# Export date: 2026-06-15 08:49:58 # Microbe: Clostridium_T Clostridium_T saccharobutylicum (ID: 7493) # Total amplicons: 68 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 23311 SRR10723731 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Xincun 2016-07-24 seagrass sediment 19716500 SAMN13567227 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723731 23312 SRR10723732 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Xincun 2016-07-24 seagrass sediment 22419500 SAMN13567226 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723732 23315 SRR10723735 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Xincun 2016-07-24 seagrass sediment 17250500 SAMN13567224 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723735 21388 SRR11233111 AMPLICON PRJNA602775 Saltmarsh 41.7124N 69.9959W USA: Harwich\, MA Muddy Creek Marsh 2016-10-12 sediment 7565013 SAMN13950535 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233111 15780 SRR11310748 AMPLICON PRJNA612579 Mangrove 21.5 N 111.01 E China: Dianbai 2019/04/25 mangrove mangrove soil 34879850 SAMN14377367 PAIRED Illumina MiniSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11310748 23335 SRR11354715 AMPLICON PRJNA613355 Seagrass 37.35 N 122.57 E China:Rongcheng 2019-06-10 Zostera japonica sediment 36694910 SAMN14404031 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11354715 23350 SRR11354730 AMPLICON PRJNA613355 Seagrass 37.35 N 122.57 E China:Rongcheng 2019-06-10 Zostera japonica sediment 42846748 SAMN14404017 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11354730 16593 SRR11392218 AMPLICON PRJNA613787 Mangrove 21.5 N 111.01 E China: Dianbai 2019/04/25 Mangrove mangrove soil 34879850 SAMN14419944 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11392218 23649 SRR12086836 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Spartina alterniflora sediment 460932328 SAMN15364575 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086836 23655 SRR12086842 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Degradation sediment sediment 119643554 SAMN15364582 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086842 23656 SRR12086843 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Spartina alterniflora sediment 300990431 SAMN15364581 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086843 23657 SRR12086844 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Spartina alterniflora sediment 311232884 SAMN15364580 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086844 14972 SRR12164902 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 99418125 SAMN15447430 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164902 14921 SRR12400118 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 92957645 SAMN15718367 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400118 14939 SRR12708819 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode enrichment reactor 20158500 SAMN16261225 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708819 21212 SRR12852728 AMPLICON PRJNA670253 Saltmarsh 37.415258N 76.714539W USA: Gloucester Point\, VA 2018-06-29 sediment 19891809 SAMN16490905 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852728 16738 SRR13291677 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root-associated soil 34879850 SAMN17075127 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291677 20734 SRR13380093 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 17673958 SAMN17251781 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380093 15131 SRR14740818 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba mangrove sediment 67216800 SAMN19581187 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740818 15176 SRR14740863 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 106847400 SAMN19581147 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740863 15178 SRR14740865 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 105283200 SAMN19581145 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740865 15183 SRR14740870 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Sediment 123038400 SAMN19581141 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740870 15219 SRR14740906 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Sediment 83034600 SAMN19581108 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740906 15221 SRR14740908 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Sediment 70894200 SAMN19581106 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740908 15247 SRR14740934 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 105391200 SAMN19581083 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740934 15250 SRR14740937 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 93231000 SAMN19581080 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740937 15633 SRR14741323 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Sediment 63721800 SAMN19581192 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741323 20520 SRR19745561 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 52423492 SAMN29155012 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745561 22037 SRR22025444 AMPLICON PRJNA893704 Saltmarsh 38.72246N 76.33719W USA: Chesapeake Bay 2019-06-28 Spartina alterniflora peat soil 97705169 SAMN31431886 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025444 22061 SRR22025471 AMPLICON PRJNA893704 Saltmarsh 38.74644N 76.36811W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 63737532 SAMN31431862 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025471 22074 SRR22025485 AMPLICON PRJNA893704 Saltmarsh 38.77079N 76.37722W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 67410558 SAMN31431849 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025485 22075 SRR22025486 AMPLICON PRJNA893704 Saltmarsh 38.77079N 76.37722W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 61314969 SAMN31431848 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025486 22079 SRR22025490 AMPLICON PRJNA893704 Saltmarsh 38.76607N 76.381W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 66201810 SAMN31431827 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025490 18027 SRR25728257 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 44892344 SAMN37055120 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728257 18030 SRR25728260 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574472 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 42929222 SAMN37055113 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728260 18031 SRR25728261 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 42340466 SAMN37055101 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728261 18034 SRR25728264 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 38856090 SAMN37055119 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728264 18036 SRR25728266 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574472 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 50035230 SAMN37055132 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728266 18037 SRR25728267 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574472 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 40939010 SAMN37055132 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728267 18043 SRR25728273 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574472 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 43489684 SAMN37055130 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728273 18044 SRR25728274 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574472 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 34807640 SAMN37055130 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728274 18047 SRR25728277 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.572972 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 44632280 SAMN37055103 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728277 18049 SRR25728279 AMPLICON PRJNA1007244 Mangrove 20.2445S 106.572611 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 36336720 SAMN37055125 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728279 18063 SRR25728293 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574444 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 44826124 SAMN37055111 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728293 18064 SRR25728294 AMPLICON PRJNA1007244 Mangrove 20.243083S 106.574472 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 40815600 SAMN37055112 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728294 18078 SRR25728308 AMPLICON PRJNA1007244 Mangrove 20.243583S 106.574444 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 43631154 SAMN37055128 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728308 18079 SRR25728309 AMPLICON PRJNA1007244 Mangrove 20.243583S 106.574444 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 50593886 SAMN37055129 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728309 18080 SRR25728310 AMPLICON PRJNA1007244 Mangrove 20.243583S 106.574444 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 41625892 SAMN37055127 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728310 18083 SRR25728313 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 41618668 SAMN37055120 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728313 18088 SRR25728318 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 37228884 SAMN37055118 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728318 18091 SRR25728321 AMPLICON PRJNA1007244 Mangrove 20.243389S 106.574778 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 33029332 SAMN37055117 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728321 18095 SRR25728325 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 44614822 SAMN37055101 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728325 18096 SRR25728326 AMPLICON PRJNA1007244 Mangrove 20.243389S 106.574778 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 39119164 SAMN37055116 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728326 18104 SRR25728334 AMPLICON PRJNA1007244 Mangrove 20.2445S 106.572611 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 9306920 SAMN37055108 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728334 18107 SRR25728337 AMPLICON PRJNA1007244 Mangrove 20.2445S 106.572611 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 50067738 SAMN37055107 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728337 18111 SRR25728341 AMPLICON PRJNA1007244 Mangrove 20.243389S 106.574778 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 45807986 SAMN37055135 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728341 18112 SRR25728342 AMPLICON PRJNA1007244 Mangrove 20.243389S 106.574778 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 42751030 SAMN37055135 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728342 18124 SRR25728354 AMPLICON PRJNA1007244 Mangrove 20.243389S 106.574778 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 45153612 SAMN37055134 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728354 18128 SRR25728358 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 43905666 SAMN37055100 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728358 18130 SRR25728360 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 48135318 SAMN37055100 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728360 22201 SRR27176380 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 24656488 SAMN38763993 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176380 22263 SRR27176448 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal juncus marsh soil 46666852 SAMN38763901 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176448 22356 SRR28821069 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-06 salt marsh soil 91440188 SAMN41100738 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821069 15858 SRR5814400 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 67587995 SAMN07338372 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814400 21286 SRR9089772 AMPLICON PRJNA543559 Saltmarsh 30.87N 121.94E China:Shanghai 2017-12 salt marsh soil 43452360 SAMN11774865 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089772 21287 SRR9089773 AMPLICON PRJNA543559 Saltmarsh 30.87N 121.94E China:Shanghai 2017-09 salt marsh soil 37057916 SAMN11774864 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089773 16612 SRR9593076 AMPLICON PRJNA550512 Mangrove 6.8328889 N 101.000333 E Thailand 2018/04/01 Mud estuarine mud 56355281 SAMN12124993 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593076 16628 SRR9593092 AMPLICON PRJNA550512 Mangrove 6.8487778 N 101.00833 E Thailand 2018/07/31 Mud estuarine mud 46298135 SAMN12124991 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593092