# Export date: 2026-06-13 01:03:08 # Microbe: Desulfobacterium_B Desulfobacterium_B autotrophicum (ID: 7317) # Total amplicons: 39 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 20710 SRR13380065 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2016-07 Salt marsh sediment 19748282 SAMN17251795 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380065 23718 SRR15068628 AMPLICON PRJNA744715 Seagrass 37.2 N 122.34 E China:Weihai 2019-06 Zostera japonica sediment 288410699 SAMN20115028 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15068628 22401 SRR17216887 AMPLICON PRJNA788471 Saltmarsh 41.59N 70.639W USA: Massachusetts 2018-05 sediment 7878946 SAMN24002237 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR17216887 22402 SRR17216888 AMPLICON PRJNA788471 Saltmarsh 43.125N 70.868W USA: New Hampshire 2018-07 sediment 7878997 SAMN24002236 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR17216888 22405 SRR17216891 AMPLICON PRJNA788471 Saltmarsh 41.59N 70.639W USA: Massachusetts 2018-05 sediment 7882314 SAMN24002233 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR17216891 24354 SRR25047686 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 53359474 SAMN36015139 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047686 24359 SRR25047728 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 43480654 SAMN36015129 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047728 24360 SRR25047729 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere oxic area 35112252 SAMN36015152 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047729 24361 SRR25047730 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere oxic area 46129454 SAMN36015151 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047730 24363 SRR25047732 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere oxic area 24119130 SAMN36015150 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047732 24364 SRR25047733 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 54817518 SAMN36015149 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047733 24372 SRR25047741 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 55459852 SAMN36015143 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047741 24378 SRR25047761 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-12-18 Zostera marina rhizosphere bulk sediment 59384290 SAMN36015173 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047761 24381 SRR25047764 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-12-18 Zostera marina rhizosphere high hydrogen sulphide area 48864942 SAMN36015170 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047764 24384 SRR25047767 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-12-18 Zostera marina rhizosphere bulk sediment 39266654 SAMN36015167 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047767 24388 SRR25047771 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-12-18 Zostera marina rhizosphere high hydrogen sulphide area 54390098 SAMN36015164 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047771 24389 SRR25047772 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-12-18 Zostera marina rhizosphere high hydrogen sulphide area 46873526 SAMN36015163 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047772 24391 SRR25047774 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-12-11 Zostera marina rhizosphere bulk sediment 37618980 SAMN36015161 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047774 24394 SRR25047777 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere bulk sediment 45472070 SAMN36015159 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047777 24396 SRR25047779 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere bulk sediment 52062766 SAMN36015157 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047779 24398 SRR25047781 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere high hydrogen sulphide area 39458692 SAMN36015156 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047781 24399 SRR25047782 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere high hydrogen sulphide area 43385538 SAMN36015155 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047782 24401 SRR25047784 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere oxic area 37351692 SAMN36015153 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047784 22848 SRR5675613 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 37416392 SAMN07197228 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675613 21908 SRR6398154 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38373W USA 2013-07-07 Salt marsh sediment 9031955 SAMN08214118 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398154 21917 SRR6398163 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.3837603W USA 2013-07-07 Salt marsh sediment 2443043 SAMN08214135 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398163 21926 SRR6398173 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.383767W USA 2013-07-07 Salt marsh sediment 5812892 SAMN08214130 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398173 21940 SRR6398188 AMPLICON PRJNA423244 Saltmarsh 41.35171N 70.38376W USA 2013-07-07 Salt marsh sediment 13962225 SAMN08214113 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398188 21942 SRR6398190 AMPLICON PRJNA423244 Saltmarsh 41.351771N 70.38376W USA 2013-07-07 Salt marsh sediment 11885317 SAMN08214107 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398190 21069 SRR8931820 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 39915024 SAMN11463473 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931820 21083 SRR8931836 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 6962740 SAMN11463533 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931836 21097 SRR8931851 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 39815628 SAMN11463476 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931851 21102 SRR8931857 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 66973828 SAMN11463527 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931857 21104 SRR8931859 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 33385008 SAMN11463483 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931859 21112 SRR8931870 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 15315016 SAMN11463482 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931870 21117 SRR8931876 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 6553108 SAMN11463534 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931876 21126 SRR8931885 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 30892578 SAMN11463481 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931885 21131 SRR8931891 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 20340036 SAMN11463479 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931891 20900 SRR9597789 AMPLICON PRJNA551237 Saltmarsh 40.618433N 73.834383W USA:New York\,Jamaica Bay 2015-07 Salt marsh sediment 1724128352 SAMN12142399 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR9597789