# Export date: 2026-06-12 07:54:55 # Microbe: Geobacter psychrophilus (ID: 7277) # Total amplicons: 46 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19800 SRR10092932 AMPLICON PRJNA564581 Seaweed 44.04916667N 144.25777778E Japan 2016/09/14 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 35671557 SAMN12716396 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092932 14928 SRR12400125 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 97654572 SAMN15718360 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400125 21205 SRR12852711 AMPLICON PRJNA670253 Saltmarsh 29.755N 85.00333W USA: Apalachicola\, FL 2018-06-20 sediment 80581393 SAMN16490921 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852711 20917 SRR12852739 AMPLICON PRJNA670253 Saltmarsh 37.52944N 76.88694W USA: Gloucester Point\, VA 2018-06-29 sediment 11339285 SAMN16490896 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852739 21218 SRR12852745 AMPLICON PRJNA670253 Saltmarsh 37.52944N 76.88694W USA: Gloucester Point\, VA 2018-06-29 sediment 2831972 SAMN16490891 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852745 20949 SRR12852805 AMPLICON PRJNA670253 Saltmarsh 31.33944N 81.46722W USA: Darien\, GA 2018-06-23 sediment 23847557 SAMN16490836 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852805 21238 SRR12852806 AMPLICON PRJNA670253 Saltmarsh 31.33944N 81.46722W USA: Darien\, GA 2018-06-23 sediment 68873090 SAMN16490835 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852806 21240 SRR12852811 AMPLICON PRJNA670253 Saltmarsh 31.33944N 81.46722W USA: Darien\, GA 2018-06-23 sediment 6878599 SAMN16490831 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852811 22094 SRR23933687 AMPLICON PRJNA925448 Saltmarsh 44.570643N 67.912657W USA: Cherryfield\, Maine 2021-06-24 marsh sediment 34360896 SAMN33188433 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933687 22098 SRR23933740 AMPLICON PRJNA925448 Saltmarsh 44.570643N 67.912657W USA: Cherryfield\, Maine 2021-06-24 marsh sediment 35027050 SAMN33188459 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933740 22103 SRR23933820 AMPLICON PRJNA925448 Saltmarsh 44.616826N 67.802903W USA: Harrington\, Maine 2021-07-20 marsh sediment 10628846 SAMN33188474 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933820 22153 SRR27176325 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 58677090 SAMN38763948 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176325 22177 SRR27176353 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 48773906 SAMN38763892 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176353 22179 SRR27176355 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal typha marsh soil 79931246 SAMN38763864 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176355 22180 SRR27176357 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 43669804 SAMN38763889 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176357 22184 SRR27176361 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 41336854 SAMN38763885 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176361 22201 SRR27176380 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 24656488 SAMN38763993 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176380 22248 SRR27176432 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 27659878 SAMN38763961 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176432 22250 SRR27176434 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 39787594 SAMN38763959 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176434 22252 SRR27176436 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 58216540 SAMN38763957 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176436 22254 SRR27176438 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 69628516 SAMN38763955 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176438 22294 SRR28820972 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-22 salt marsh soil 15707986 SAMN41100861 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820972 22295 SRR28820973 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-22 salt marsh soil 24500798 SAMN41100860 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820973 22297 SRR28820975 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-11 salt marsh soil 72849224 SAMN41100773 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820975 22304 SRR28820982 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-11 salt marsh soil 59964618 SAMN41100767 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820982 22329 SRR28821011 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-22 salt marsh soil 168201810 SAMN41100855 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821011 22332 SRR28821016 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-22 salt marsh soil 68112688 SAMN41100850 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821016 22334 SRR28821019 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-06 salt marsh soil 53671310 SAMN41100731 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821019 22341 SRR28821027 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-14 salt marsh soil 81307324 SAMN41100813 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821027 22358 SRR28821080 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-16 salt marsh soil 143417470 SAMN41100836 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821080 22365 SRR28821104 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-09 salt marsh soil 26519906 SAMN41100743 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821104 22367 SRR28821106 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-02-01 salt marsh soil 72755914 SAMN41100957 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821106 22368 SRR28821107 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-02-01 salt marsh soil 35774452 SAMN41100956 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821107 22376 SRR28821116 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-06 salt marsh soil 61045810 SAMN41100741 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821116 22379 SRR28821119 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-19 salt marsh soil 173778136 SAMN41100917 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821119 22381 SRR28821121 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-19 salt marsh soil 27037024 SAMN41100915 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821121 22387 SRR28821128 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-05 salt marsh soil 113315664 SAMN41100908 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821128 22822 SRR5675587 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 24860409 SAMN07197221 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675587 22873 SRR5675638 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 49184400 SAMN07197238 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675638 22875 SRR5675640 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 78459421 SAMN07197240 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675640 22877 SRR5675642 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 21944957 SAMN07197234 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675642 22886 SRR5675651 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 66503722 SAMN07197244 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675651 15859 SRR5814402 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 65923215 SAMN07338396 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814402 21057 SRR8931065 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:05:00Z soil 24812258 SAMN11465916 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931065 21068 SRR8931077 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:20:00Z soil 23912331 SAMN11465910 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931077 16619 SRR9593083 AMPLICON PRJNA550512 Mangrove 6.8948333 N 100.991777 E Thailand 2017/12/04 Mud estuarine mud 51559089 SAMN12124968 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593083