# Export date: 2026-06-14 16:30:57 # Microbe: Sulfurimonas Sulfurimonas denitrificans (ID: 6911) # Total amplicons: 24 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22448 DRR403360 AMPLICON PRJDB14309 Seagrass 35.315753 N 139.789322 E Japan:Chiba\, Futsu 2019-07-04 seagrass Seagrass root 78894840 SAMD00532446 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403360 22470 DRR403385 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass leaf 69328861 SAMD00532471 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403385 22479 DRR403394 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass root 76951296 SAMD00532480 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403394 22556 ERR7421898 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 39044668 SAMEA11293275 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421898 22604 ERR7421946 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 18823022 SAMEA11293323 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421946 22619 ERR7421961 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 8841726 SAMEA11293338 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421961 22627 ERR7421969 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 23498685 SAMEA11293346 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421969 22667 ERR7422009 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 19849791 SAMEA11293386 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7422009 22671 ERR7422013 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 20891283 SAMEA11293390 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7422013 22672 ERR7422014 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 22148271 SAMEA11293391 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7422014 21162 SRR11233085 AMPLICON PRJNA602775 Saltmarsh 41.7129N 69.9956W USA: Harwich\, MA Muddy Creek Marsh 2015-08-19 sediment 27178479 SAMN13950645 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233085 20619 SRR12228814 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 61578500 SAMN10953559 PAIRED Illumina MiSeq METAGENOMIC ITS https://www.ncbi.nlm.nih.gov/sra/SRR12228814 20627 SRR12228837 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 106605500 SAMN10953574 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228837 20628 SRR12228838 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 47792000 SAMN10953573 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228838 20629 SRR12228839 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 59373500 SAMN10953572 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228839 17725 SRR14181435 AMPLICON PRJNA720541 Mangrove 21.9594 S 113.9466 E Australia:Exmouth 2018/06/16 Mangrove sediment/soil 85406826 SAMN18661245 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14181435 18901 SRR18349726 AMPLICON PRJNA817083 Mangrove 24.4 N 67.1 E Pakistan: Lasbela 2019/11/15 Mangrove mangrove sediments 127710185 SAMN26747205 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349726 22107 SRR23933937 AMPLICON PRJNA925448 Saltmarsh 41.2611N 72.5491W USA: Madison\, Connecticut marsh sediment 133105300 SAMN33188282 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933937 24361 SRR25047730 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere oxic area 46129454 SAMN36015151 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047730 24399 SRR25047782 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere high hydrogen sulphide area 43385538 SAMN36015155 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047782 24401 SRR25047784 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere oxic area 37351692 SAMN36015153 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047784 22237 SRR27176417 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 26375472 SAMN38763989 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176417 22133 SRR6761095 AMPLICON PRJNA433990 Saltmarsh 29.927599N 88.829308W USA: Chandeleur Islands 2017-02-23 salt marsh sediment 273563248 SAMN08536657 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761095 22144 SRR6761108 AMPLICON PRJNA433990 Saltmarsh 29.927611N 88.829306W USA: Chandeleur Islands 2017-02-23 salt marsh sediment 270133052 SAMN08536663 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761108