# Export date: 2026-06-15 08:49:21 # Microbe: Desulfofaba_459360 Desulfofaba gelida (ID: 7332) # Total amplicons: 43 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22481 DRR403396 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass root 82588388 SAMD00532482 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403396 22578 ERR7421920 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 22564987 SAMEA11293297 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421920 22633 ERR7421975 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 28429761 SAMEA11293352 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421975 22643 ERR7421985 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 10089196 SAMEA11293362 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421985 22680 ERR7422022 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 21333092 SAMEA11293399 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7422022 23254 SRR10559716 AMPLICON PRJNA592571 Seagrass 22.377 N 39.129 E Saudi Arabia 2017-03 seagrass sediment 172094467 SAMN13429909 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10559716 23158 SRR11244467 AMPLICON PRJNA574590 Seagrass 20.15995 N 40.216967 E Saudi Arabia 2016-02-26 Thalassia hemprichii root 130978918 SAMN12860641 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11244467 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 23660 SRR12086847 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 367184384 SAMN15364569 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086847 23717 SRR15068627 AMPLICON PRJNA744715 Seagrass 37.2 N 122.34 E China:Weihai 2019-06 Zostera japonica sediment 262903024 SAMN20115029 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15068627 23725 SRR15068635 AMPLICON PRJNA744715 Seagrass 37.2 N 122.34 E China:Weihai 2019-06 Degradation sediment 489774366 SAMN20115048 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15068635 23732 SRR15068642 AMPLICON PRJNA744715 Seagrass 37.2 N 122.34 E China:Weihai 2019-06 Zostera japonica sediment 602979029 SAMN20115024 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15068642 17672 SRR23961222 AMPLICON PRJNA774281 Mangrove 25.1005098 N 80.43914361 W USA: Florida Keys\, Florida 1905/07/06 Mangrove plant matter 43825493 SAMN33844850 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23961222 17673 SRR23961223 AMPLICON PRJNA774281 Mangrove 25.1005098 N 80.43914361 W USA: Florida Keys\, Florida 1905/07/06 Mangrove plant matter 38748640 SAMN33844850 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23961223 18200 SRR25047313 AMPLICON PRJNA988256 Mangrove 1.2257 N 103.7464 E Singapore: Pulau Hantu Besar 2021/09/14 plastic plastic 71638602 SAMN36011584 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047313 18226 SRR25047339 AMPLICON PRJNA988256 Mangrove 1.2592 N 103.7564 E Singapore: Cyrene Reef 2021/08/23 sediment sediment 57907584 SAMN36011528 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047339 18227 SRR25047340 AMPLICON PRJNA988256 Mangrove 1.2592 N 103.7564 E Singapore: Cyrene Reef 2021/08/23 sediment sediment 61422662 SAMN36011527 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047340 18234 SRR25047347 AMPLICON PRJNA988256 Mangrove 1.2592 N 103.7564 E Singapore: Cyrene Reef 2021/08/23 plastic plastic 53224626 SAMN36011521 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047347 18256 SRR25047369 AMPLICON PRJNA988256 Mangrove 1.3166 N 103.9834 E Singapore: Tanah Merah 2021/07/13 plastic plastic 54674242 SAMN36011726 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047369 18722 SRR27798512 AMPLICON PRJNA1071512 Mangrove 48.831 N 126.483 W Canada: Clayoquot slope 2019/09/28 sediments from the Northeast Subarctic Pacific continental margin sediment 23233588 SAMN39692023 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27798512 18726 SRR27798516 AMPLICON PRJNA1071512 Mangrove 48.831 N 126.483 W Canada: Clayoquot slope 2019/09/28 sediments from the Northeast Subarctic Pacific continental margin sediment 24218460 SAMN39692021 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27798516 16841 SRR28031521 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 40207200 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031521 21663 SRR5360888 AMPLICON PRJNA379357 Saltmarsh 53.76202N 7.7222E Germany: Spiekeroog 2015 Salt marsh sediment 103372987 SAMN06606350 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360888 15857 SRR5814399 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 42190166 SAMN07338369 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814399 16472 SRR5886394 AMPLICON PRJNA339628 Mangrove 22.20 N 39.5 E Saudi Arabia: KAUST 2025/03/16 Mangrove Sediment 56983509 SAMN06834504 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5886394 17450 SRR7585577 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/02/17 Mangrove Sediment 27191286 SAMN09700104 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585577 21752 SRR7877436 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-08-01 Salt marsh sediment 58060965 SAMN10092116 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877436 16615 SRR9593079 AMPLICON PRJNA550512 Mangrove 6.8948333 N 100.991777 E Thailand 2018/04/01 Mud estuarine mud 49673722 SAMN12124969 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593079 16616 SRR9593080 AMPLICON PRJNA550512 Mangrove 6.8948333 N 100.991777 E Thailand 2018/04/01 Mud estuarine mud 46707330 SAMN12124969 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593080 16621 SRR9593085 AMPLICON PRJNA550512 Mangrove 6.8948333 N 100.991777 E Thailand 2018/04/01 Mud estuarine mud 64678702 SAMN12124969 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593085 16622 SRR9593086 AMPLICON PRJNA550512 Mangrove 6.8948333 N 100.991777 E Thailand 2017/12/04 Mud estuarine mud 88331429 SAMN12124968 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593086 16624 SRR9593088 AMPLICON PRJNA550512 Mangrove 6.8878333 N 101.01066 E Thailand 2017/12/04 Mud estuarine mud 41065685 SAMN12124971 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593088 16631 SRR9593095 AMPLICON PRJNA550512 Mangrove 6.9054167 N 101.241611 E Thailand 2018/04/01 Mud estuarine mud 74127312 SAMN12124981 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593095 16632 SRR9593096 AMPLICON PRJNA550512 Mangrove 6.9054167 N 101.241611 E Thailand 2018/04/01 Mud estuarine mud 50993921 SAMN12124981 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593096 16634 SRR9593098 AMPLICON PRJNA550512 Mangrove 6.8328889 N 101.000333 E Thailand 2018/04/01 Mud estuarine mud 20503845 SAMN12124993 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593098 16646 SRR9593110 AMPLICON PRJNA550512 Mangrove 6.8878333 N 101.01066 E Thailand 2018/04/01 Mud estuarine mud 50024528 SAMN12124972 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593110 16647 SRR9593111 AMPLICON PRJNA550512 Mangrove 6.8878333 N 101.01066 E Thailand 2018/04/01 Mud estuarine mud 69234680 SAMN12124972 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593111 16650 SRR9593114 AMPLICON PRJNA550512 Mangrove 6.8878336 N 101.01066 E Thailand 2017/12/04 Mud estuarine mud 76247085 SAMN12124971 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593114 16654 SRR9593118 AMPLICON PRJNA550512 Mangrove 6.89094 N 101.004166 E Thailand 2017/12/04 Mud estuarine mud 26803631 SAMN12124974 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593118 16680 SRR9593144 AMPLICON PRJNA550512 Mangrove 6.89094 N 101.004166 E Thailand 2018/04/01 Mud estuarine mud 33876893 SAMN12124975 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593144 16682 SRR9593146 AMPLICON PRJNA550512 Mangrove 6.89094 N 101.004166 E Thailand 2017/12/04 Mud estuarine mud 168612860 SAMN12124974 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593146 16683 SRR9593147 AMPLICON PRJNA550512 Mangrove 6.89094 N 101.004166 E Thailand 2018/04/01 Mud estuarine mud 52471313 SAMN12124975 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593147 20900 SRR9597789 AMPLICON PRJNA551237 Saltmarsh 40.618433N 73.834383W USA:New York\,Jamaica Bay 2015-07 Salt marsh sediment 1724128352 SAMN12142399 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR9597789