# Export date: 2026-06-15 12:35:43 # Microbe: Proteiniclasticum Proteiniclasticum ruminis_A (ID: 7500) # Total amplicons: 168 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21597 SRR10200251 AMPLICON PRJNA574840 Saltmarsh 29.895448N 88.82778W USA: Chandeleur Islands 2018-05-07 salt marsh sediment 34071500 SAMN12869873 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10200251 23311 SRR10723731 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Xincun 2016-07-24 seagrass sediment 19716500 SAMN13567227 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723731 23312 SRR10723732 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Xincun 2016-07-24 seagrass sediment 22419500 SAMN13567226 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723732 23183 SRR11244492 AMPLICON PRJNA574590 Seagrass 19.270667 N 40.898117 E Saudi Arabia 2016-02-28 Thalassia hemprichii Vegetated sediment 72550333 SAMN12860732 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11244492 16705 SRR11930142 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 Mangrove mangrove sediments 578528504 SAMN15143742 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930142 20624 SRR12228834 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 554476500 SAMN10953576 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228834 20626 SRR12228836 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 206085000 SAMN10953557 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228836 20630 SRR12228840 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 96120000 SAMN10953571 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228840 14921 SRR12400118 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 92957645 SAMN15718367 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400118 14924 SRR12400121 AMPLICON PRJNA650560 Mangrove 13.83679 S 39.2621 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 52601681 SAMN15718364 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400121 14925 SRR12400122 AMPLICON PRJNA650560 Mangrove 13.83679 S 39.2621 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 50799976 SAMN15718363 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400122 14927 SRR12400124 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 98301057 SAMN15718361 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400124 20726 SRR13380083 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 27399285 SAMN17251911 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380083 20766 SRR13380132 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 22852716 SAMN17251869 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380132 18977 SRR15734458 AMPLICON PRJNA760823 Mangrove 21.5769 N 88.2923 E India: West Bengal 2025/04/20 Suaeda monoica estuarine mud 1626754200 SAMN21236003 PAIRED Illumina Genome Analyzer METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15734458 18892 SRR18349717 AMPLICON PRJNA817083 Mangrove 25.42 N 67.1 E Pakistan: Lasbela 2019/01/12 Mangrove mangrove sediments 123807601 SAMN26747222 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349717 24085 SRR21686191 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass Bulk_soil 54272908 SAMN30916020 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686191 24088 SRR21686194 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass Bulk_soil 54534506 SAMN30916017 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686194 22045 SRR22025452 AMPLICON PRJNA893704 Saltmarsh 38.74663N 76.37007W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 98923003 SAMN31431879 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025452 22046 SRR22025455 AMPLICON PRJNA893704 Saltmarsh 38.76208N 76.38459W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 65723022 SAMN31431876 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025455 22109 SRR23933939 AMPLICON PRJNA925448 Saltmarsh 39.5056N 74.4268W USA: Galloway\, New Jersey 2021-06-25 marsh sediment 44360234 SAMN33188280 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933939 22110 SRR23933940 AMPLICON PRJNA925448 Saltmarsh 39.5056N 74.4268W USA: Galloway\, New Jersey 2021-06-24 marsh sediment 30295700 SAMN33188279 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933940 22117 SRR23933969 AMPLICON PRJNA925448 Saltmarsh 39.5056N 74.4268W USA: Galloway\, New Jersey 2021-06-25 marsh sediment 36101330 SAMN33188253 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933969 18362 SRR25047475 AMPLICON PRJNA988256 Mangrove 1.3802 N 103.9486 E Singapore: Pasir Ris Park 2021/08/13 plastic plastic 79446542 SAMN36011598 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047475 18123 SRR25728353 AMPLICON PRJNA1007244 Mangrove 20.2445S 106.572611 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 39741632 SAMN37055106 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728353 18129 SRR25728359 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 41232184 SAMN37055100 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728359 16856 SRR26222187 AMPLICON PRJNA1021532 Mangrove 15.2958 N 73.4911 E India 2020/08/05 Mangrove mangrove sediment 1049480500 SAMN37558048 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222187 20032 SRR4105465 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 48452036 SAMN05521713 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105465 20034 SRR4105467 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 32480404 SAMN05521715 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105467 17314 SRR5319008 AMPLICON PRJNA351850 Mangrove 22.12 N 88.99 E India: West Bengal 2015/08/01 fresh water surface water 111864132 SAMN06448880 PAIRED Illumina HiSeq 2000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5319008 17315 SRR5319009 AMPLICON PRJNA351850 Mangrove 22.08 N 88.76 E India: West Bengal 2015/08/01 fresh water surface water 149019156 SAMN06448879 PAIRED Illumina HiSeq 2000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5319009 17316 SRR5319010 AMPLICON PRJNA351850 Mangrove 22.88 N 88.57 E India: West Bengal 2015/08/01 fresh water surface water 140330140 SAMN06448878 PAIRED Illumina HiSeq 2000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5319010 16083 SRR5877326 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 101556560 SAMN06834391 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877326 16087 SRR5877330 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 50486974 SAMN06834442 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877330 16353 SRR5880115 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 50486974 SAMN06834442 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880115 16376 SRR5880138 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 101556560 SAMN06834391 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880138 22903 SRR6424044 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914474 E Taiwan 2015-02-15 seagrass root 46374468 SAMN08222587 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424044 22904 SRR6424045 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914476 E Taiwan 2015-02-15 seagrass rhizosphere 69284180 SAMN08222589 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424045 22905 SRR6424046 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914462 E Taiwan 2014-01-10 seagrass root 73679382 SAMN08222575 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424046 22906 SRR6424047 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914454 E Taiwan 2013-08-01 seagrass sediment 45845912 SAMN08222567 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424047 22909 SRR6424050 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.91446 E Taiwan 2014-01-10 seagrass sediment 59862278 SAMN08222573 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424050 22910 SRR6424051 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914472 E Taiwan 2015-02-15 seagrass sediment 76136746 SAMN08222585 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424051 22911 SRR6424052 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914468 E Taiwan 2014-08-30 seagrass root 57707118 SAMN08222581 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424052 22912 SRR6424053 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.91447 E Taiwan 2014-08-30 seagrass rhizosphere 54078864 SAMN08222583 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424053 22913 SRR6424054 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914464 E Taiwan 2014-01-10 seagrass rhizosphere 46673662 SAMN08222577 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424054 22914 SRR6424055 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914466 E Taiwan 2014-08-30 seagrass sediment 51884574 SAMN08222579 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424055 22976 SRR7550355 AMPLICON PRJNA482222 Seagrass 55.58 N 3.4 W United Kingdom: Scotland 2015-07 seagrass Sediment 104820959 SAMN09700800 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR7550355 21053 SRR8931061 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:00:00Z soil 23101600 SAMN11465915 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931061 21056 SRR8931064 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:10:00Z soil 23228396 SAMN11465917 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931064 21058 SRR8931066 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:20:00Z soil 21248346 SAMN11465919 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931066 21059 SRR8931067 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:15:00Z soil 25015794 SAMN11465918 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931067 21061 SRR8931069 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:25:00Z soil 25558565 SAMN11465920 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931069 16612 SRR9593076 AMPLICON PRJNA550512 Mangrove 6.8328889 N 101.000333 E Thailand 2018/04/01 Mud estuarine mud 56355281 SAMN12124993 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593076 16640 SRR9593104 AMPLICON PRJNA550512 Mangrove 6.9493889 N 100.826722 E Thailand 2018/04/01 Mud estuarine mud 53085658 SAMN12124978 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593104 20900 SRR9597789 AMPLICON PRJNA551237 Saltmarsh 40.618433N 73.834383W USA:New York\,Jamaica Bay 2015-07 Salt marsh sediment 1724128352 SAMN12142399 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR9597789 16754 SRR9894714 AMPLICON PRJNA558367 Mangrove 26.24057697 S 48.63787731 W Brazil: Santa Catarina 2025/12/15 Mangrove mangrove sediment 56212500 SAMN12444326 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9894714