# Export date: 2026-06-12 06:47:34 # Microbe: Sulfurospirillum_A Sulfurospirillum_A arcachonense (ID: 6917) # Total amplicons: 36 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22447 DRR403359 AMPLICON PRJDB14309 Seagrass 35.315753 N 139.789322 E Japan:Chiba\, Futsu 2019-07-04 seagrass Seagrass root 74602353 SAMD00532445 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403359 22448 DRR403360 AMPLICON PRJDB14309 Seagrass 35.315753 N 139.789322 E Japan:Chiba\, Futsu 2019-07-04 seagrass Seagrass root 78894840 SAMD00532446 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403360 22449 DRR403361 AMPLICON PRJDB14309 Seagrass 35.315753 N 139.789322 E Japan:Chiba\, Futsu 2019-07-04 seagrass Seagrass root 84382521 SAMD00532447 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403361 22472 DRR403387 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass leaf 63726908 SAMD00532473 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403387 22479 DRR403394 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass root 76951296 SAMD00532480 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403394 22481 DRR403396 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass root 82588388 SAMD00532482 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403396 22603 ERR7421945 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 20789538 SAMEA11293322 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421945 22643 ERR7421985 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 10089196 SAMEA11293362 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421985 19829 SRR10092961 AMPLICON PRJNA564581 Seaweed 54.48583333N 8.8125E Germany 2017/09/20 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 9699565 SAMN12716497 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092961 19872 SRR10093004 AMPLICON PRJNA564581 Seaweed 37.957186N 75.024576W USA 2017/09/08 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 47961996 SAMN12716580 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10093004 20590 SRR12125065 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 75842319 SAMN15414956 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125065 23685 SRR12233907 AMPLICON PRJNA646607 Seagrass 37.35 N 122.57 E China:Rongcheng 2019-09-23 zostera marina seawater 44844786 SAMN15547886 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12233907 23688 SRR12233910 AMPLICON PRJNA646607 Seagrass 37.35 N 122.57 E China:Rongcheng 2019-09-23 zostera japonica sediment 42177926 SAMN15547883 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12233910 21268 SRR12852899 AMPLICON PRJNA670253 Saltmarsh 29.762475N 81.264453W USA: St. Augustine\, FL 2018-06-22 sediment 40890388 SAMN16490822 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852899 19220 SRR13741159 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/06 Seawater 65834968 SAMN16984766 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741159 19231 SRR13741170 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/07 Seawater 53624017 SAMN16984760 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741170 19329 SRR13741752 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/06 Laminaria setchellii algal material 32892246 SAMN16989038 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741752 19351 SRR13741774 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/07 Laminaria setchellii algal material 18352556 SAMN16989018 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741774 24001 SRR19242031 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-04 seagrass seawater 34635500 SAMN28462895 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242031 20543 SRR19745563 AMPLICON PRJNA850096 Seaweed China:Putian 2020/05/15 after seaweed culture estuarine water 55112280 SAMN29155045 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745563 24105 SRR23715691 AMPLICON PRJNA925291 Seagrass 33.066004 S 151.54654 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 114309420 SAMN33555435 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715691 24107 SRR23715693 AMPLICON PRJNA925291 Seagrass 33.109617 S 151.564129 E Australia: Sunshine 2020-09-07 Zostera muelleri Estuarine sediment 91390950 SAMN33555437 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715693 24114 SRR23715700 AMPLICON PRJNA925291 Seagrass 33.089491 S 151.549131 E Australia: Balcolyn 2020-09-08 Zostera muelleri Estuarine sediment 130826164 SAMN33555412 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715700 24400 SRR25047783 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere high hydrogen sulphide area 38582180 SAMN36015154 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047783 22695 SRR26898554 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass root 42138500 SAMN38338624 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898554 22705 SRR26898564 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass root 42323000 SAMN38338628 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898564 22706 SRR26898565 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass leaf 40566500 SAMN38338627 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898565 22708 SRR26898567 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass root 41750500 SAMN38338617 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898567 20037 SRR4105472 AMPLICON PRJNA338162 Seaweed 23.4681N 117.1006E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 sediment 45066548 SAMN05521718 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105472 22783 SRR5675548 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 18096643 SAMN07197194 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675548 22821 SRR5675586 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 33486725 SAMN07197220 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675586 22822 SRR5675587 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 24860409 SAMN07197221 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675587 22849 SRR5675614 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 36859613 SAMN07197233 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675614 22878 SRR5675643 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 35494043 SAMN07197235 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675643 23021 SRR7633218 AMPLICON PRJNA483963 Seagrass 32.68 N 117.22 W USA: San Diego\, CA. 2017-07-03 seagrass seawater 42862256 SAMN09754527 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR7633218 23028 SRR7828603 AMPLICON PRJNA490600 Seagrass NA China:Bohai Bay 2018-04-20 seagrass sediment 21632870 SAMN10053381 SINGLE Illumina HiSeq 3000 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR7828603