# Export date: 2026-06-12 19:24:43 # Microbe: Desulfosarcina Desulfosarcina variabilis (ID: 7350) # Total amplicons: 62 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22519 ERR2888351 AMPLICON PRJEB29670 Seagrass 3.808319 S 39.831288 E 2016-05-04 Enhalus acoroides root 29007661 SAMEA5079741 SINGLE Ion Torrent PGM METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2888351 20882 SRR11233218 AMPLICON PRJNA602775 Saltmarsh 41.7117N 69.9954W USA: Harwich\, MA Muddy Creek Marsh 2017-06 sediment 10216374 SAMN13950563 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233218 23326 SRR11249256 AMPLICON PRJNA610593 Seagrass 19.270667 N 40.898117 E Saudi Arabia 2016-02 Thalassia hemprichii root 9012080854 SAMN14306712 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11249256 23435 SRR11742123 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-06-29 seagrass sediment 22783981 SAMN14819971 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742123 23447 SRR11742135 AMPLICON PRJNA630066 Seagrass 29.9276 N 88.82931 W USA: Chandeleur Islands\, Lousiana 2015-07-01 seagrass sediment 20269436 SAMN14819960 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742135 23449 SRR11742137 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-07-02 seagrass sediment 25119121 SAMN14819958 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742137 23453 SRR11742141 AMPLICON PRJNA630066 Seagrass 29.93338 N 88.82949 W USA: Chandeleur Islands\, Lousiana 2015-09-23 seagrass sediment 26007700 SAMN14819955 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742141 23457 SRR11742145 AMPLICON PRJNA630066 Seagrass 29.93338 N 88.82949 W USA: Chandeleur Islands\, Lousiana 2015-09-22 seagrass sediment 30000572 SAMN14819951 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742145 23460 SRR11742148 AMPLICON PRJNA630066 Seagrass 29.93338 N 88.82949 W USA: Chandeleur Islands\, Lousiana 2015-09-22 seagrass sediment 53908374 SAMN14819948 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742148 23466 SRR11742154 AMPLICON PRJNA630066 Seagrass 29.93338 N 88.82949 W USA: Chandeleur Islands\, Lousiana 2015-09-23 seagrass sediment 33765573 SAMN14819943 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742154 23484 SRR11742172 AMPLICON PRJNA630066 Seagrass 29.9276 N 88.82931 W USA: Chandeleur Islands\, Lousiana 2015-09-22 seagrass sediment 28507523 SAMN14819926 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742172 23489 SRR11742177 AMPLICON PRJNA630066 Seagrass 29.9276 N 88.82931 W USA: Chandeleur Islands\, Lousiana 2015-09-23 seagrass sediment 38231469 SAMN14819922 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742177 23495 SRR11742183 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 24474836 SAMN14819916 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742183 23498 SRR11742186 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 59819285 SAMN14819914 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742186 23514 SRR11742202 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 49800412 SAMN14819899 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742202 23519 SRR11742207 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 21762436 SAMN14819895 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742207 23521 SRR11742209 AMPLICON PRJNA630066 Seagrass 29.86375 N 88.84147 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 16733029 SAMN14819893 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742209 23658 SRR12086845 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Spartina alterniflora sediment 304752972 SAMN15364579 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086845 21448 SRR12995252 AMPLICON PRJNA666636 Saltmarsh 31.38913N 81.2776W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 42311572 SAMN16678260 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995252 21515 SRR12995330 AMPLICON PRJNA666636 Saltmarsh 31.9728N 81.03062W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 40081688 SAMN16678391 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995330 21549 SRR12995365 AMPLICON PRJNA666636 Saltmarsh 31.9744N 81.0308W USA: Georgia 2019-07-22 Sporobolus alterniflorus sediment 45445558 SAMN16678359 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995365 21564 SRR12995380 AMPLICON PRJNA666636 Saltmarsh 31.38904N 81.27569W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 41057074 SAMN16678345 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995380 21582 SRR12995401 AMPLICON PRJNA666636 Saltmarsh 31.38913N 81.2776W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 45234216 SAMN16678326 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995401 21313 SRR1756900 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 12921000 SAMN03283773 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756900 21316 SRR1756934 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 9902100 SAMN03283776 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756934 21326 SRR1756945 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 14329950 SAMN03283786 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756945 21333 SRR1756953 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 12138000 SAMN03283793 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756953 21342 SRR1756967 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 16668000 SAMN03283805 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756967 18884 SRR18349709 AMPLICON PRJNA817083 Mangrove 25.42 N 67.1 E Pakistan: Lasbela 2019/01/12 Mangrove mangrove sediments 141333343 SAMN26747209 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349709 18888 SRR18349713 AMPLICON PRJNA817083 Mangrove 25.42 N 67.1 E Pakistan: Lasbela 2019/11/16 Mangrove mangrove sediments 142597161 SAMN26747213 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349713 18892 SRR18349717 AMPLICON PRJNA817083 Mangrove 25.42 N 67.1 E Pakistan: Lasbela 2019/01/12 Mangrove mangrove sediments 123807601 SAMN26747222 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349717 18895 SRR18349720 AMPLICON PRJNA817083 Mangrove 25.42 N 67.1 E Pakistan: Lasbela 2019/11/16 Mangrove mangrove sediments 137254732 SAMN26747219 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349720 18896 SRR18349721 AMPLICON PRJNA817083 Mangrove 25.42 N 67.1 E Pakistan: Lasbela 2019/11/16 Mangrove mangrove sediments 100440737 SAMN26747218 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349721 18900 SRR18349725 AMPLICON PRJNA817083 Mangrove 25.42 N 67.1 E Pakistan: Lasbela 2019/11/16 Mangrove mangrove sediments 118245224 SAMN26747214 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349725 18902 SRR18349727 AMPLICON PRJNA817083 Mangrove Pakistan: Lasbela Mangrove mangrove sediments 128518742 SAMN26747204 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349727 24070 SRR19536314 AMPLICON PRJNA845084 Seagrass 35.47 S 138.29 E Australia: Lady bay\, South Australia 2019 Posidonia angustifolia roots 25794311 SAMN28854770 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19536314 24072 SRR19536316 AMPLICON PRJNA845084 Seagrass 35.47 S 138.29 E Australia: Lady bay\, South Australia 2019 Posidonia angustifolia fruit 27057523 SAMN28854768 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19536316 24077 SRR19536321 AMPLICON PRJNA845084 Seagrass 35.47 S 138.29 E Australia: Lady bay\, South Australia 2019 Posidonia angustifolia fruit 27684049 SAMN28854764 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19536321 24079 SRR19536323 AMPLICON PRJNA845084 Seagrass 35.47 S 138.29 E Australia: Lady bay\, South Australia 2019 Posidonia angustifolia fruit 20370477 SAMN28854762 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19536323 22047 SRR22025456 AMPLICON PRJNA893704 Saltmarsh 38.76196N 76.38418W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 93777494 SAMN31431875 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025456 24101 SRR23715687 AMPLICON PRJNA925291 Seagrass 33.065986 S 151.546557 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 88781899 SAMN33555431 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715687 24102 SRR23715688 AMPLICON PRJNA925291 Seagrass 33.066002 S 151.546549 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 182205649 SAMN33555432 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715688 24106 SRR23715692 AMPLICON PRJNA925291 Seagrass 33.109592 S 151.564149 E Australia: Sunshine 2020-09-07 Zostera muelleri Estuarine sediment 142962944 SAMN33555436 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715692 24113 SRR23715699 AMPLICON PRJNA925291 Seagrass 33.08947 S 151.549127 E Australia: Balcolyn 2020-09-08 Zostera muelleri Estuarine sediment 85996790 SAMN33555411 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715699 24114 SRR23715700 AMPLICON PRJNA925291 Seagrass 33.089491 S 151.549131 E Australia: Balcolyn 2020-09-08 Zostera muelleri Estuarine sediment 130826164 SAMN33555412 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715700 24115 SRR23715701 AMPLICON PRJNA925291 Seagrass 33.063239 S 151.55989 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 102695768 SAMN33555421 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715701 24121 SRR23715707 AMPLICON PRJNA925291 Seagrass 33.060987 S 151.553184 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 94966831 SAMN33555427 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715707 24123 SRR23715709 AMPLICON PRJNA925291 Seagrass 33.061019 S 151.553192 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 122803968 SAMN33555429 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715709 24124 SRR23715710 AMPLICON PRJNA925291 Seagrass 33.102465 S 151.56519 E Australia: Johnys Point 2020-09-08 Zostera muelleri Estuarine sediment 65523256 SAMN33555420 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715710 24127 SRR23715713 AMPLICON PRJNA925291 Seagrass 33.102475 S 151.565188 E Australia: Johnys Point 2020-09-08 Zostera muelleri Estuarine sediment 97530462 SAMN33555417 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715713 24128 SRR23715714 AMPLICON PRJNA925291 Seagrass 33.102494 S 151.565216 E Australia: Johnys Point 2020-09-08 Zostera muelleri Estuarine sediment 105100366 SAMN33555416 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715714 24129 SRR23715715 AMPLICON PRJNA925291 Seagrass 33.089426 S 151.549076 E Australia: Balcolyn 2020-09-08 Zostera muelleri Estuarine sediment 77420826 SAMN33555415 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715715 24130 SRR23715716 AMPLICON PRJNA925291 Seagrass 33.066674 S 151.580256 E Australia: Wangi Wangi 2020-09-10 Zostera muelleri Estuarine sediment 68518648 SAMN33555445 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715716 24131 SRR23715717 AMPLICON PRJNA925291 Seagrass 33.066702 S 151.580279 E Australia: Wangi Wangi 2020-09-10 Zostera muelleri Estuarine sediment 97767759 SAMN33555444 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715717 24133 SRR23715719 AMPLICON PRJNA925291 Seagrass 33.060974 S 151.553245 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 111556958 SAMN33555430 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715719 16855 SRR26222186 AMPLICON PRJNA1021532 Mangrove 15.2933 N 73.4958 E India 2020/08/05 Mangrove mangrove sediment 871077000 SAMN37558049 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222186 16976 SRR6200777 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 25477221 SAMN07813279 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200777 21800 SRR7877489 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-06-26 Salt marsh sediment 41555143 SAMN10092051 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877489 21851 SRR7877544 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-07-18 Salt marsh sediment 48567351 SAMN10092076 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877544 22735 SRR7907419 AMPLICON PRJNA342246 Seagrass 33.87225 S 151.262139 E Australia: New South Wales\, Rose Bay 2015-11-14 Zostera muelleri sediment 8311152 SAMN10135439 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7907419 22748 SRR7907432 AMPLICON PRJNA342246 Seagrass 33.158162 S 151.531905 E Australia: New South Wales\, Lake Macquarie 2015-10-24 Zostera muelleri Zostera muelleri 36206630 SAMN10135410 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7907432 21049 SRR8207368 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 14325172 SAMN10439463 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207368