# Export date: 2026-06-15 01:58:57 # Microbe: Nodularia Nodularia spumigena (ID: 7082) # Total amplicons: 53 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21660 ERR12080773 AMPLICON PRJEB66381 Saltmarsh 53.7619302N 7.71609E 2019-07-15 salt marsh sediment 34473262 SAMEA114446211 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080773 19678 SRR10092810 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 10756105 SAMN12716529 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092810 19680 SRR10092812 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 41076044 SAMN12716527 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092812 19685 SRR10092817 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 1128631 SAMN12716522 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092817 19692 SRR10092824 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 5022768 SAMN12716516 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092824 19693 SRR10092825 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 1804261 SAMN12716515 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092825 21360 SRR11232912 AMPLICON PRJNA602775 Saltmarsh 41.7122N 69.9947W USA: Harwich\, MA Muddy Creek Marsh 2017-06 sediment 15641906 SAMN13950613 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11232912 20824 SRR11232927 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9956W USA: Harwich\, MA Muddy Creek Marsh 2017-06 sediment 18339272 SAMN13950599 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11232927 21381 SRR11233065 AMPLICON PRJNA602775 Saltmarsh 41.7129N 69.9956W USA: Harwich\, MA Muddy Creek Marsh 2016-06-30 sediment 23429655 SAMN13950663 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233065 21151 SRR11233066 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9956W USA: Harwich\, MA Muddy Creek Marsh 2016-06-30 sediment 23989051 SAMN13950662 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233066 20840 SRR11233068 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9957W USA: Harwich\, MA Muddy Creek Marsh 2016-06-30 sediment 24195589 SAMN13950661 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233068 21153 SRR11233069 AMPLICON PRJNA602775 Saltmarsh 41.123N 69.996W USA: Harwich\, MA Muddy Creek Marsh 2016-06-30 sediment 25656024 SAMN13950659 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233069 21154 SRR11233070 AMPLICON PRJNA602775 Saltmarsh 41.7122N 69.9947W USA: Harwich\, MA Muddy Creek Marsh 2015-06-07 sediment 20248913 SAMN13950658 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233070 21155 SRR11233071 AMPLICON PRJNA602775 Saltmarsh 41.7129N 69.9956W USA: Harwich\, MA Muddy Creek Marsh 2015-06-07 sediment 22324903 SAMN13950657 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233071 21156 SRR11233072 AMPLICON PRJNA602775 Saltmarsh 41.7124N 69.9959W USA: Harwich\, MA Muddy Creek Marsh 2016-06-30 sediment 22441148 SAMN13950660 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233072 21158 SRR11233074 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9957W USA: Harwich\, MA Muddy Creek Marsh 2015-06-07 sediment 20721481 SAMN13950655 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233074 21159 SRR11233075 AMPLICON PRJNA602775 Saltmarsh 41.7124N 69.9959W USA: Harwich\, MA Muddy Creek Marsh 2015-06-07 sediment 23974204 SAMN13950654 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233075 21160 SRR11233076 AMPLICON PRJNA602775 Saltmarsh 41.123N 69.996W USA: Harwich\, MA Muddy Creek Marsh 2015-06-07 sediment 20932634 SAMN13950653 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233076 21384 SRR11233079 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9956W USA: Harwich\, MA Muddy Creek Marsh 2016-08-25 sediment 19026150 SAMN13950650 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233079 20841 SRR11233081 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9957W USA: Harwich\, MA Muddy Creek Marsh 2016-08-25 sediment 18418866 SAMN13950649 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233081 20842 SRR11233082 AMPLICON PRJNA602775 Saltmarsh 41.7124N 69.9959W USA: Harwich\, MA Muddy Creek Marsh 2016-08-25 sediment 24208563 SAMN13950648 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233082 20843 SRR11233083 AMPLICON PRJNA602775 Saltmarsh 41.123N 69.996W USA: Harwich\, MA Muddy Creek Marsh 2016-08-25 sediment 19584803 SAMN13950647 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233083 20849 SRR11233098 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9948W USA: Harwich\, MA Muddy Creek Marsh 2016-07-26 sediment 17769213 SAMN13950546 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233098 20851 SRR11233100 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9948W USA: Harwich\, MA Muddy Creek Marsh 2017-06 sediment 55472641 SAMN13950545 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233100 20852 SRR11233101 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9957W USA: Harwich\, MA Muddy Creek Marsh 2015-11-04 sediment 13502414 SAMN13950544 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233101 20853 SRR11233103 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9957W USA: Harwich\, MA Muddy Creek Marsh 2016-10-12 sediment 7949486 SAMN13950542 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233103 21386 SRR11233104 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9957W USA: Harwich\, MA Muddy Creek Marsh 2017-08 sediment 20462341 SAMN13950541 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233104 20854 SRR11233105 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9957W USA: Harwich\, MA Muddy Creek Marsh 2017-07 sediment 16381420 SAMN13950540 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233105 21387 SRR11233110 AMPLICON PRJNA602775 Saltmarsh 41.7124N 69.9959W USA: Harwich\, MA Muddy Creek Marsh 2017-10-23 sediment 13019897 SAMN13950536 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233110 21389 SRR11233112 AMPLICON PRJNA602775 Saltmarsh 41.7124N 69.9959W USA: Harwich\, MA Muddy Creek Marsh 2017-07 sediment 17533360 SAMN13950533 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233112 20856 SRR11233113 AMPLICON PRJNA602775 Saltmarsh 41.7124N 69.9959W USA: Harwich\, MA Muddy Creek Marsh 2016-07-26 sediment 8103492 SAMN13950532 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233113 20857 SRR11233117 AMPLICON PRJNA602775 Saltmarsh 41.123N 69.996W USA: Harwich\, MA Muddy Creek Marsh 2015-11-04 sediment 18069639 SAMN13950530 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233117 20858 SRR11233118 AMPLICON PRJNA602775 Saltmarsh 41.123N 69.996W USA: Harwich\, MA Muddy Creek Marsh 2017-10-23 sediment 13961698 SAMN13950529 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233118 21193 SRR11233235 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2016-06-27 sediment 10882101 SAMN13950690 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233235 21400 SRR11233236 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9688W USA: Orleans\, MA marsh off of Crows Landing 2016-06-27 sediment 10660390 SAMN13950689 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233236 22035 SRR22025441 AMPLICON PRJNA893704 Saltmarsh 38.72246N 76.33719W USA: Chesapeake Bay 2019-06-28 Spartina alterniflora peat soil 92464530 SAMN31431889 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025441 22040 SRR22025447 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.36911W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 75468584 SAMN31431884 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025447 22073 SRR22025484 AMPLICON PRJNA893704 Saltmarsh 38.76089N 76.38416W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 60722179 SAMN31431850 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025484 22100 SRR23933743 AMPLICON PRJNA925448 Saltmarsh 44.616826N 67.802903W USA: Harrington\, Maine 2021-06-25 marsh sediment 135641404 SAMN33188457 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933743 21621 SRR26165206 AMPLICON PRJNA1019769 Saltmarsh USA:Delaware\,St Jones Reserve 2020 sediment 27129084 SAMN37494726 SINGLE Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR26165206 21626 SRR26165211 AMPLICON PRJNA1019769 Saltmarsh USA:Delaware\,St Jones Reserve 2020 sediment 8113826 SAMN37494723 SINGLE Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR26165211 22240 SRR27176422 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 25201900 SAMN38763984 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176422 21663 SRR5360888 AMPLICON PRJNA379357 Saltmarsh 53.76202N 7.7222E Germany: Spiekeroog 2015 Salt marsh sediment 103372987 SAMN06606350 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360888 21686 SRR5360914 AMPLICON PRJNA379357 Saltmarsh 53.76205N 7.7234E Germany: Spiekeroog 2015 Salt marsh sediment 115035163 SAMN06606324 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360914 21692 SRR5360921 AMPLICON PRJNA379357 Saltmarsh 53.76226N 7.72227E Germany: Spiekeroog 2015 Salt marsh sediment 140249245 SAMN06606317 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360921 21700 SRR5360930 AMPLICON PRJNA379357 Saltmarsh 53.76209N 7.72294E Germany: Spiekeroog 2015 Salt marsh sediment 145775568 SAMN06606308 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360930 21701 SRR5360931 AMPLICON PRJNA379357 Saltmarsh 53.76195N 7.72287E Germany: Spiekeroog 2015 Salt marsh sediment 157372512 SAMN06606307 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360931 21704 SRR5360934 AMPLICON PRJNA379357 Saltmarsh 53.76192N 7.72321E Germany: Spiekeroog 2015 Salt marsh sediment 151419638 SAMN06606304 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360934 21706 SRR5360936 AMPLICON PRJNA379357 Saltmarsh 53.76205N 7.7234E Germany: Spiekeroog 2015 Salt marsh sediment 126771648 SAMN06606302 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360936 22808 SRR5675573 AMPLICON PRJNA389390 Seagrass 54.61305 N 13.17829 E Germany:Baltic Sea 2015-08 Zostera marina seawater 16796799 SAMN07197206 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675573 22853 SRR5675618 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 38210475 SAMN07197188 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675618 22857 SRR5675622 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 44484443 SAMN07197184 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675622 22860 SRR5675625 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 32378579 SAMN07197187 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675625