# Export date: 2026-06-15 12:06:21 # Microbe: Limnothrix Limnothrix sp001693275 (ID: 7003) # Total amplicons: 43 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22571 ERR7421913 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 23575987 SAMEA11293290 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421913 15799 SRR11310767 AMPLICON PRJNA612579 Mangrove 21.5 N 111.01 E China: Dianbai 2019/04/25 mangrove mangrove soil 27362228 SAMN14377370 PAIRED Illumina MiniSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11310767 19897 SRR12033709 AMPLICON PRJNA639819 Seaweed 43N 6.11E France: Porquerolles island north 2017/04/01 Taonia atomaria Seawater 13228533 SAMN15250186 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033709 20631 SRR12228842 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 42956000 SAMN10953569 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228842 20635 SRR12228847 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 12300500 SAMN10953556 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228847 15012 SRR13291674 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root-associated soil 27362228 SAMN17075130 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291674 17595 SRR14181337 AMPLICON PRJNA720541 Mangrove 22.4949 S 114.3362 E Australia:Exmouth 2018/06/14 Mangrove sediment/soil 79318713 SAMN18661251 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14181337 15593 SRR14741283 AMPLICON PRJNA735404 Mangrove 2.408307 N 101.858851 E Malaysia: Port Dickson 2017/03/07 Sonneratia alba and Avicennia alba Sediment 62618400 SAMN19581228 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741283 17846 SRR17658363 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 41518893 SAMN25078396 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658363 18272 SRR25047385 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 plastic plastic 57617420 SAMN36011514 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047385 18303 SRR25047416 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 plastic plastic 48805344 SAMN36011508 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047416 18310 SRR25047423 AMPLICON PRJNA988256 Mangrove 1.4450 N 103.7335 E Singapore: Sungei Buloh Wetland Reserve 2021/07/27 plastic plastic 98973014 SAMN36011645 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047423 18314 SRR25047427 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 plastic plastic 60336654 SAMN36011507 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047427 18356 SRR25047469 AMPLICON PRJNA988256 Mangrove 1.3802 N 103.9486 E Singapore: Pasir Ris Park 2021/08/13 sediment sediment 50626996 SAMN36011603 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047469 18375 SRR25047488 AMPLICON PRJNA988256 Mangrove 1.4459 N 103.7078 E Singapore: Lim Chu Kang 2021/07/28 plastic plastic 73091228 SAMN36011554 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047488 18377 SRR25047490 AMPLICON PRJNA988256 Mangrove 1.4459 N 103.7078 E Singapore: Lim Chu Kang 2021/07/28 plastic plastic 43699180 SAMN36011552 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047490 18428 SRR27644521 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/21 Mangrove soil 14289432 SAMN39505470 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644521 18436 SRR27644529 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 15335258 SAMN39505463 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644529 18447 SRR27644540 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/21 Mangrove soil 4696100 SAMN39505453 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644540 18457 SRR27644550 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 15265798 SAMN39505254 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644550 18461 SRR27644554 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/23 Mangrove soil 19329510 SAMN39505250 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644554 18464 SRR27644557 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/23 Mangrove soil 18839364 SAMN39505248 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644557 18466 SRR27644559 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 14161082 SAMN39505246 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644559 18488 SRR27644581 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 20672504 SAMN39505474 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644581 18542 SRR27644635 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/23 Mangrove soil 10454334 SAMN39505264 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644635 18549 SRR27644642 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/21 Mangrove soil 13750060 SAMN39505258 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644642 18552 SRR27644645 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 13469804 SAMN39505255 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644645 18582 SRR27644675 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/21 Mangrove soil 12625412 SAMN39505418 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644675 18588 SRR27644681 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/23 Mangrove soil 25882910 SAMN39505355 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644681 18649 SRR27644742 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/21 Mangrove soil 11296914 SAMN39505212 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644742 18652 SRR27644745 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 20197156 SAMN39505326 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644745 18653 SRR27644746 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 13690868 SAMN39505325 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644746 18679 SRR27644772 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 17735252 SAMN39505301 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644772 20515 SRR27942831 AMPLICON PRJNA1074237 Seaweed 33.056N 35.1019E Israel: Achziv littoral 2022/05/26 Sarconema sp. host associated 18288760 SAMN39854491 PAIRED Illumina MiniSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27942831 16237 SRR5879012 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 50086950 SAMN06834751 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5879012 16253 SRR5879028 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 93108664 SAMN06834728 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5879028 16254 SRR5879029 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 27837308 SAMN06834727 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5879029 16255 SRR5879030 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 20615224 SAMN06834722 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5879030 16306 SRR5879082 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 90767479 SAMN06834739 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5879082 21878 SRR6371048 AMPLICON PRJNA422172 Saltmarsh 37.79N 119.13E China 2017-10-04 Salt marsh soils 29576862 SAMN08166671 PAIRED Illumina MiniSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR6371048 21881 SRR6371051 AMPLICON PRJNA422172 Saltmarsh 37.79N 119.1E China 2017-10-04 Salt marsh soils 28238014 SAMN08166674 PAIRED Illumina MiniSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR6371051 21882 SRR6371052 AMPLICON PRJNA422172 Saltmarsh 37.79N 119.11E China 2017-10-04 Salt marsh soils 28623294 SAMN08166675 PAIRED Illumina MiniSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR6371052 21884 SRR6371054 AMPLICON PRJNA422172 Saltmarsh 37.79N 119.14E China 2017-10-04 Salt marsh soils 33318894 SAMN08166673 PAIRED Illumina MiniSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR6371054