# Export date: 2026-06-15 10:34:01 # Microbe: Desulfocella Desulfocella halophila (ID: 7305) # Total amplicons: 31 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 20558 SRR12125031 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 42043493 SAMN15414948 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125031 21426 SRR12995227 AMPLICON PRJNA666636 Saltmarsh 31.97338N 81.03055W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 45137832 SAMN16678409 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995227 21459 SRR12995266 AMPLICON PRJNA666636 Saltmarsh 31.38866N 81.27693W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 39567640 SAMN16678247 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995266 21582 SRR12995401 AMPLICON PRJNA666636 Saltmarsh 31.38913N 81.2776W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 45234216 SAMN16678326 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995401 21583 SRR12995402 AMPLICON PRJNA666636 Saltmarsh 31.38894N 81.27755W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 42313078 SAMN16678325 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995402 17649 SRR14181415 AMPLICON PRJNA720541 Mangrove 22.3404 N 39.0896 E Saudi Arabia:Thuwal 2018/10/01 Mangrove sediment/soil 90301776 SAMN18661247 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14181415 15720 SRR14741410 AMPLICON PRJNA735404 Mangrove 5.752590 N 102.999397 E Malaysia: Redang 2017/03/07 Sonneratia alba and Avicennia alba Sediment 62772000 SAMN19581473 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741410 15722 SRR14741412 AMPLICON PRJNA735404 Mangrove 5.752590 N 102.999397 E Malaysia: Redang 2017/03/07 Sonneratia alba and Avicennia alba Sediment 65469600 SAMN19581471 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741412 19027 SRR17136261 AMPLICON PRJNA786350 Mangrove 22.3270 N 39.0919 E Saudi Arabia:Thuwal 2018/12/16 Avicennia marina sediment/soil 90301776 SAMN23668672 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17136261 18892 SRR18349717 AMPLICON PRJNA817083 Mangrove 25.42 N 67.1 E Pakistan: Lasbela 2019/01/12 Mangrove mangrove sediments 123807601 SAMN26747222 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349717 17953 SRR18808566 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/02/17 Mangrove sediment 36197544 SAMN26511769 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18808566 18223 SRR25047336 AMPLICON PRJNA988256 Mangrove 1.4459 N 103.7078 E Singapore: Lim Chu Kang 2021/07/28 seawater seawater 55803594 SAMN36011563 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047336 18235 SRR25047348 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 seawater seawater 63402640 SAMN36011520 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047348 18236 SRR25047349 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 seawater seawater 69108396 SAMN36011519 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047349 18237 SRR25047350 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 seawater seawater 82082700 SAMN36011518 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047350 18274 SRR25047387 AMPLICON PRJNA988256 Mangrove 1.2155 N 103.8320 E Singapore: Small Sister's Island 2021/08/12 seawater seawater 54468960 SAMN36011710 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047387 18370 SRR25047483 AMPLICON PRJNA988256 Mangrove 1.4459 N 103.7078 E Singapore: Lim Chu Kang 2021/07/28 sediment sediment 63175084 SAMN36011559 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047483 18556 SRR27644649 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 12378980 SAMN39505441 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644649 18633 SRR27644726 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 16321590 SAMN39505400 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644726 18667 SRR27644760 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 13225486 SAMN39505312 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644760 21998 SRR5486621 AMPLICON PRJNA384656 Saltmarsh 41.6249N 71.3228W USA:Rhode Island\,Prudence Island 2010-10-25 salt marsh tidal mudflat 64020060 SAMN06843675 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486621 22007 SRR5486630 AMPLICON PRJNA384656 Saltmarsh 41.6249N 71.3228W USA:Rhode Island\,Prudence Island 2010-10-25 salt marsh tidal mudflat 71080690 SAMN06843665 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486630 22009 SRR5486632 AMPLICON PRJNA384656 Saltmarsh 41.6249N 71.3228W USA:Rhode Island\,Prudence Island 2010-10-25 salt marsh tidal mudflat 46390322 SAMN06843663 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486632 16198 SRR5878973 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 52449618 SAMN06834661 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5878973 16279 SRR5879054 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 28429231 SAMN06834640 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5879054 16545 SRR5886467 AMPLICON PRJNA339628 Mangrove 22.20 N 39.5 E Saudi Arabia: KAUST 2025/03/16 Mangrove Sediment 126173503 SAMN06834593 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5886467 16555 SRR5886477 AMPLICON PRJNA339628 Mangrove 22.20 N 39.5 E Saudi Arabia: KAUST 2025/03/16 Mangrove Sediment 150132734 SAMN06834562 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5886477 21889 SRR6371059 AMPLICON PRJNA422172 Saltmarsh 37.78N 119.09E China 2017-10-04 Salt marsh soils 30598456 SAMN08166678 PAIRED Illumina MiniSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR6371059 17383 SRR7585510 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove Sediment 59012702 SAMN09700157 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585510 17433 SRR7585560 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/08/17 Mangrove Sediment 13422125 SAMN09700018 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585560 17507 SRR7585634 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/02/17 Mangrove Sediment 36197544 SAMN09700125 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585634