# Export date: 2026-06-15 12:06:22 # Microbe: Dehalogenimonas Dehalogenimonas alkenigignens (ID: 6973) # Total amplicons: 42 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 15803 SRR11296451 AMPLICON PRJNA612127 Mangrove 6.8494 N 101.0166 E Thailand 2018/04/01 Avicennia officinalis and Rhizophora apiculata Blume rhizosphere of mangrove tree 49687802 SAMN14363798 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11296451 15804 SRR11296452 AMPLICON PRJNA612127 Mangrove 6.8494 N 101.0166 E Thailand 2018/04/01 Avicennia officinalis and Rhizophora apiculata Blume rhizosphere of mangrove tree 56671453 SAMN14363798 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11296452 15805 SRR11296453 AMPLICON PRJNA612127 Mangrove 6.8494 N 101.0166 E Thailand 2018/04/01 Avicennia officinalis and Rhizophora apiculata Blume rhizosphere of mangrove tree 45235278 SAMN14363798 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11296453 15806 SRR11296454 AMPLICON PRJNA612127 Mangrove 6.8494 N 101.0166 E Thailand 2018/04/01 Avicennia officinalis and Rhizophora apiculata Blume rhizosphere of mangrove tree 30783277 SAMN14363797 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11296454 15807 SRR11296455 AMPLICON PRJNA612127 Mangrove 6.8494 N 101.0166 E Thailand 2018/04/01 Avicennia officinalis and Rhizophora apiculata Blume rhizosphere of mangrove tree 37197521 SAMN14363797 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11296455 15808 SRR11296456 AMPLICON PRJNA612127 Mangrove 6.8494 N 101.0166 E Thailand 2018/04/01 Avicennia officinalis and Rhizophora apiculata Blume rhizosphere of mangrove tree 45231963 SAMN14363797 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11296456 15812 SRR11296462 AMPLICON PRJNA612127 Mangrove 6.8494 N 101.0166 E Thailand 2018/04/01 Avicennia officinalis and Rhizophora apiculata Blume rhizosphere of mangrove tree 280809260 SAMN14363801 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11296462 16700 SRR11930137 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 1010770215 SAMN15143747 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930137 16701 SRR11930138 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 674363154 SAMN15143746 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930138 16702 SRR11930139 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 985302685 SAMN15143745 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930139 16693 SRR12070301 AMPLICON PRJNA640402 Mangrove China:Shenzhen 2019/01/12 Mangrove soil sample 93116750 SAMN15317501 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12070301 16695 SRR12070303 AMPLICON PRJNA640402 Mangrove China:Shenzhen 2019/01/12 Mangrove soil sample 92458945 SAMN15317499 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12070303 16741 SRR12070304 AMPLICON PRJNA640402 Mangrove China:Shenzhen 2018/07/17 Mangrove soil sample 94679342 SAMN15317498 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12070304 16743 SRR12070306 AMPLICON PRJNA640402 Mangrove China:Shenzhen 2018/07/17 Mangrove soil sample 98654223 SAMN15317496 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12070306 16696 SRR12070308 AMPLICON PRJNA640402 Mangrove China:Shenzhen 2019/01/12 Mangrove soil sample 95056376 SAMN15317504 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12070308 16690 SRR12081866 AMPLICON PRJNA641273 Mangrove China:Shenzhen 2018/07/17 Mangrove soil sample 73674223 SAMN15351026 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12081866 15025 SRR12164892 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 86589123 SAMN15447457 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164892 14967 SRR12164897 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 84254830 SAMN15447452 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164897 14969 SRR12164899 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 94159904 SAMN15447450 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164899 14971 SRR12164901 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 87558429 SAMN15447448 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164901 14973 SRR12164903 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 98566801 SAMN15447447 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164903 14974 SRR12164904 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 97331435 SAMN15447446 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164904 14975 SRR12164905 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 92249565 SAMN15447445 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164905 14976 SRR12164906 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 87681007 SAMN15447444 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164906 14977 SRR12164907 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 94030081 SAMN15447443 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164907 15028 SRR12164910 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 102520160 SAMN15447440 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164910 15029 SRR12164911 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 92734146 SAMN15447439 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164911 18979 SRR13958799 AMPLICON PRJNA713958 Mangrove China: Hainan island 2025/12/17 Mangrove/intertidal mudflats mangrove forest and intertidal mudflats sediments 19899500 SAMN18275841 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13958799 18985 SRR13958805 AMPLICON PRJNA713958 Mangrove China: Hainan island 2025/12/17 Mangrove/intertidal mudflats mangrove forest and intertidal mudflats sediments 28822500 SAMN18275835 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13958805 22173 SRR27176349 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal typha marsh soil 58424920 SAMN38763866 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176349 22179 SRR27176355 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal typha marsh soil 79931246 SAMN38763864 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176355 22223 SRR27176402 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal typha marsh soil 40734364 SAMN38763877 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176402 22264 SRR27176449 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal typha marsh soil 64196744 SAMN38763865 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176449 22284 SRR27176474 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal typha marsh soil 65563898 SAMN38763861 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176474 18138 SRR28477587 AMPLICON PRJNA1089480 Mangrove 15.511852S 73.8626 E India 2023/09/12 Mangrove mangrove sediment 67123424 SAMN40540545 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28477587 16948 SRR8157626 AMPLICON PRJNA503486 Mangrove 11.5592 N 72.8873 W Colombia: Guajira 2017/04/25 Mangrove mangrove soil 52178350 SAMN10361646 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR8157626 16950 SRR8157628 AMPLICON PRJNA503486 Mangrove 11.5592 N 72.8873 W Colombia: Guajira 2017/04/25 Mangrove mangrove soil 43893626 SAMN10361644 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR8157628 15125 SRR9213685 AMPLICON PRJNA543557 Mangrove 9.59 N 76.11 E India:Mangalavanam Mangroves 2017/10/01 Puthuvype and Mangalavanam Sediment samples are collected from Mangalavanam mangrove region 184626200 SAMN11772330 PAIRED Illumina HiSeq 4000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9213685 16608 SRR9593072 AMPLICON PRJNA550512 Mangrove 6.8700833 N 100.969027 E Thailand 2018/07/31 Mud estuarine mud 33880016 SAMN12124985 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593072 16623 SRR9593087 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2017/12/04 Mud estuarine mud 85553827 SAMN12124986 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593087 16659 SRR9593123 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2018/07/31 Mud estuarine mud 61379884 SAMN12124988 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593123 16662 SRR9593126 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2018/07/31 Mud estuarine mud 15839672 SAMN12124988 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593126