# Export date: 2026-06-15 08:49:25 # Microbe: Roseburia (ID: 7548) # Total amplicons: 67 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 20024 SRR10030031 AMPLICON PRJNA562320 Seaweed 5.3642786N 100.3590184E Malaysia: Pulau Pinang\, Pulau Korea 2016/05/11 Gracilaria sp. Plant 72802000 SAMN12638441 PAIRED Illumina HiSeq 1000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10030031 20025 SRR10030032 AMPLICON PRJNA562320 Seaweed 5.6195748N 100.2949879E Malaysia: Kedah\, Kuala Muda 2016/05/10 Gracilaria sp. Plant 76830000 SAMN12638440 PAIRED Illumina HiSeq 1000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10030032 23308 SRR10723728 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Tanmen 2016-07-20 seagrass sediment 46906500 SAMN13567211 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723728 15790 SRR11310758 AMPLICON PRJNA612579 Mangrove 21.5 N 111.01 E China: Dianbai 2019/04/25 mangrove mangrove plant 39004572 SAMN14377379 PAIRED Illumina MiniSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR11310758 16597 SRR11392222 AMPLICON PRJNA613787 Mangrove 21.5 N 111.01 E China: Dianbai 2019/04/25 Mangrove mangrove plant 39004572 SAMN14419950 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11392222 16702 SRR11930139 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 985302685 SAMN15143745 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930139 23667 SRR12089225 AMPLICON PRJNA641835 Seagrass NA China:Hainan\,Xincun Thalassia hemperichii sediment 34869500 SAMN15367932 SINGLE Ion Torrent S5 XL GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12089225 23668 SRR12089226 AMPLICON PRJNA641835 Seagrass NA China:Hainan\,Xincun Thalassia hemperichii sediment 21516081 SAMN15367931 SINGLE Ion Torrent S5 XL GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12089226 14921 SRR12400118 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 92957645 SAMN15718367 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400118 14922 SRR12400119 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 84499999 SAMN15718366 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400119 14923 SRR12400120 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 94604080 SAMN15718365 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400120 14924 SRR12400121 AMPLICON PRJNA650560 Mangrove 13.83679 S 39.2621 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 52601681 SAMN15718364 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400121 14925 SRR12400122 AMPLICON PRJNA650560 Mangrove 13.83679 S 39.2621 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 50799976 SAMN15718363 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400122 14926 SRR12400123 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 91406705 SAMN15718362 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400123 14927 SRR12400124 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 98301057 SAMN15718361 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400124 14928 SRR12400125 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 97654572 SAMN15718360 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400125 14939 SRR12708819 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode enrichment reactor 20158500 SAMN16261225 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708819 14995 SRR13291651 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 39004572 SAMN17075151 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291651 16732 SRR13291654 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 40012288 SAMN17075148 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291654 18985 SRR13958805 AMPLICON PRJNA713958 Mangrove China: Hainan island 2025/12/17 Mangrove/intertidal mudflats mangrove forest and intertidal mudflats sediments 28822500 SAMN18275835 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13958805 14980 SRR15566179 AMPLICON PRJNA756333 Mangrove Malaysia:MRE 2025/12/19 Mangrove sediment 29496194 SAMN20864009 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15566179 14981 SRR15566180 AMPLICON PRJNA756333 Mangrove Malaysia:MRE 2025/12/19 Mangrove sediment 34472928 SAMN20864008 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15566180 14986 SRR15566185 AMPLICON PRJNA756333 Mangrove Malaysia:MRE 2025/12/19 Mangrove sediment 31836770 SAMN20864016 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15566185 14987 SRR15566186 AMPLICON PRJNA756333 Mangrove Malaysia:MRE 2025/12/19 Mangrove sediment 29096466 SAMN20864015 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15566186 14988 SRR15566187 AMPLICON PRJNA756333 Mangrove Malaysia:MRE 2025/12/19 Mangrove sediment 40854128 SAMN20864014 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15566187 14990 SRR15566189 AMPLICON PRJNA756333 Mangrove Malaysia:MRE 2025/12/19 Mangrove sediment 43271158 SAMN20864012 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15566189 14957 SRR15606927 AMPLICON PRJNA757625 Mangrove 22.5286 N 114.0028 E China 2025/05/20 Mangrove mangrove sidiments 45046456 SAMN20969823 PAIRED Illumina MiSeq OTHER 16S https://www.ncbi.nlm.nih.gov/sra/SRR15606927 24009 SRR19242039 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 51696500 SAMN28462888 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242039 24010 SRR19242040 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 51549000 SAMN28462887 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242040 24011 SRR19242041 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 49587000 SAMN28462886 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242041 24013 SRR19242043 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 49367000 SAMN28462884 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242043 24015 SRR19242045 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 53971500 SAMN28462882 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242045 24022 SRR19242052 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 51879500 SAMN28462876 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242052 24023 SRR19242053 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 51992500 SAMN28462875 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242053 24024 SRR19242054 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 49860000 SAMN28462874 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242054 24025 SRR19242055 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50681000 SAMN28462873 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242055 24026 SRR19242056 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50508000 SAMN28462872 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242056 24027 SRR19242057 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50421500 SAMN28462871 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242057 24028 SRR19242058 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50261000 SAMN28462870 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242058 24056 SRR19242086 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 45454500 SAMN28462845 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242086 24058 SRR19242088 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 33853000 SAMN28462843 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242088 24059 SRR19242089 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 36032000 SAMN28462842 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242089 24063 SRR19242093 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2020-08 seagrass seawater 33209500 SAMN28462830 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242093 24087 SRR21686193 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass Bulk_soil 54478336 SAMN30916018 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686193 24089 SRR21686195 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass Bulk_soil 59957042 SAMN30916016 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686195 24166 SRR23829621 AMPLICON PRJNA944167 Seagrass 2.28151 N 118.24449 E Indonesia: Derawan 2010-06 Syringodium isoetifolium plant 22162028 SAMN33739268 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829621 24179 SRR23829634 AMPLICON PRJNA944167 Seagrass 1.90526 S 123.08915 E Indonesia: Banggai 2010-07 Syringodium isoetifolium plant 25408012 SAMN33739220 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829634 24182 SRR23829637 AMPLICON PRJNA944167 Seagrass 8.26874 S 124.40135 E Indonesia: Alor 2011-06 Syringodium isoetifolium plant 31227546 SAMN33739191 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829637 24230 SRR23829685 AMPLICON PRJNA944167 Seagrass 8.26874 S 124.40135 E Indonesia: Alor 2011-06 Syringodium isoetifolium plant 34797406 SAMN33739201 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829685 24233 SRR23829688 AMPLICON PRJNA944167 Seagrass 5.87927 S 110.43198 E Indonesia: Karimunjawa 2011-08 Syringodium isoetifolium plant 30044014 SAMN33739315 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829688 24305 SRR23829760 AMPLICON PRJNA944167 Seagrass 8.26874 S 124.40135 E Indonesia: Alor 2011-06 Syringodium isoetifolium plant 27825644 SAMN33739200 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829760 18047 SRR25728277 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.572972 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 44632280 SAMN37055103 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728277 18089 SRR25728319 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 36128428 SAMN37055118 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728319 18128 SRR25728358 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 43905666 SAMN37055100 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728358 18130 SRR25728360 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 48135318 SAMN37055100 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728360 16855 SRR26222186 AMPLICON PRJNA1021532 Mangrove 15.2933 N 73.4958 E India 2020/08/05 Mangrove mangrove sediment 871077000 SAMN37558049 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222186 16856 SRR26222187 AMPLICON PRJNA1021532 Mangrove 15.2958 N 73.4911 E India 2020/08/05 Mangrove mangrove sediment 1049480500 SAMN37558048 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222187 17315 SRR5319009 AMPLICON PRJNA351850 Mangrove 22.08 N 88.76 E India: West Bengal 2015/08/01 fresh water surface water 149019156 SAMN06448879 PAIRED Illumina HiSeq 2000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5319009 16565 SRR5725177 AMPLICON PRJNA390570 Mangrove 15.52 N 73.90 E India: Goa 2015/02/05 Mangrove SOIL 34879196 SAMN06675417 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5725177 15856 SRR5814398 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 49235033 SAMN07338370 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814398 16120 SRR5877363 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 127043707 SAMN06834402 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877363 16416 SRR5880178 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 127043707 SAMN06834402 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880178 17028 SRR6200829 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 98023157 SAMN07813286 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200829 17046 SRR6200847 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 15762467 SAMN07813295 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200847 17052 SRR6200853 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 52669238 SAMN07813293 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200853 21284 SRR9089768 AMPLICON PRJNA543559 Saltmarsh 30.89N 121.97E China:Shanghai 2017-09 salt marsh soil 32382182 SAMN11774860 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089768 16656 SRR9593120 AMPLICON PRJNA550512 Mangrove 6.8487778 N 101.00833 E Thailand 2017/12/04 Mud estuarine mud 99978713 SAMN12124989 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593120