# Export date: 2026-06-15 00:28:33 # Microbe: Calothrix Calothrix sp000317435 (ID: 7057) # Total amplicons: 57 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 20822 SRR11232924 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9956W USA: Harwich\, MA Muddy Creek Marsh 2017-08 sediment 11799347 SAMN13950602 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11232924 20841 SRR11233081 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9957W USA: Harwich\, MA Muddy Creek Marsh 2016-08-25 sediment 18418866 SAMN13950649 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233081 20842 SRR11233082 AMPLICON PRJNA602775 Saltmarsh 41.7124N 69.9959W USA: Harwich\, MA Muddy Creek Marsh 2016-08-25 sediment 24208563 SAMN13950648 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233082 20853 SRR11233103 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9957W USA: Harwich\, MA Muddy Creek Marsh 2016-10-12 sediment 7949486 SAMN13950542 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233103 21386 SRR11233104 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9957W USA: Harwich\, MA Muddy Creek Marsh 2017-08 sediment 20462341 SAMN13950541 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233104 21267 SRR12852895 AMPLICON PRJNA670253 Saltmarsh 29.762475N 81.264453W USA: St. Augustine\, FL 2018-06-22 sediment 72453439 SAMN16490825 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852895 21512 SRR12995327 AMPLICON PRJNA666636 Saltmarsh 31.97283N 81.0304W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 35786074 SAMN16678393 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995327 21543 SRR12995359 AMPLICON PRJNA666636 Saltmarsh 31.97338N 81.03055W USA: Georgia 2019-07-22 Sporobolus alterniflorus sediment 40822138 SAMN16678364 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995359 15174 SRR14740861 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 108997800 SAMN19581149 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740861 15176 SRR14740863 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 106847400 SAMN19581147 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740863 15177 SRR14740864 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 104609400 SAMN19581146 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740864 15178 SRR14740865 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 105283200 SAMN19581145 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740865 15182 SRR14740869 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 76327800 SAMN19581142 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740869 15183 SRR14740870 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 123038400 SAMN19581141 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740870 15416 SRR14741104 AMPLICON PRJNA735404 Mangrove 2.781230 N 104.206822 E Malaysia: Tioman 2017/03/07 Sonneratia alba and Avicennia alba Sediment 61728600 SAMN19581389 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741104 15547 SRR14741237 AMPLICON PRJNA735404 Mangrove 6.456892 N 99.822607 E Malaysia: Langkawi 2017/03/07 Sonneratia alba and Avicennia alba Sediment 76476600 SAMN19581269 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741237 15550 SRR14741240 AMPLICON PRJNA735404 Mangrove 6.456892 N 99.822607 E Malaysia: Langkawi 2017/03/07 Sonneratia alba and Avicennia alba Sediment 70788600 SAMN19581266 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741240 15672 SRR14741362 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 46039200 SAMN19581516 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741362 15674 SRR14741364 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 67225800 SAMN19581514 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741364 15676 SRR14741366 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 62523000 SAMN19581513 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741366 15677 SRR14741367 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 64459800 SAMN19581512 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741367 15679 SRR14741369 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 63499800 SAMN19581510 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741369 23744 SRR15068654 AMPLICON PRJNA744715 Seagrass 37.2 N 122.34 E China:Weihai 2019-06 Zostera japonica sediment 274471687 SAMN20115022 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15068654 18208 SRR25047321 AMPLICON PRJNA988256 Mangrove 1.2263 N 103.7478 E Singapore: Pulau Hantu Besar 2021/07/29 plastic plastic 68295094 SAMN36011577 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047321 18279 SRR25047392 AMPLICON PRJNA988256 Mangrove 1.2155 N 103.8320 E Singapore: Small Sister's Island 2021/08/12 plastic plastic 62754888 SAMN36011705 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047392 18406 SRR25047519 AMPLICON PRJNA988256 Mangrove 1.2198 N 103.8506 E Singapore: Bendera Bay 2021/08/11 plastic plastic 63409262 SAMN36011493 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047519 16931 SRR25258300 AMPLICON PRJNA994497 Mangrove 16.20 N 61.27 W Guadeloupe 2018/07/19 Mangrove coastal sea water 10488177 SAMN36430096 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR25258300 22781 SRR5675546 AMPLICON PRJNA389390 Seagrass 54.59808 N 13.21117 E Germany:Baltic Sea 2015-08 Zostera marina seawater 17599324 SAMN07197202 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675546 22782 SRR5675547 AMPLICON PRJNA389390 Seagrass 54.59808 N 13.21117 E Germany:Baltic Sea 2015-08 Zostera marina seawater 12467158 SAMN07197203 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675547 22783 SRR5675548 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 18096643 SAMN07197194 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675548 22784 SRR5675549 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 30443461 SAMN07197195 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675549 22785 SRR5675550 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10519130 SAMN07197196 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675550 22786 SRR5675551 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10473549 SAMN07197197 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675551 22787 SRR5675552 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 32450226 SAMN07197198 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675552 22789 SRR5675554 AMPLICON PRJNA389390 Seagrass 54.59808 N 13.21117 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10442792 SAMN07197200 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675554 22790 SRR5675555 AMPLICON PRJNA389390 Seagrass 54.59808 N 13.21117 E Germany:Baltic Sea 2015-08 Zostera marina seawater 19834392 SAMN07197201 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675555 22801 SRR5675566 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 8392860 SAMN07197209 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675566 22803 SRR5675568 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 5407483 SAMN07197211 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675568 22804 SRR5675569 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 737382 SAMN07197210 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675569 22805 SRR5675570 AMPLICON PRJNA389390 Seagrass 54.61305 N 13.17829 E Germany:Baltic Sea 2015-08 Zostera marina seawater 19930464 SAMN07197205 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675570 22809 SRR5675574 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10623320 SAMN07197213 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675574 22810 SRR5675575 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 11522743 SAMN07197212 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675575 22823 SRR5675588 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 18917767 SAMN07197218 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675588 22825 SRR5675590 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 20472014 SAMN07197216 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675590 22826 SRR5675591 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 4094255 SAMN07197217 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675591 22827 SRR5675592 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 13665110 SAMN07197214 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675592 22828 SRR5675593 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 24826961 SAMN07197215 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675593 22851 SRR5675616 AMPLICON PRJNA389390 Seagrass 54.55705 N 13.13677 E Germany:Baltic Sea 2015-08 Zostera marina seawater 20353364 SAMN07197192 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675616 22852 SRR5675617 AMPLICON PRJNA389390 Seagrass 54.55705 N 13.13677 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10156763 SAMN07197193 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675617 22853 SRR5675618 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 38210475 SAMN07197188 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675618 22854 SRR5675619 AMPLICON PRJNA389390 Seagrass 54.55705 N 13.13677 E Germany:Baltic Sea 2015-08 Zostera marina seawater 36711782 SAMN07197189 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675619 22855 SRR5675620 AMPLICON PRJNA389390 Seagrass 54.55705 N 13.13677 E Germany:Baltic Sea 2015-08 Zostera marina seawater 21510332 SAMN07197190 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675620 22857 SRR5675622 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 44484443 SAMN07197184 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675622 22858 SRR5675623 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 34652334 SAMN07197185 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675623 22859 SRR5675624 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 20173631 SAMN07197186 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675624 22860 SRR5675625 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 32378579 SAMN07197187 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675625 16656 SRR9593120 AMPLICON PRJNA550512 Mangrove 6.8487778 N 101.00833 E Thailand 2017/12/04 Mud estuarine mud 99978713 SAMN12124989 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593120