269 23749 SRR18298270 AMPLICON PRJNA774145 Seagrass 19.51159 N 85.14737 E India 2018-04-21 seagrass sediment 24239560 SAMN22568715 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298270 23750 SRR18298271 AMPLICON PRJNA774145 Seagrass 19.51159 N 85.14857 E India 2018-04-21 seagrass sediment 8130094 SAMN22568714 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298271 23755 SRR18298276 AMPLICON PRJNA774145 Seagrass 19.58034 N 85.17946 E India 2018-04-14 seagrass sediment 29525402 SAMN22568628 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298276 23756 SRR18298277 AMPLICON PRJNA774145 Seagrass 19.51159 N 85.14857 E India 2018-04-21 seagrass sediment 14701994 SAMN22568709 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298277 23758 SRR18298279 AMPLICON PRJNA774145 Seagrass 19.5115 N 85.15176 E India 2018-04-21 seagrass sediment 13304749 SAMN22568707 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298279 23767 SRR18298288 AMPLICON PRJNA774145 Seagrass 19.51165 N 85.15301 E India 2018-04-21 seagrass sediment 18660166 SAMN22568699 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298288 23769 SRR18298290 AMPLICON PRJNA774145 Seagrass 19.51165 N 85.15301 E India 2018-04-21 seagrass sediment 17312643 SAMN22568697 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298290 23770 SRR18298291 AMPLICON PRJNA774145 Seagrass 19.51136 N 85.15342 E India 2018-04-21 seagrass sediment 6472615 SAMN22568696 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298291 23773 SRR18298294 AMPLICON PRJNA774145 Seagrass 19.51136 N 85.15342 E India 2018-04-21 seagrass sediment 15044448 SAMN22568693 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298294 23775 SRR18298296 AMPLICON PRJNA774145 Seagrass 19.51136 N 85.15342 E India 2018-04-21 seagrass sediment 17950304 SAMN22568691 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298296 23783 SRR18298304 AMPLICON PRJNA774145 Seagrass 19.56453 N 85.18694 E India 2018-04-14 seagrass sediment 7389865 SAMN22568684 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298304 23788 SRR18298309 AMPLICON PRJNA774145 Seagrass 19.58034 N 85.17946 E India 2018-04-14 seagrass sediment 9200111 SAMN22568625 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298309 23794 SRR18298315 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18677 E India 2018-04-14 seagrass sediment 28355721 SAMN22568674 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298315 23804 SRR18298325 AMPLICON PRJNA774145 Seagrass 19.5638 N 85.18625 E India 2018-04-14 seagrass sediment 20024718 SAMN22568665 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298325 23836 SRR18298357 AMPLICON PRJNA774145 Seagrass 19.580555 N 85.169592 E India 2018-04-26 seagrass sediment 21163853 SAMN22568771 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298357 23853 SRR18298374 AMPLICON PRJNA774145 Seagrass 19.57435 N 85.18212 E India 2018-04-14 seagrass sediment 46391526 SAMN22568651 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298374 23862 SRR18298383 AMPLICON PRJNA774145 Seagrass 19.51136 N 85.15342 E India 2018-04-21 seagrass sediment 14590818 SAMN22568860 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298383 23866 SRR18298387 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18679 E India 2018-04-14 seagrass sediment 19169404 SAMN22568837 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298387 23874 SRR18298395 AMPLICON PRJNA774145 Seagrass 19.51136 N 85.15342 E India 2018-04-21 seagrass sediment 10306560 SAMN22568849 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298395 23876 SRR18298397 AMPLICON PRJNA774145 Seagrass 19.51136 N 85.15342 E India 2018-04-21 seagrass sediment 13701925 SAMN22568848 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298397 23877 SRR18298398 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18679 E India 2018-04-14 seagrass sediment 5941179 SAMN22568847 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298398 23878 SRR18298399 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18679 E India 2018-04-14 seagrass sediment 7759970 SAMN22568846 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298399 23881 SRR18298402 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18679 E India 2018-04-14 seagrass sediment 7274527 SAMN22568843 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298402 23887 SRR18298408 AMPLICON PRJNA774145 Seagrass 19.57892 N 85.18026 E India 2018-04-14 seagrass sediment 20937775 SAMN22568639 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298408 23889 SRR18298410 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18679 E India 2018-04-14 seagrass sediment 12331349 SAMN22568836 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298410 23890 SRR18298411 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18679 E India 2018-04-14 seagrass sediment 16722500 SAMN22568835 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298411 23891 SRR18298412 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18679 E India 2018-04-14 seagrass sediment 4722787 SAMN22568834 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298412 23895 SRR18298416 AMPLICON PRJNA774145 Seagrass 19.56282 N 85.18651 E India 2018-04-14 seagrass sediment 5170832 SAMN22568830 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298416 23902 SRR18298423 AMPLICON PRJNA774145 Seagrass 19.56282 N 85.18651 E India 2018-04-14 seagrass sediment 12959081 SAMN22568825 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298423 23903 SRR18298424 AMPLICON PRJNA774145 Seagrass 19.56282 N 85.18651 E India 2018-04-14 seagrass sediment 11995486 SAMN22568824 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298424 23924 SRR18298445 AMPLICON PRJNA774145 Seagrass 19.586377 N 85.168426 E India 2018-04-26 seagrass sediment 17095418 SAMN22568767 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298445 23931 SRR18298452 AMPLICON PRJNA774145 Seagrass 19.57979 N 85.17962 E India 2018-04-14 seagrass sediment 27434841 SAMN22568633 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298452 23948 SRR18298469 AMPLICON PRJNA774145 Seagrass 19.5116 N 85.15327 E India 2018-04-21 seagrass sediment 16881012 SAMN22568728 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298469 23949 SRR18298470 AMPLICON PRJNA774145 Seagrass 19.5116 N 85.15327 E India 2018-04-21 seagrass sediment 13161873 SAMN22568729 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298470 23954 SRR18298475 AMPLICON PRJNA774145 Seagrass 19.5116 N 85.15327 E India 2018-04-21 seagrass sediment 6005944 SAMN22568733 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298475 23967 SRR18298488 AMPLICON PRJNA774145 Seagrass 19.5113 N 85.14544 E India 2018-04-21 seagrass sediment 15940423 SAMN22568722 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298488 23970 SRR18298491 AMPLICON PRJNA774145 Seagrass 19.5113 N 85.14544 E India 2018-04-21 seagrass sediment 13907901 SAMN22568725 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298491 23971 SRR18298492 AMPLICON PRJNA774145 Seagrass 19.5113 N 85.14544 E India 2018-04-21 seagrass sediment 8739679 SAMN22568726 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298492 23972 SRR18298493 AMPLICON PRJNA774145 Seagrass 19.5116 N 85.15327 E India 2018-04-21 seagrass sediment 12507265 SAMN22568727 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298493 24093 SRR21686199 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass surrounding_water 71742928 SAMN30916025 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686199 24094 SRR21686200 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass surrounding_water 61495034 SAMN30916024 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686200 24095 SRR21686201 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass surrounding_water 61455130 SAMN30916023 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686201 24096 SRR21686202 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass surrounding_water 72800802 SAMN30916022 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686202 24097 SRR21686203 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass surrounding_water 67355650 SAMN30916021 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686203 22784 SRR5675549 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 30443461 SAMN07197195 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675549 22787 SRR5675552 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 32450226 SAMN07197198 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675552 22823 SRR5675588 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 18917767 SAMN07197218 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675588 22825 SRR5675590 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 20472014 SAMN07197216 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675590 22827 SRR5675592 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 13665110 SAMN07197214 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675592 21277 SRR9089761 AMPLICON PRJNA543559 Saltmarsh 30.97N 121.95E China:Shanghai 2017-06 salt marsh soil 41755322 SAMN11774855 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089761 16611 SRR9593075 AMPLICON PRJNA550512 Mangrove 6.8328889 N 101.000333 E Thailand 2018/07/31 Mud estuarine mud 54210723 SAMN12124994 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593075 16612 SRR9593076 AMPLICON PRJNA550512 Mangrove 6.8328889 N 101.000333 E Thailand 2018/04/01 Mud estuarine mud 56355281 SAMN12124993 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593076 16625 SRR9593089 AMPLICON PRJNA550512 Mangrove 6.8487778 N 101.00833 E Thailand 2018/04/01 Mud estuarine mud 55709593 SAMN12124990 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593089 16647 SRR9593111 AMPLICON PRJNA550512 Mangrove 6.8878333 N 101.01066 E Thailand 2018/04/01 Mud estuarine mud 69234680 SAMN12124972 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593111 16655 SRR9593119 AMPLICON PRJNA550512 Mangrove 6.89094 N 101.004166 E Thailand 2017/12/04 Mud estuarine mud 50110379 SAMN12124974 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593119 16660 SRR9593124 AMPLICON PRJNA550512 Mangrove 6.8487778 N 101.00833 E Thailand 2018/07/31 Mud estuarine mud 56031800 SAMN12124991 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593124 16661 SRR9593125 AMPLICON PRJNA550512 Mangrove 6.8948333 N 100.991777 E Thailand 2018/07/31 Mud estuarine mud 28486331 SAMN12124970 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593125 16664 SRR9593128 AMPLICON PRJNA550512 Mangrove 6.8487778 N 101.00833 E Thailand 2018/04/01 Mud estuarine mud 45996645 SAMN12124990 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593128 16681 SRR9593145 AMPLICON PRJNA550512 Mangrove 6.89094 N 101.004166 E Thailand 2018/04/01 Mud estuarine mud 31954362 SAMN12124975 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593145 16683 SRR9593147 AMPLICON PRJNA550512 Mangrove 6.89094 N 101.004166 E Thailand 2018/04/01 Mud estuarine mud 52471313 SAMN12124975 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593147